Basic Information

Gene Symbol
gatad1
Assembly
GCA_933228735.2
Location
OW121697.1:461757-463321[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-09 5e-06 26.0 4.1 1 26 9 32 9 38 0.90

Sequence Information

Coding Sequence
atgccTCTCGGCGTGAAGCACGAGTGCGTGCGTTGCGGGACCCGCGAGACGCCATTGTGGCACGCGACCGACGCCGGAAGTCTTTGCAACGCctgcctcgaggacgagaGGAACGTCGACGGCGGTGCGACGGTGaagaacgaggaggacgagaagaATGGCCTCGGCTCGAAACCTTCGCGCAAGAGTACGCGAACTACGCGCTACTGCAAACCGAGGCCGAACGCCTCGCTCAAGGCCGCGCCCAAGGGCAAGGGTCGTCGACACATTTTCAAgaaacagcctaTAAAAGCGCCATCGGCGGCGGCGACTCCGGTGACCAGCAACTTTGTGTTCTACAAAGGGTCGTACTTCCAAGTGGGAGACATTGTTTCGATGGAGGACACCGAGGGGGGAATATATTACGCTCAGATCAGGGGCCTCCTGACCGATCAGTATTGCGAAAAAAGCGCCGCCGTTACCTGGCTCTTGCCCACTACGGCCAGCCCCGCGCCCGAAGAGGGTTTCAGCCCGGAAACTTACATAATCGGACCGGAAGAGGATTTGCCGCGAAAGCTCGAGTGCATGGAATTCGTGATGCACGCCCCGTCCGATTATTACAAGCTGAAGAACAGTCCTTATCCGCCGCCGCTCACGGAAACTGGCGCGGGTTACATATGGACGTCGCTCAGAAACGAAGTCGCCGCTGTTAAGAAATAA
Protein Sequence
MPLGVKHECVRCGTRETPLWHATDAGSLCNACLEDERNVDGGATVKNEEDEKNGLGSKPSRKSTRTTRYCKPRPNASLKAAPKGKGRRHIFKKQPIKAPSAAATPVTSNFVFYKGSYFQVGDIVSMEDTEGGIYYAQIRGLLTDQYCEKSAAVTWLLPTTASPAPEEGFSPETYIIGPEEDLPRKLECMEFVMHAPSDYYKLKNSPYPPPLTETGAGYIWTSLRNEVAAVKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00460167;
90% Identity
iTF_00414732;
80% Identity
-