Ccal001728.1
Basic Information
- Insect
- Cylloceria caligata
- Gene Symbol
- Rel
- Assembly
- GCA_963942595.1
- Location
- OZ012703.1:2957795-2962303[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-42 6.1e-38 131.9 1.0 1 168 47 238 47 239 0.91 2 2 2.7 3.5e+04 -4.0 0.0 32 48 807 823 805 827 0.83
Sequence Information
- Coding Sequence
- ATGAGCACCACGTCGTCACCGATGTCCATAGCTCTGTCTCCGCAAGGGGACGATTCTACATCGAACATGTTCGACATGAGCGACGAAAGCTTTATGAATCTGACGGGAACAACCGCAATGGAACTGCCATTGCCGCAGATAGAAATACTGGATCAACCTGTGGATAAATTTAGATTCAGGTACAAATCTGAGATGATGGGTACTCATGGATGTTTATCGAGCGCTAGTACAACTTCCAGACGAAAGAGACAGGCGCCGACAGTAAAATTGGTTAATTTTGTGGGTCAAAAAGCCAAAATACGATGCACTCTGGTGACTTCCGATGTGAACAGAAGAATTCCTCATGCACATCACCTGGTGAAACGAGAAGGCAGTGACGAAAACGATGCGCCATACGAAATAGAAGTTTCCGCAGATAATGATTTCACAGCCCAATTTCATGGTATGGGTATTATTCATACCGCAAAGAAACACATCAAGGACGAGCTCGTGAAGAAAATGCGTATGGAAATGATCGAGAAGCGTAGAAGCAAGAACGCGAATGCGCGAAATTTGACGGTGTGCGAAGAAACTcagATCAAAATGGATGCGGATAACGCTCAAAAGTGGATGAATCTTAATAGCGTGTCTCTATGCTTCGAAGCTTTTATCGAAGGTTCGAATCGGGTGTTCAAGTCCCTTACAGATCGAGTGTATTCAACCCCTATTAATAATCTCAaaAGTGCCTTGACCGGAGAATTGAAAATTTGCCGAATCGACAAGTACTCGAGTTCTTGCGACGGTGGAGAGGAAGTTTTTATGCTCGTCGAGAAAGTCGGCAAAAaaaatataaaagttaagttTTTCGAAACTGATGAGAATGATCACGAGATCTGGCAGGATTACGGACGTTTCTCGGAACTGGATGTTCACCATCAATATGCTATCGTTTTTAAAACTCCTGCGTACAAAGATCGTTGTATCACGGAGCCTAGAGAAGTGTACATAAAGCTGGAACGGCCAACCGACGGTGATAGCTCTGATCCCGTAAAATTTACGTACAAGCCAACTGACGGTTTAATGCATAAAAAACGTCCTCGGATTTCGTATTCGGGAAGTtcagattttcaaaaaatcgtacAAGTCGATAATAATGTAAACGTGAAGGCTTTTCGAATGCCATCGAACGATTCTTCCAGCTCCTCGAAAGAACTTGCCAAATTCATAAACGATTCGAGCAAGATTGGCTCCGACGAATTTGCGAAGTTTCTTCATAAGTTAGACATCGATGAATATGTCAATATGCTGGGCTTGGCGAATGACGACGATCAAATGTTAACTACGGATGGAGCGTCCTCAAACGACACCGAAATAAACTTTGCGGGAAATTTAATACGCGATACACTGAAGAAAATACGAGAAGAACCTGCGAGAGCCAAAGAGCTTATTACGAAAATGATTGACGAACGAACGACGTACGGCGATACACCACTGCACTCGGCTCTTCGTCATGGGCAGCCTGACATCGTCAAATATATTCTCATGATTTCGGCCAGTGATCCAGATTTCAAGTTCTTGGTGCATCTTAAAAACAGCTCGGGAAAGACACCGCTGCATTATGCTGTTTCACTTAACCAACCCGAAGTGGTGAATGCGTTACTCGCGCTGGGGGCAGATCCGAACGAATGCGACGATCGCGACTTCTATCCACTCCACGCTGCAGTCAAGAGACCAGAAGCAGGAGCGTGTGTTGATGTCCTATTAACCAAACAGCTTAAAATTGATGCGCGAGACGAGGCAGGGTGGACGCCGTTGCAACTGGCGGTCGAAGCTGGCTCGTTCCACGCTGTTCGGTCTCTTATCAATGCTGGAGCAGACGTAAATCAATCCGAAGTCTCTTATGGACGCACGGCTCTTCACGTTGCCGTCGAGAACAGCCATGTTGATATTGTCAAGTATCTCGTGGAGAAGACAAAAATCAATATCAATCAGACGAACCTGGGTGGCAATACAGCGCTGCACAGCGCTGTTGCCAATCCGTCTAAGCATTCTAAAGAAATGTGTAAGATTCTACTGGATCATGGTGCGAATCCACACATACCAAATAATACCAGAGATTCGGCAGATGGAGATGAGAAAGATTTAGTCCTTAGCGTCAAGGATGAACCCGAGGACGATGATATGGACCAAGACATAGGTCAGACGTCTTTTGATCTTGCCTCGAATAAACCTGAGATCCTGCATTTGTTCGCTCAAATTTCCAAGAACCAGAGTCTCACGGATAACACAATCACGATAAAGGAAGAAGTTACCGAGGAAGACACCCTGACGACTTGCTTGGATACGACTACTTGCACCGCGCTTGCCGCGATCATCGATAAAAATCGCTCTTGGCAAAAACTTGCGAAGCATCTACAATGCGACTATCTTTTGAGTACACTCGACACTTCGAAATCTAGTCCGTCTCTTACCATTCTCAATTACGCGGACgtGCAAGGCACTTTGTCGATGAATAATCTAATGGAATCACTGACTAAGATCGGCGAGACAGACGGCGCGGCGTTCATAAAAAAAGTTATGAATAAACGCAGTTGA
- Protein Sequence
- MSTTSSPMSIALSPQGDDSTSNMFDMSDESFMNLTGTTAMELPLPQIEILDQPVDKFRFRYKSEMMGTHGCLSSASTTSRRKRQAPTVKLVNFVGQKAKIRCTLVTSDVNRRIPHAHHLVKREGSDENDAPYEIEVSADNDFTAQFHGMGIIHTAKKHIKDELVKKMRMEMIEKRRSKNANARNLTVCEETQIKMDADNAQKWMNLNSVSLCFEAFIEGSNRVFKSLTDRVYSTPINNLKSALTGELKICRIDKYSSSCDGGEEVFMLVEKVGKKNIKVKFFETDENDHEIWQDYGRFSELDVHHQYAIVFKTPAYKDRCITEPREVYIKLERPTDGDSSDPVKFTYKPTDGLMHKKRPRISYSGSSDFQKIVQVDNNVNVKAFRMPSNDSSSSSKELAKFINDSSKIGSDEFAKFLHKLDIDEYVNMLGLANDDDQMLTTDGASSNDTEINFAGNLIRDTLKKIREEPARAKELITKMIDERTTYGDTPLHSALRHGQPDIVKYILMISASDPDFKFLVHLKNSSGKTPLHYAVSLNQPEVVNALLALGADPNECDDRDFYPLHAAVKRPEAGACVDVLLTKQLKIDARDEAGWTPLQLAVEAGSFHAVRSLINAGADVNQSEVSYGRTALHVAVENSHVDIVKYLVEKTKININQTNLGGNTALHSAVANPSKHSKEMCKILLDHGANPHIPNNTRDSADGDEKDLVLSVKDEPEDDDMDQDIGQTSFDLASNKPEILHLFAQISKNQSLTDNTITIKEEVTEEDTLTTCLDTTTCTALAAIIDKNRSWQKLAKHLQCDYLLSTLDTSKSSPSLTILNYADVQGTLSMNNLMESLTKIGETDGAAFIKKVMNKRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01497156;
- 90% Identity
- -
- 80% Identity
- -