Ccal041158.1
Basic Information
- Insect
- Cylloceria caligata
- Gene Symbol
- gatad1
- Assembly
- GCA_963942595.1
- Location
- OZ012709.1:38843687-38845139[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-08 0.00018 22.5 5.5 1 26 9 32 9 39 0.89
Sequence Information
- Coding Sequence
- ATGCCTTTCGGCGTAAAACCCGAGTGCGTTCGGTGTGGCACTCGCGAAACACCACTTTGGCACGCAACCGATGCCGGCAGTCTGTGCAATAATTGTCTCGAGGATGAAAGAAATACCGATGATaattctttcgttaagaatgaaGAGGACGAGAAAAATGGATTGGGTTTAAAACCGTCGCGAAAAAGCACGAGAATAACCCGTTACTGCAAGCCCAGACCTAATGTTACGCTGAAACCAGTGCCAAAGGGAAAGGGTCGTCGTCACATATTCAAAAAACAGCCTATCAAAGCTCCTTCTGCAGTAGCGACTCCAGTTACGAGCAACTTTGTTTTCTACAAAGGCTCGTACTTTCAAATTGGCGATATAGTATCCATGGAAGACACTGATGGAGGAATTTATTATGCTCAAATTAGAGGACTGCTTACAGATCAGTACTGCGAAAAAAGTGCTGCCGTCACCTGGCTTTTGCCTACGTCAGCTAGTCCTCCCCCAGAGGAAGGCTTTGATCCAGAAACTTACATAATAGGACCGGAAGAGGACCTGCCACGTAAACTGGAATGCATGGAATTTGTAATGCACGCCCCTTCGGATTATTACAAACTGAAAAATAGTCCATATCCACCTCCACTGACGGAGACTGGTACCGGTTACATATGGACGTCGTTCAGGAACGAAGTTGCGACTAGTAAAAAGTAA
- Protein Sequence
- MPFGVKPECVRCGTRETPLWHATDAGSLCNNCLEDERNTDDNSFVKNEEDEKNGLGLKPSRKSTRITRYCKPRPNVTLKPVPKGKGRRHIFKKQPIKAPSAVATPVTSNFVFYKGSYFQIGDIVSMEDTDGGIYYAQIRGLLTDQYCEKSAAVTWLLPTSASPPPEEGFDPETYIIGPEEDLPRKLECMEFVMHAPSDYYKLKNSPYPPPLTETGTGYIWTSFRNEVATSKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00460167;
- 90% Identity
- iTF_01129738; iTF_00798951; iTF_00653268; iTF_00460167; iTF_00397736; iTF_00398511; iTF_00841522; iTF_01207789; iTF_00059854; iTF_01365073; iTF_00721685; iTF_00905786; iTF_00343547; iTF_01497875; iTF_01058042; iTF_00629491;
- 80% Identity
- -