Cfor003042.1
Basic Information
- Insect
- Cylas formicarius
- Gene Symbol
- dl
- Assembly
- GCA_029955315.1
- Location
- JARGXY010000002.1:11200120-11206245[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-72 4.4e-68 228.9 0.0 1 169 20 190 20 190 0.99 2 2 1.5 1.7e+04 -4.1 0.4 101 138 333 371 331 373 0.65
Sequence Information
- Coding Sequence
- ATGCCTGCGCCAGCTGTCCCCCAACCAAGTATTAGCATTAAGAAAAGCCAAATTCACGTAAAGatCATAGAGCAACCTGCCTCGAAGGCCTTACGGTTTCGATATGTCTGTGAGGGGAGGTCAGCTGGCTCAATTCCCGGAGCTAGTAGCACTCCTGAAAACAAAACCTACCCCGAAATTCAGGTGGTTGGTTACCAAGGACGAGCTGTGGTGGTAGTGTCTTGTGTTACCAAAGATGCCCCATACAAGGCTCACCCTCATAGCTTAGTGGGACGCGAGGGATGCAAAAGAGGCGTTTGCACTCTTGAAATCCCACCCGATACAATGAGGGTACAGTTTTCGAATTTAGGTATACAGTGTGTGAAGAAAAGAGACATCGAAGAGGCTCTTAGGCAGAGGGAGGAAATTAGGGTGGATCCTTTTCGACAGGGCTACAGCCATCGAAACCAACCTACCTCGATAGATCTCAATGCTGTTCGGTTATGTTTCCAAGTATTCCTAGAGGGCGACACACCCAATAAGTTTAATGTCCCGCTTGCCCCCATAGTCAGCGAAGTCATTTACGACAAAAAGGCCATGTCTGATCTCACAATAGTAAAGCTGTCTGACTGCGTTAGCTTCGTAGATGGAGGACGCAAGGACATGATTCTTCTTTGCGAAAAGGTGGCGAAAGAAGATATTCAAATCCGTTTTTATGAAGAGAAAGAAGGGAAGGTCGTGTGGGAAGGACTTGCCGATTTTCAGCCATCCCAGGTTCACAAGCAGACAGCCATTTGGTTCAGGACACCCCGGTATCGTACGTTGGACGTGACGGAACCCGTTAGAGTGCTTATTCAGCTGAGGAGACCGTCGGATGGCGCCACCAGCGAACCGTTACCGTTCGAGTTGTTGCCTTTGGACGCAGGTAGGTCCCCGTACTGGTCATTCAAACGCAACATGGCCAAAAAGGCGAACTATCAACTCTTCAACAATATTCTGAACAACGACGCGAAACTGGTAGCCAAAAGGCAGCTGAGTAATCCAAGCGAAAGTAAATTAGAGATCACGGACGCCAACAGCAACGTGGTTGACACGTCCGATGAGATAAAGAAGAGCAAGAAAGACGAAAATACGGTATCCGCGGATAGAGACGACATATTGAACAACAACGATTCCGAAGAAAAATCGTTCAACGAACTGATCAATCAGGTCGCGGAGTTGGACGAGATTTATTCCGACGCGCACGCGAAATTGTCGCAGGAAGCGACAAATATGGAAGTCGTGGAACGTCGAGAGTCGTTTGACGACGCGAAAACCTACTCGAGCCTGCAACTGGCTTTTAAAAATCCGCTGATCAATATGAATCACAAAAGTCTTCCTCCAAAACCGTCCTCAATCGCTGACGTACATCAAGTCGCGATGGACAATGCTTTGCCCCCTTTACCTCCAAAACGCACCAAAAAAATCGAGACTTATATAGGGGGCTCAATGTCGAGTATACCCGGAAAGCAAGGGGCGGGGTCTCTAGTCCGTAGTAATTCGGGCAGCGTCGGTAGGTCGCAATCGTTTAATTTGCAACGCCCGAAATCGCAGGGCGATCTTCTGCCGCCGGGAAAAGGGCTTCCTCCGGTGCCGCACGCTTGCTCTACGTTGCCAAACCCAAAAAAGCGAGGTTTTTTCTCGAAACTGTTTGGACGAAAAAGTAAAACGCCCGGTGCGTCTCGCGAAGCTAGCGTCACGCCATCTTTTCATAGTACCAAATCGCTAGCGGTCGACAGTAGCTTAGCGAAAAGTTCGGGCAACTTATCCACCCACTCTAGCAATAGCGTGCGAATACCGTTAAAAGACAGTCCTCCTCGTGGTGATCTTATGGGACCTATCGCGTTGAATTTGGATGAGGACATAGATATGCACTTGGATCTAACAGAGGCTGAAAACTACGCTTTATATACTGCGATGGCCCCGCACGCTACTCAAAGCGAATTCGACGAGTTTAGTTGCTATTACGCCCCCGTGGAAGGTGGCAAGTTGTTGACTAGTGCTGAAGTTGCCTCGAGGATCAGTTAA
- Protein Sequence
- MPAPAVPQPSISIKKSQIHVKIIEQPASKALRFRYVCEGRSAGSIPGASSTPENKTYPEIQVVGYQGRAVVVVSCVTKDAPYKAHPHSLVGREGCKRGVCTLEIPPDTMRVQFSNLGIQCVKKRDIEEALRQREEIRVDPFRQGYSHRNQPTSIDLNAVRLCFQVFLEGDTPNKFNVPLAPIVSEVIYDKKAMSDLTIVKLSDCVSFVDGGRKDMILLCEKVAKEDIQIRFYEEKEGKVVWEGLADFQPSQVHKQTAIWFRTPRYRTLDVTEPVRVLIQLRRPSDGATSEPLPFELLPLDAGRSPYWSFKRNMAKKANYQLFNNILNNDAKLVAKRQLSNPSESKLEITDANSNVVDTSDEIKKSKKDENTVSADRDDILNNNDSEEKSFNELINQVAELDEIYSDAHAKLSQEATNMEVVERRESFDDAKTYSSLQLAFKNPLINMNHKSLPPKPSSIADVHQVAMDNALPPLPPKRTKKIETYIGGSMSSIPGKQGAGSLVRSNSGSVGRSQSFNLQRPKSQGDLLPPGKGLPPVPHACSTLPNPKKRGFFSKLFGRKSKTPGASREASVTPSFHSTKSLAVDSSLAKSSGNLSTHSSNSVRIPLKDSPPRGDLMGPIALNLDEDIDMHLDLTEAENYALYTAMAPHATQSEFDEFSCYYAPVEGGKLLTSAEVASRIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -