Ccot004752.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cyphomyrmex costatus
Gene Symbol
BTBD19
Assembly
GCA_001594065.1
Location
NW:1044422-1061043[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.6e-15 4.5e-13 48.7 0.0 4 107 36 138 33 141 0.91

Sequence Information

Coding Sequence
ATGGGAACTAGAGCTGTTGCCGTTGCGGCGGCGGCAGGTGCTGCTGGGATGTCTGGTGAAGCGGGATTGGCTGGTGTACCAAGACTGCTGGAGGATCTGGCACGACTCTCGGAGGATAAAGACTCGGCTGATATCGTGTTCCTACTAGGGAGAGACGAGACCCCTGTTTATGCCCACAGAATAATACTTCAAGCCAGaTGCAAGAATTTCACGGCAACCAAAAGGCTCGGCACAGCAGGTAATCCGACACCGGTACGAATGCCGCACGCGCATCCAGAAACGTTTCGCCAGTTTATTCGTTACATCTACACGGGTATGATAATACTACAAGATAGCGGGATTTTCGAAATGTTGGGTCTGGCTCAAGAACTTGGTATAGAAGAACTTTGGAGAAGTTGTGAGGAACACGTGTCTGTTACTTTAAGCCCTGGAAACGCGTGTGCACTTTTAACCGCTGCTTTGGAGGCCCAAGAACGAGTTCCAgGTGGGAAAACTGCTTGCTCATCCTTTATCGAAAAATGTTTTGCTTTCATCGGCGAGAATGCTATGGATACAGTGAAGACAACGGCTTTTTGCAATCTTCCAAAGGACGCTTTAGTGAAATTGATCTCGTCAGATTATCTGGGTTTGGAAGAAGAAGATGTATGGCGGGCGGTTCTAAATTGGGCCAAATATCAGgCAGGAGTTACGCAGCCTACACAGCACTGGACTGAAGAAGAGCGCATGAGAGTGTGCCAGCATTTGTCGGGTGTAATAAATCACGTACGATTGCTGTTGATCGATAGCCAGGTGTTTGCGGAGGAGGTAGAGCCGACCGGTGCAGTACCGATAGAGATGTCGTTGGAGAGGTATAGGTATGCAGCTCTGCCGAACAAATACTCGGAGGTTTGCTCTGACAAACGACTGCAGCCACGAGTGAGCCCGTTTCTCTTCCCGGGCTCGCAGATTCTGTCCAGAGACAAGGTCGGTTTCCAGCGGGTTCTGAATCAGTGGTACGGCGTGTCAAAACAGGGGTGGCGATTAGTTTATCGAGCATCTACTCATGGTTACTCAGCAGCGTCTTTTCATCGGCATTGTGATAATGTTTGTCCAACATATGTGATAGTGCtgGGAGTGCGTGGTGAAATATGCGGAGGATTCAGCGACGTTCCATGGGGTAAAACTAACTCGAAAGCGCAATACATTGCTTCCGAAAAGAGTTTTCTTTTCACGTTAACGAATAATCAAGATGTACCACCGACTAAGTTCGACATCGTGAAGAAATCATTTGCTATCTGCTATCATCCGGACATAGGGCCGATTTTTGGTGCCGGGGCTGATCTACTTATAGCAAGCAACTGCAATGTTAACAAGGAAAGCTACAGCAATCTTCCGCATAGTTACGATGGAGACCACGCATCTAATCAATTGCTTATGGGAGATTATCATTTCTCGGTAATCGACTATGAGGTTTTTACTCCAAGTCATCCAGCACCGAAATCTAATCATTAA
Protein Sequence
MGTRAVAVAAAAGAAGMSGEAGLAGVPRLLEDLARLSEDKDSADIVFLLGRDETPVYAHRIILQARCKNFTATKRLGTAGNPTPVRMPHAHPETFRQFIRYIYTGMIILQDSGIFEMLGLAQELGIEELWRSCEEHVSVTLSPGNACALLTAALEAQERVPGGKTACSSFIEKCFAFIGENAMDTVKTTAFCNLPKDALVKLISSDYLGLEEEDVWRAVLNWAKYQAGVTQPTQHWTEEERMRVCQHLSGVINHVRLLLIDSQVFAEEVEPTGAVPIEMSLERYRYAALPNKYSEVCSDKRLQPRVSPFLFPGSQILSRDKVGFQRVLNQWYGVSKQGWRLVYRASTHGYSAASFHRHCDNVCPTYVIVLGVRGEICGGFSDVPWGKTNSKAQYIASEKSFLFTLTNNQDVPPTKFDIVKKSFAICYHPDIGPIFGAGADLLIASNCNVNKESYSNLPHSYDGDHASNQLLMGDYHFSVIDYEVFTPSHPAPKSNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00898915; iTF_01271361; iTF_01269192; iTF_01267702; iTF_01268413; iTF_01269930; iTF_01270650; iTF_01266991; iTF_01520416; iTF_00265153; iTF_00306401; iTF_00729473; iTF_00222018; iTF_00227394; iTF_00361026; iTF_00216515; iTF_00219235; iTF_00867587; iTF_00221380; iTF_00230148; iTF_01419748; iTF_00233349; iTF_00215142; iTF_00109959; iTF_01355559; iTF_00086440; iTF_00862696; iTF_01454312; iTF_01069097; iTF_01228489; iTF_01245353; iTF_00088170; iTF_00217194; iTF_00217866; iTF_00231436; iTF_00762668; iTF_01122572; iTF_00084685; iTF_00230797; iTF_00676141; iTF_01394509; iTF_01421037; iTF_00219918; iTF_00280686; iTF_01066382; iTF_01071118; iTF_01392174; iTF_00225359; iTF_00360336; iTF_00218545; iTF_00763345; iTF_00866129; iTF_01539729; iTF_00264434; iTF_00014867; iTF_00015507; iTF_00625619; iTF_00963315; iTF_00966131; iTF_00184052; iTF_00222644; iTF_00226036; iTF_00215829; iTF_00223317; iTF_00964597; iTF_01120341; iTF_00963958; iTF_01067062; iTF_01070486; iTF_01391351; iTF_01477047; iTF_00024728; iTF_00730201; iTF_00773945; iTF_01065689; iTF_00087322; iTF_01523514; iTF_00228795; iTF_00303227; iTF_00226716; iTF_00869021; iTF_01068413; iTF_01417821; iTF_00085534; iTF_00088958; iTF_00385694; iTF_00866814; iTF_01477758; iTF_00229471; iTF_01069791; iTF_00224000; iTF_01004485; iTF_01077605; iTF_00734054; iTF_00633762; iTF_01392930; iTF_00798726; iTF_00756807; iTF_01056210; iTF_00880630; iTF_01100762; iTF_00200955; iTF_01498333; iTF_00391455; iTF_01538111; iTF_00224672; iTF_00770509; iTF_01199545; iTF_01198810; iTF_00983086; iTF_00220707; iTF_00982411; iTF_00140716; iTF_01420381; iTF_00228095; iTF_01130965; iTF_00059593; iTF_00132745; iTF_00452066; iTF_01006446; iTF_00132111; iTF_00131441; iTF_01000724; iTF_01001539; iTF_01002236; iTF_01057801; iTF_01057043; iTF_00343320; iTF_00728785; iTF_00351301; iTF_01015980; iTF_00438902; iTF_00438234; iTF_01512945; iTF_00398241; iTF_01207521; iTF_01514276; iTF_00629255; iTF_00414473; iTF_01102217; iTF_01234477; iTF_00905554; iTF_01235155; iTF_00051160; iTF_01514936; iTF_01233785; iTF_00397466; iTF_01103706; iTF_01090110; iTF_01232510; iTF_01513598; iTF_01233120; iTF_01254946; iTF_01474083; iTF_00183396; iTF_00961956; iTF_01123176; iTF_00292390; iTF_00291687; iTF_00298471; iTF_00294635; iTF_00296171; iTF_00297708; iTF_00295406; iTF_01473326; iTF_00293105; iTF_00293873; iTF_00254483; iTF_00296947; iTF_01475604; iTF_00252217; iTF_01474845; iTF_00861291; iTF_00865443; iTF_00863381; iTF_00864758; iTF_00962637; iTF_01169299; iTF_00879892; iTF_01395256; iTF_00255225; iTF_00252962; iTF_00253724; iTF_01406688; iTF_01087349; iTF_00769817; iTF_01424502; iTF_01493015; iTF_00864088; iTF_01200345; iTF_01048353; iTF_00175202; iTF_00265890; iTF_00439650; iTF_01509027; iTF_00829670; iTF_01413510; iTF_00828935; iTF_00718760; iTF_01299437; iTF_00263665; iTF_00938897; iTF_00174454; iTF_00262807; iTF_00266617; iTF_01414361; iTF_00719579; iTF_00175872; iTF_00393725; iTF_01255821; iTF_00118129; iTF_01418463; iTF_01067728; iTF_00141948;
90% Identity
iTF_01271361;
80% Identity
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