Ccal014715.1
Basic Information
- Insect
- Cylloceria caligata
- Gene Symbol
- Hr39
- Assembly
- GCA_963942595.1
- Location
- OZ012704.1:71272125-71278860[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.12 3e+03 -1.2 5.6 76 163 205 322 152 343 0.61 2 4 2 5.1e+04 -8.6 14.8 74 148 361 439 334 471 0.57 3 4 3.7e-08 0.00096 20.2 0.0 1 21 538 558 538 562 0.92 4 4 6.6e-73 1.7e-68 233.4 0.0 89 408 596 915 568 915 0.81
Sequence Information
- Coding Sequence
- ATGTCGGAGCAAAACGGGCCCACGGAGGGCCCGGGATGGTGGCCTCCGGCGCAATCGTGGAAGTCATCCGCCACCTCCTCATCGTCGACGATTCCATCCTCTCGCACACTCGAAGCTGGCAAAAATATTTCCGTCACGACGATCAACGTACCACCGGCCCAGGAGATGCATGACGGTAAAAGCGTCTGCAAGTATCTGGGAGGACAGAACGGCGTGACTGTATCGGTCGTCTCGAGTTGCGGTAGCGGTCCAGGTAGCGGTATGGGTACAGGACCTGGTAGCGGAGGAGGCGGATGTGGCGCGTCTTCCTCGTGTCCGGAGTCGAGTTCGTACGACGATCTCGAGGACAGCGATGGGGAAGTTAGCAAGATCGACTTTCGCGGTGTTAATCTACGCACGAAGAAGAAGCGAGATGCCTCTGGTGGTACGGAAAACGATTGCGGTGCCGTGGGCGCCGACAATCTCGAGCAACAGCAGCCCGAGAGACCGATGTCATGGGAGGGCGAGCTATCCGATCAGGAAATGTCTTCCAATACCATCACCAACCAGgatcaCGAGGAGACCTCGATGGAAGGTGTTCAGGTGTGCGGTGCGAGTCCGGGCCCTCAGGAGCAAAAATTTCCGATAAAACCAGAGCCGGATTTTCGCTTGAGCCCGGGTCTCGCGCACGGTTCTCACATAGATGCGAACTTGCCATTGTCTCACGCGCAGCAGCTTCAACACCACCAACAGCTGCAACGAGGAATCGACGGTCTCGAGCAAACGCAACAGAGCGATCTGCCCTTACTGGTCGGCAAACTTCTCGGCGGTTACAACAGTTCCACGCCGAATCACAGTCCCATTCTGAATCCACGGCATCATTTGACGAAGCATAGTCACACGAGGTCTCAGGTTCCATCCCCTGATTCGGCGATTCACTCGGCCTACAGCGTATTCAGCTCGCCAACGCAGAGTCCTCACGCCGCTCGACACTCGGCCCTCGGAGCCGGCAGTCCTGTGCCTTCCTCGTCTCTCTCCCTGTCTCGTCACAGTTTTAATAATTCCACGTCCTCCCTCTCACTCTCGTTGTCGCACTCGTTGTCACGCAACAATTCAGACGCTTCGAGCAGTTGCTACAGCTACGGTTCTCTGAGTCCGCCCACACATTCACCCGTCCAGCAGCCGAGACACTCGCACGCGCAGCATCATCACCAAcatcaacagcagcagcagcagcagcagcagcagaaggtTGCGCAGGGTAGTCCGTTGCATCTACCGTCAGCCACTGCAACGAATGCTCATCACTACTCGACTCCGGGTTCAGAGCTCTCGTCCGAAGGCCATCCGGAGGATCAGGAGGACTGCAAGATCCCATCGGCGCCCTCGGGTATCTCCACGAGGCAGCAACTCATCAACAGCCCCTGTCCTATCTGCGGCGACAAAATCAGTGGTTTTCATTACGGAATATTCTCCTGCGAGTCGTGCAAAGGTTTTTTTAAGCGTACCGTACAGAATCGCAAGAATTACGTCTGCCTGAGAGGCGCCGGTTGTCCCGTCACTGTCGCTACGAGGAAAAAGTGTCCGGCATGTCGATTCGACAAGTGTCTCAATATGGGCATGAAGCTCGAGGCGATCAGGGAGGACAGAACCCGCGGAGGCAGGAGTACGTATCAGTGCACGTATACTTTGCCGGCGAACCTCATCGGCAGCCCCGCAGGGGGCATGTCCGGTGACAAAATGACCGGAGGTACCTGCAGTCCCGCGCCTCCTGGCTCGGAGCATCATCATTCCGTGCGACATCACTGGAATCACTCGCACAAGATGCAAGCCGTCCCTCAGTTGTTGCAGGATATTATGGATGTCGAGCATCTCTGGCATTATAACGACAACGACCGAACGACAGGCGGAAGTCAGACCGCGGGCTCGAGCCTCGGTGGTAACGGAGCGCAGATGCCCAACGAAATGCCCAGCGGACTCGGAGATCTATCCAGTGCTGGCAGTGGAAACACCGCGAGTAGCAACGGCAACGTTGACAATAGGCCCGAACCCACGAGATCAAGCTCCGCCGGACCGGCTGGAAATCACGAGCATCAGCAGCAACATTCGCCCACGAACAATCCTTCACCCGGGACCAATTCCACTTGCAATCCCAATGGAAATTCCACGCAAAATCCAGACTTTTTGTCGAATCTTTGCAATATCGCCGATCACAGATTGTACAAGATTGTCAAGTGGTGCAAGAGCTTACCGCTTTTTAAGAATATTTCGATCGATGACCAGATATGCTTATTGATCAATTCCTGGTGCGAGTTGCTGCTGTTCTCGTGTTGCTTTCGCAGCATGAGCACACCTGGAGAAATTAGGGTCTCGCTCGGCAAGTCCATCACCCTGGAACAAGCTAGACAACTGGGATTGGCCACGTGTATCGAGAGGATGCTCGCTTTCACGAACAATCTCAGGCGGTTGAGGGTCGATCAGTACGAATATGTCGCGATGAAGGTAATCGTTCTACTGACTTCGGATACGAGCGAGTTGAAGGAGCCAGAGAAAGTGCGAGCATCGCAGGAGAAGGCACTGCAGGCGCTTCAGCAGTACACGATCGCGAGGTATCCGGAAATGCCAGCAAAATTCGGTGAGCTTCTTCTGCGAATACCGGATTTGCAGAGAACATGCCAAGCCGGTAAAGAGTTGCTAAGTGCGAAGCGCGCCGAGGGCGAAGGCAGCTCTTTCAATCTCTTGATGGAATTGCTGCGGGGAGATCACTGA
- Protein Sequence
- MSEQNGPTEGPGWWPPAQSWKSSATSSSSTIPSSRTLEAGKNISVTTINVPPAQEMHDGKSVCKYLGGQNGVTVSVVSSCGSGPGSGMGTGPGSGGGGCGASSSCPESSSYDDLEDSDGEVSKIDFRGVNLRTKKKRDASGGTENDCGAVGADNLEQQQPERPMSWEGELSDQEMSSNTITNQDHEETSMEGVQVCGASPGPQEQKFPIKPEPDFRLSPGLAHGSHIDANLPLSHAQQLQHHQQLQRGIDGLEQTQQSDLPLLVGKLLGGYNSSTPNHSPILNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHAQHHHQHQQQQQQQQQQKVAQGSPLHLPSATATNAHHYSTPGSELSSEGHPEDQEDCKIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGSPAGGMSGDKMTGGTCSPAPPGSEHHHSVRHHWNHSHKMQAVPQLLQDIMDVEHLWHYNDNDRTTGGSQTAGSSLGGNGAQMPNEMPSGLGDLSSAGSGNTASSNGNVDNRPEPTRSSSAGPAGNHEHQQQHSPTNNPSPGTNSTCNPNGNSTQNPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00059522;
- 90% Identity
- iTF_00057987;
- 80% Identity
- iTF_00414388;