Ccal009951.1
Basic Information
- Insect
- Cylloceria caligata
- Gene Symbol
- dmd-4
- Assembly
- GCA_963942595.1
- Location
- OZ012704.1:14466986-14472234[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-25 1.1e-21 77.8 10.8 1 47 21 67 21 67 0.99 2 2 0.8 8.2e+03 -1.7 0.8 3 8 376 381 375 383 0.76
Sequence Information
- Coding Sequence
- ATGCTACGAGGAAAATCTAAGAAATCGGAGCAGGACGATCACGAAACCGAGTGCAAGCAGAGGAGGCCCAAGTGCGCTCGTTGCAGGAATCACGGATTCATCTCCTGGCTCAGAGGACACAAACGAGAATGTCGGTACAGGGAATGTCTTTGTCCCAAATGTTCTTTAATTGCCGAACGGCAAAGGGTCATGGCAGCTCAGGTTGCCTTGAAGAGACAGCAAGCTGCGGAGGATGCGATTGCTCTGAGCATGGCTAAAGTCGCTACAGGTCAGAAACTGGATCGTCTTCCTCCAGGGAAAATTTTTGGGATGGCTGTTACCGAACCAAACTCTTTAATAATGCGGGCTCGACTATCCCCTACAGAAACTTCAGTTGCGATAGAACACACCGACGAAACATCTTCGACGAGCCTCGAGAAAggaaaaacgaaaaaagaagaaacaatAACTGCCTCTGAAGTTTTATCGAATCGATCGCCAGCCCAGAGCCCTTCGCCCAAGGAAGATCATAATAACAAAAGCAGTGCGTTATTCGTCGTAAACAAGCGCGCCGAAACGTCAGAGGATGAAGTTGGAAAGGAAATAAATTCAGTATCTCAGACCTCTGTGGAGACTCTGGCCCGTCTCTTTCCAAGCACGAAGATATCGGTTCTCCAATTGGTACTTCAGCGTTGCGGCCAGGATCTCCTTAAGGCTATTGAGTACTTTGCGAGCGACAATGGCATCGGGAATTCGAGTTCCTGCTCTTCGGCGTTTCGTCCACCAGCAATGTCGTTGCCGGAAGCGAGACAAAGCGCAGAATATCCAAGCGTTTTTCCTCTTCctccgatttattcgaatcttTCGAGAAACCTCTACGGAGATGGCTATTGCCTTCTAAATATCGTACCCGATCAACTCTCCCGTGGTCTCGTTCCCGGCGAATTATCCACTGGTTGCGGAAGCCTCGCTGCTTTTCCAAACTCCAAAGCGACGAGCGCTCACGAACAGGACAACAGCGTCGCTTTTAGTGTTCAGTACAACAATTATTTTAATTCAACCGTGCAGCAACAATTGCGCGAACACTCGAACCGTAATGGTTTGCTACATTTACCTCCCGTTATTCCCGGTATTCCTTGTGTACAACCCAATTGCACGCAATGCTACAAATTCATTTGA
- Protein Sequence
- MLRGKSKKSEQDDHETECKQRRPKCARCRNHGFISWLRGHKRECRYRECLCPKCSLIAERQRVMAAQVALKRQQAAEDAIALSMAKVATGQKLDRLPPGKIFGMAVTEPNSLIMRARLSPTETSVAIEHTDETSSTSLEKGKTKKEETITASEVLSNRSPAQSPSPKEDHNNKSSALFVVNKRAETSEDEVGKEINSVSQTSVETLARLFPSTKISVLQLVLQRCGQDLLKAIEYFASDNGIGNSSSCSSAFRPPAMSLPEARQSAEYPSVFPLPPIYSNLSRNLYGDGYCLLNIVPDQLSRGLVPGELSTGCGSLAAFPNSKATSAHEQDNSVAFSVQYNNYFNSTVQQQLREHSNRNGLLHLPPVIPGIPCVQPNCTQCYKFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00652743;
- 90% Identity
- -
- 80% Identity
- -