Ccot008539.1
Basic Information
- Insect
- Cyphomyrmex costatus
- Gene Symbol
- dmrt1_1
- Assembly
- GCA_001594065.1
- Location
- NW:1343772-1368442[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-19 2e-15 55.8 4.0 1 46 24 69 24 70 0.96
Sequence Information
- Coding Sequence
- ATGGGCAAGGTCAAAAAGAGTCCATCTCCGTTAAGAGAGGCAAAAATTCCTAAAACGATGACTGGGCGGAAAGTCCCAAAATGCGGGCGATGCTATATTCATGGAGTGGTAATTTTGCTCAGTGGACATAAAAAGTATTGCCAATTTCAAAACTGCGAATGTCCAcgttgttatatttttctggCGGAACAGAGATTAGCGGCAGACAAAATAGCTCAGAAACGAGCGTATGAGTTgagtaaattgaaaaaaattagtcATTTAGAGCGCGAGGTATCACCGACAACTTTATTTTATCCGACCATGAAAGAAAatGGTCTCTCGAATTTACTAATATACACATTGCATGAGATGTACAAATCTTTCACAGTGTGGCGTAATCCCTCAAAGATAGAGCGAATCTTACGCATTCTCATCAAGTATGCCTGTGAAATAGACTCGAGGATCAAATTTAATGGTTTTTTGGAATCTGCTAAAAAGTGGATTCTTCAAGcCTCAATAATTCGTCATTCGAAAATTATTCACCAGAATTTCGcgcaaaatgtaattttactatgtattatatatttaacatatccatttttatttaaatatcatttatttccaccttga
- Protein Sequence
- MGKVKKSPSPLREAKIPKTMTGRKVPKCGRCYIHGVVILLSGHKKYCQFQNCECPRCYIFLAEQRLAADKIAQKRAYELSKLKKISHLEREVSPTTLFYPTMKENGLSNLLIYTLHEMYKSFTVWRNPSKIERILRILIKYACEIDSRIKFNGFLESAKKWILQASIIRHSKIIHQNFAQNVILLCIIYLTYPFLFKYHLFPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -