Cimp010587.1
Basic Information
- Insect
- Cynegetis impunctata
- Gene Symbol
- SMARCC2
- Assembly
- GCA_030704885.1
- Location
- JARQZK010000728.1:786430-789535[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.8e-15 4.2e-11 45.0 0.1 3 44 592 633 590 635 0.95
Sequence Information
- Coding Sequence
- ATGATGCCGTTTGGTCCCAAGAAGGACGGAGGCCCAAATGCAAAGTATTTTGAATCTCCCGAAACGTTAACAGCATTGGAAACTGTCAAGCAATGGCTCcagaaaaatgtcaaaaaaTATATTCAGCCAGATCCTCCTACAAATAAGTCTATATCTTCTTTGATTATACAATTTCTTCAATTCCAAGAGGACTTCCTTGGTAAAAATGTTCAAAAGCCAGTAATGACAAGAATTCCGGTGAAATTCTTCATGGATTTTAAACCGGGTGGTGCCTTGTGTCAAATGTTACAAGTTGCTTATAAATTCAAAAGTGAACATAACTGGAAAAGATTTGAATTACCTATTGGAAAGAATCATGCAAAATTGGATcgaatatttgaaatgtttcaaaatatggaGAGAGCCTTAATAACAAGCAAAATATATTATGTCCCTTCTATCTACATAAAACCAGATTTGGACAAATCGTTGGTTTCCAAACTCAAGGAAATAGTTCGAAAAAGAAATGCGCAAGTAGCTGAAAATGAAGACTCTGCCTCTCATATCTGTTATGATCTTGTTGATCCTTTGGAAGAAGAATACGGTCGCCCATTATTCAAAAGGGATAAGATGGTTATGATGCATTGGTATTATTGCCCTAGTTCATTTGATACCTGGGTAAATATGGAGTCagctattgaaaatataaatatggaTAGCCCAAGCCCACATGATGGGCCGTGGAGAGTGTCCTACTCTTGGTTATTAGATACTGATCAATATAATGAATGGATGCCAGAGGAGGATTACGAAGTGGACGAGATGGGCAGGAAAAAGGTTCATCCAATGAGAATGTCTGTTGAAGATCTCATGAATCCTTCTTCCGAGGATAGAAATAAAAAGAAGCAGAAACGAAAACGATCCCCATCTCCGCCATCTAAAGTTGGCAAGAGAAAGAGTGGTAGAAGTCCTGCGATTGGTAAGAAACAAAAATCGGATGAAGCGGAACCTGAAGATCTGACAAAAGATATGGAGGAACCCACTCCAGAACCTAACATTGTTGAGGTTAATCCACCTCCACTACCTACTCTGCCAACAAAGAAAGACCATGAACTGCAGCCGCTGAAAGGTGGATCCATTACCGATATTGAAGAAGGCGAGGAAAAATGTGAAGATTCTCAAACTGGCAAGAATAGTGATACCACCACACAAGAAGACGGACAGGAGGATAATGTGACTGAACAAACGCATCATATAATAATTCCATCTTATTCTGCCTGGTTTGATTACAACTCTATTCATGAAGTTGAAAAACGGGCATTGCCAGAATTTTTCAATGGCAGAAATAAATCGAAAACCCCAGAGATTTACTTAGCTTATAGAAATTTCATGGTTGATACTTATAGACTAAACCCTACTGAGTACATAACAAGTACAGCTTGTAGAAGAAATTTAGCTGGAGATGTCTGTGCTATTATGAGGGTTCATGCTTTTCTTGAACAATGGGGTCTGATAAACTATCAGGTTGATACAGACTCTAGACCTACACCAATGGGCCCACCTCCAACTTCTCATTTTCACATACTATCTGACACTCCATCTGGGTTACAGCCAGTTAACCCACCAAAGACTCCCCAACCTAGTGCAGCAAAAACATTATTGGATTTAGACAGGACTGCAGAATTGAAGAAAACAGAAAACGGTGAACCAATATCAAGTTTTGGATTAAAATTGGACCAGTATGCCAAAAAACCAGCTGCTTTGAGGAATAAGAGTGCAGCTTCTTTGACAAGGGATTGGACTGAACAAGAGACCCTCCTTTTGTTAGAAGGGTTGGAAATGTATAAAGATGACTGGAATAAAGTTTGTGAACATGTTGGATCTAGAACACAAGATGAGTGTATACTACATTTTCTTCGACTTCCCATAGAGGATCCTTATTTAGAAGATCCAGAAGCAGGAGGGGCTTTGGGACCTCTGGCCTATCAACCTATTCCATTCAGCAAAGCTGGCAATCCTATAATGTCCACTGTAGCCTTTCTAGCATCTATTGTAGATCCTAGAGTTGCAGCAGCTGCAGCCAAATCTGCTATGAATGAATTTGCTAGTATTAAAGAAGAAGTTCCTGCTGCGGTTATGGATGCgcatttgaaaaatgttgaagCATCTTCTGCAGAAGGAAAGTATGATCCTGCTGCGAATTTGGCATTGACAAACATCGCTGGAACTATACCCGATAAAGAAGAGGAAGACAAAGTGAAAAAAGAAGATATCAAAGATGAGGACAAGACAGATGAAAAGAAGAATGGGGAGGAAGCTGACGACAAAATTGTTggtaaagaaaaatctgaacaGACAGAAGCAGATAAAGATGTTAAAATGGATACAACTGAAGTAAAACCTGAGAAGGTTGTAATTAAAGATAGTGAAATGCAAAGCGCAGCAGCGGCTGCTTTGGCAGCTGCAGCAGTCAAAGCCAAACATCTAGCAGCAGTTGaggaaagaaaaattaaatcgcTAGTAGCACTATTAGTCGAGactcaaatgaaaaaattagaaatcaaGCTTAGGCATTTTGAAGAACTGGAGACTACAATGGAACGTGAAAGAGAAGGATTGGAATATCAACGACAACAGCTCATAACAGAAAGACAACAGTTTCATCTAGAACAACTTAAAGCGGCAGAGTTCAGGGCTAGGCAGCAGGCTCACCAAAGACAACAAGCAGAACAAGGACAGTGGGCTACTAATCAGCCTCCATCTAGCCACGCCCCTCCAACGTCAGAACCAGGTGCTAGTAATACCCCTACTCCACCTTCCCCACAAGCCTCTGCTGTAGCATCTCCTGGTGCTCCACACCACCACATTTAA
- Protein Sequence
- MMPFGPKKDGGPNAKYFESPETLTALETVKQWLQKNVKKYIQPDPPTNKSISSLIIQFLQFQEDFLGKNVQKPVMTRIPVKFFMDFKPGGALCQMLQVAYKFKSEHNWKRFELPIGKNHAKLDRIFEMFQNMERALITSKIYYVPSIYIKPDLDKSLVSKLKEIVRKRNAQVAENEDSASHICYDLVDPLEEEYGRPLFKRDKMVMMHWYYCPSSFDTWVNMESAIENINMDSPSPHDGPWRVSYSWLLDTDQYNEWMPEEDYEVDEMGRKKVHPMRMSVEDLMNPSSEDRNKKKQKRKRSPSPPSKVGKRKSGRSPAIGKKQKSDEAEPEDLTKDMEEPTPEPNIVEVNPPPLPTLPTKKDHELQPLKGGSITDIEEGEEKCEDSQTGKNSDTTTQEDGQEDNVTEQTHHIIIPSYSAWFDYNSIHEVEKRALPEFFNGRNKSKTPEIYLAYRNFMVDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTDSRPTPMGPPPTSHFHILSDTPSGLQPVNPPKTPQPSAAKTLLDLDRTAELKKTENGEPISSFGLKLDQYAKKPAALRNKSAASLTRDWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDPEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVAAAAAKSAMNEFASIKEEVPAAVMDAHLKNVEASSAEGKYDPAANLALTNIAGTIPDKEEEDKVKKEDIKDEDKTDEKKNGEEADDKIVGKEKSEQTEADKDVKMDTTEVKPEKVVIKDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRQQAEQGQWATNQPPSSHAPPTSEPGASNTPTPPSPQASAVASPGAPHHHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00278075;
- 90% Identity
- iTF_00394448;
- 80% Identity
- -