Basic Information

Insect: Cynaeus angustus
Gene Symbol: -
Assembly: GCA_030157275.1
Location: CM058065.1:2429620-2431665[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.31 25 5.9 0.8 3 23 162 183 160 183 0.91

2 12 0.0018 0.15 12.9 6.2 1 21 213 233 213 235 0.95

3 12 0.0018 0.14 12.9 5.4 1 23 241 263 241 263 0.98

4 12 7.4e-05 0.006 17.3 0.1 1 23 269 291 269 291 0.98

5 12 0.0066 0.54 11.1 5.3 3 23 350 370 349 370 0.99

6 12 0.00022 0.018 15.8 3.1 1 23 376 398 376 398 0.99

7 12 1.7e-06 0.00014 22.4 0.8 1 23 404 426 404 426 0.98

8 12 1.3e-05 0.0011 19.7 2.8 1 23 431 453 431 453 0.99

9 12 2.7e-06 0.00022 21.8 2.7 1 23 459 481 459 481 0.99

10 12 4e-07 3.2e-05 24.4 1.5 1 23 487 509 487 509 0.98

11 12 5.6e-05 0.0046 17.7 4.7 1 23 515 537 515 537 0.98

12 12 0.13 11 7.1 0.7 1 20 548 567 548 571 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.31	25	5.9	0.8	3	23	162	183	160	183	0.91
2	12	0.0018	0.15	12.9	6.2	1	21	213	233	213	235	0.95
3	12	0.0018	0.14	12.9	5.4	1	23	241	263	241	263	0.98
4	12	7.4e-05	0.006	17.3	0.1	1	23	269	291	269	291	0.98
5	12	0.0066	0.54	11.1	5.3	3	23	350	370	349	370	0.99
6	12	0.00022	0.018	15.8	3.1	1	23	376	398	376	398	0.99
7	12	1.7e-06	0.00014	22.4	0.8	1	23	404	426	404	426	0.98
8	12	1.3e-05	0.0011	19.7	2.8	1	23	431	453	431	453	0.99
9	12	2.7e-06	0.00022	21.8	2.7	1	23	459	481	459	481	0.99
10	12	4e-07	3.2e-05	24.4	1.5	1	23	487	509	487	509	0.98
11	12	5.6e-05	0.0046	17.7	4.7	1	23	515	537	515	537	0.98
12	12	0.13	11	7.1	0.7	1	20	548	567	548	571	0.87

Sequence Information

Coding Sequence: ATGGAGCCCCCCGATTCCGTCgaggtgcgtcttagcgacgTCTGTCGGTCCTGCTTGATAAAAACCGACGACATGACGAATTTTGTCCCCAAAAGCGAACAAACTTCTGAGATAATCGCTATGTTGTCGTCGGTCGGAAACATTGAGatcgAAATAAACGAAGTTTTACCGTCTTATCTCTGTAAGCCATGCGAAGAAAAATTAAGGTTATCTTACGACTTTCAGTTGTTAATACAAAGATCAAATGAAATCATTCGAGAGTGTATGAATGGGGGCGATATGGTTTCAGGGGAGGCTCTGGATTCTCCTGTGGAAGATAAATGCAACATTGAAGAACTTCCAGCTATTAAAGTTGAGGATACTCTTCTTATTGTTAACCCAGTTATAAGAAGAGCTTCAAAGACTGTGGAGCAGTTCTCTGCAGAAGAAGTTGAGGAAGCGATCCGGGAGCACCAAGAGAAGTTGTATTCAACCAACACTGAGTGTATAAAATGTGGGTTCCTCACAAGCCACGCCAAAGCGCTCTCCGCTCATATGTCGCGTCTCCACAAGGATATCAAAGATCGTTGGTGTGGTATTTGCAACACTGAAGTTGACAATCTCCCTGAACATACCGCGAGCCATGTAGAAACCCACTTCAAGTGCAAATTTTGCGGAAAAAAATTCACCTCCGGGGGGCACTTGTACGAACACTTACGCTGCCACTCAAGCGTGAAGCCTCACACGTGCTACATCTGTCACCGGGGCTTCATCGCGTACAGGCACCTAGAGAAACACCTGCGTGTACATATGAACAACCGTTTATACAAGTGCTCTTTGTGTCCCGCCAATTTTGCCGTGCGTAGCGCCCTCAAAGCGCATCTACAACAACACTACTCCTTGACCAAAAACGAAGAGTCTGAAAACTGCGAAGTCCCCGCCTTAAAACTAAGCAATCCCCAAAACTTCTGTAGGATATGCAAAAAACGCGTCCGAAGCCTAGAAAAACACAACGAGCGCTTCCACGACCCTACCGGCGCACCCATAAAGAAAACTGAGGGGATTTTGTGTACACAGTGCGGAAAGAAATTCAGTTGTCTGTCTCGGTTTCGTCTTCATATGCGGACCCACACCGGGGAAGCCCCCTACAAATGTCAGTACTGTGATAAACGAATGGCGAATCGTAACCACCTGATAATGCACGAGCGGACCCACACCGGGGAAAAACCGCACGTTTGTACCGTCTGTGGACGGGGTTTTTCTCAAACTAGTGTCCTGAACACTCACATGCGCATCCATACCGGGCGCCCTTACAAGTGTGATATTTGCGCAAAAAGGTTTTGTAGAGTGGCGCAATTGAGACTACATTTGCGCAAACACACGGGGGAAAAACCGTATCAGTGTGACCAGTGTGAACAAGCCTTTAAACAAGCTAGCCATTTAACAGAACATAGGAAGCGACACAGCAGCGAACGGCCCTACAAGTGTCCGCAGTGTGAGAAGAGTTTTAAACAGTTGTCGACTCTGAAGTCGCATCTCACGATACATACAGGGGAAAAACCGTTCAAGTGTAGCCAGTGCCCGTATGCTTGTCGACAGAGGTATAGCTTGACGCAACATATGAAACAACATAGCGCGGATGCTCCAGACCCTGAGAAGCCCcatttttgtagattatgTCAAAAGGGGTATAGTACCATGGCTATGTTGATGTCCCATAACGATCTAGCGCACAGTGCGTTTAAGATATAG
Protein Sequence: MEPPDSVEVRLSDVCRSCLIKTDDMTNFVPKSEQTSEIIAMLSSVGNIEIEINEVLPSYLCKPCEEKLRLSYDFQLLIQRSNEIIRECMNGGDMVSGEALDSPVEDKCNIEELPAIKVEDTLLIVNPVIRRASKTVEQFSAEEVEEAIREHQEKLYSTNTECIKCGFLTSHAKALSAHMSRLHKDIKDRWCGICNTEVDNLPEHTASHVETHFKCKFCGKKFTSGGHLYEHLRCHSSVKPHTCYICHRGFIAYRHLEKHLRVHMNNRLYKCSLCPANFAVRSALKAHLQQHYSLTKNEESENCEVPALKLSNPQNFCRICKKRVRSLEKHNERFHDPTGAPIKKTEGILCTQCGKKFSCLSRFRLHMRTHTGEAPYKCQYCDKRMANRNHLIMHERTHTGEKPHVCTVCGRGFSQTSVLNTHMRIHTGRPYKCDICAKRFCRVAQLRLHLRKHTGEKPYQCDQCEQAFKQASHLTEHRKRHSSERPYKCPQCEKSFKQLSTLKSHLTIHTGEKPFKCSQCPYACRQRYSLTQHMKQHSADAPDPEKPHFCRLCQKGYSTMAMLMSHNDLAHSAFKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00753234;
90% Identity: iTF_00753234;
80% Identity: -