Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_963920755.1
Location
OY987201.1:7059677-7062718[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.2e-15 6.9e-12 45.4 0.2 3 44 590 631 588 633 0.95

Sequence Information

Coding Sequence
ATGATGCCGTTCGGCCCTAAAAAGGACGGTGGTCCTAATAGCAAATTCTTTGAATCGCCTGAAACCTTGACTTTGCTAGAAGTTGTGCGACAGTGGTTGCAGAAAAACGCTAAAAAATATATACAGTCTGACCCGCCGACAAACAAGTATTTGGCCACCTTTGTGACGCAGCTACTACAATTCCAAGAAGACTTTTTGGGGAAAAATGTCCAGAAGCCCGTTATGACCAGGATACCAGTCAAATTCTTCATGGATTTTAAATCAGGTGGGGCTCTTTGCCAAATACTGTTGGCAGCCTATAAGTTTAAGAACGAACACAATTGGAGGCGCTTCGAGGTCCCTGCAGGCAAAAACAATGGAAAACTGGACAAGTTCCTTGAAATGTTTCAAAACATGGAAAAGGCTCTGATACAAAACAAGCTGTACACCATACCCATTATTTATATAAAGTCTGATTTGGATAAGCCTTTGGTAGCTAAGCTGAAGGACATAATTCGCAAGCGCAATGGTCAAGTTACTGAAAACGAAGACAGCGCGACGCATATCTGCTATGATTTGGTCGATCCGCTCGAGGAAGAGTACGGCAGACCGTTGTTTAAGCGAGACAAGATGGTCCTGATGCACTGGTACTACTTCCCAAATTCGTTCGACACGTGGGTCAACATGGAATCCGCCCTCGACGGCACGAATGTAGACGCGCCCAGCCCCCACGACGGCCCATGGCGTGTCTCATACTCGTGGCTTTTGGACACAGACCAATACAACGAGTGGATGACTGAGGAAGACTACGAAGTCGACGATTCGGGCCGCAAGAAGGTCCATCCGTTACGCATGTCGGTTGAAGACCTCATGAACCCATCTGGCGAGGAcaggaataagaaaaaacagaaGCGAAAGCGCTCGCCTTCACCACCGTCGAAGGTCGGCAAGAGGAAAAGCGGACGCAGCCCAGCCATTGGCAAGAAGCAAAAATCAGACGAAATGGACGCAGAGGACTTGACGAAAGACATGGAAGACCCTACCCCAGAGCCAAACGTGGTCGAAGTCCCAACAGTCGCCGCGCAACCCACAAAAAAGGACCACGAACTGCAACCCTTAAAAGGCGGAAGCCTAACCGAAATGGAGGAACAAGAAAAGTGCGAGGATTCTCAACCTGGCAAAACCAGCGACTCGACAACACAAGACGACGGGCTGGAAGACAACGTGACTGAGCAAACGCACCACATCATTGTCCCATCATACTCCGCTTGGTTTGACTACAACTCCATACACGAGGTCGAAAAACGCGCTCTACCTGAGTTTTTCAACGGGCGAAACAAGTCCAAGACCCCTGAGATATACCTAGCGTACCGGAACTTCATGGTCGACACGTACCGCTTAAACCCAACGGAATACATCACGTCCACAGCGTGTCGTCGCAATTTGGCTGGGGACGTTTGCGCAATAATGCGTGTGCACGCACTTTTGGAACAGTGGGGACTGATAAACTACCAAGTCGACGCAGATTCGCGTCCAACCCCCATGGGCCCGCCACCAACCTCGCATTTCCACATACTTTCCGACACGCCGTCGGGTCTACAACCCGTTAATCCGCCTAAAACGCCGCAACCAAGCGCGTCAAAAGTCCTACTTGACTTGGACAAGTCGCAGGACGTCAAAAAACTCGAAACGCCAGCAGAAGGCATCTCTACTTTCGGTTTAAAGCTTGACCAATATGCTAAGAAACCTGCAGCTCTGAGAAACAAAAACGCAGCGTCGTTGGCGCGCGACTGGACCGAACAGGAAACGCTTCTATTGTTGGAAGGATTAGAAATGCATAAAGACGATTGGAACAAAGTCTGTGAGCACGTAGGCTCGCGTACGCAAGACGAGTGCATTTTGCACTTCCTACGACTACCAATTGAAGACCCATATCTCGAGGACTCGTCCTGCGGACCTTTAGGCCCTTTGGCGTATCAGCCCATACCATTTTCACGATCCGGCAACCCAATCATGTCAACTGTCGCGTTTCTGGCATCCATTGTAGACCCAAGAGTGGCTTCAGCTGCAGCCAAATCGGCAATGAATGAATTTGCCAACATTAAAGACGAAGTGCCAACCGCTGTAATGGACGCGCACCTTAAAAACGTTGAGGCATCGTCCGCTGAAGGCAAATACGACCCTGCTGCTAATTTAGCCCTTACTGGCATAGCAGGAACTGCACCAGAAGGAAAGGAGGACGAGAAGATCAAGAAGGAAGATGTGAAAGAAGAGGACAAGGCAAGCGAGGCAAAGAAAAACGGCGAGGAGAGCAGTGACGAGAAATCAGAATCAGGCGATAAGGTCAAAAGCGAATTCGCGTCCGAGGACGGCGATAAAACGAACTGCGTCGACGCAAAACCCGAGAAAGTCGTAAAAGACAGCGAAATGCAAAGCGCAGCTGCGGCAGCTCTAGCCGCAGCCGCCGTAAAAGCCAAACATCTAGCAGCGGTCGAAGAGCGAAAGATAAAATCGCTAGTCGCGCTTCTAGTAGAAACCCAAATGAAGAAGCTCGAAATCAAGCTACGCCACTTTGAAGAGCTAGAAACGACTATGGAGCGCGAACGCGAGGGTCTTGAGTATCAGAGGCAGCAGCTCATCACAGAACGACAACAATTTCACTTAGAACAGCTCAAAGCAGCCGAGTTTAGAGCACGACAACAGGCGCATCAGCGTTTACAAGCGGAGCAAGGGCAATGGGCGGCCAATCAGCAATCGGCTGCGATTCCACACCCCCCTCCAGGCGGAGAGGCGGGGCCTAACACTACCCCCACTCCGCCTAGCCCGCAGGCAGCCGCAGTGACGTCGCCAGCGCCCCACCACAACATTTAA
Protein Sequence
MMPFGPKKDGGPNSKFFESPETLTLLEVVRQWLQKNAKKYIQSDPPTNKYLATFVTQLLQFQEDFLGKNVQKPVMTRIPVKFFMDFKSGGALCQILLAAYKFKNEHNWRRFEVPAGKNNGKLDKFLEMFQNMEKALIQNKLYTIPIIYIKSDLDKPLVAKLKDIIRKRNGQVTENEDSATHICYDLVDPLEEEYGRPLFKRDKMVLMHWYYFPNSFDTWVNMESALDGTNVDAPSPHDGPWRVSYSWLLDTDQYNEWMTEEDYEVDDSGRKKVHPLRMSVEDLMNPSGEDRNKKKQKRKRSPSPPSKVGKRKSGRSPAIGKKQKSDEMDAEDLTKDMEDPTPEPNVVEVPTVAAQPTKKDHELQPLKGGSLTEMEEQEKCEDSQPGKTSDSTTQDDGLEDNVTEQTHHIIVPSYSAWFDYNSIHEVEKRALPEFFNGRNKSKTPEIYLAYRNFMVDTYRLNPTEYITSTACRRNLAGDVCAIMRVHALLEQWGLINYQVDADSRPTPMGPPPTSHFHILSDTPSGLQPVNPPKTPQPSASKVLLDLDKSQDVKKLETPAEGISTFGLKLDQYAKKPAALRNKNAASLARDWTEQETLLLLEGLEMHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDSSCGPLGPLAYQPIPFSRSGNPIMSTVAFLASIVDPRVASAAAKSAMNEFANIKDEVPTAVMDAHLKNVEASSAEGKYDPAANLALTGIAGTAPEGKEDEKIKKEDVKEEDKASEAKKNGEESSDEKSESGDKVKSEFASEDGDKTNCVDAKPEKVVKDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQAEQGQWAANQQSAAIPHPPPGGEAGPNTTPTPPSPQAAAVTSPAPHHNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2