Cstr027087.1
Basic Information
- Insect
- Cydia strobilella
- Gene Symbol
- LZTR1
- Assembly
- GCA_947568885.1
- Location
- OX387694.1:9961543-9979387[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 3.8e-15 1.1e-12 48.7 0.0 4 109 364 500 361 501 0.88 2 11 5.5 1.5e+03 -0.1 0.0 80 108 503 531 499 533 0.87 3 11 3.1e-08 8.6e-06 26.5 0.0 10 50 596 633 593 645 0.82 4 11 3e-05 0.0084 16.9 0.1 24 50 689 713 683 725 0.77 5 11 3e-05 0.0084 16.9 0.1 24 50 769 793 763 805 0.77 6 11 3e-05 0.0084 16.9 0.1 24 50 849 873 843 885 0.77 7 11 3e-05 0.0084 16.9 0.1 24 50 929 953 923 965 0.77 8 11 3e-05 0.0084 16.9 0.1 24 50 1009 1033 1003 1045 0.77 9 11 3e-05 0.0084 16.9 0.1 24 50 1089 1113 1083 1125 0.77 10 11 3e-05 0.0084 16.9 0.1 24 50 1169 1193 1163 1205 0.77 11 11 1.8e-05 0.0051 17.6 0.0 24 54 1249 1281 1243 1295 0.72
Sequence Information
- Coding Sequence
- ATGCAGAGCAGGGAGAAGATGATAACGGAGCAGCTGCGGAATCCGAATGAGCTGGACATCAGCCTTCGGATGGAATTTGGTCCGTTTGAAACTGTGCACAAATGGAAGAAGTTGTCTGAGTGCTATGAATTTGTTGGAGCTAAACGGAGCAAGCACACAGCGGTGGCCTACAAGGACGCGATATATGTGTTCGGCGGCGATAACGGCAAGTTCATGCTCAACGACCTGGTTAGGTTCGACATCTGGGAGATGTCCTGGACCAAAGTGGGCTTCCAGGGCACCCCGCCAGCTCCGAGATACCACCACTCTGCTGTTGTGCATCGCTCGTCCATGTTCGTGTTCGGCGGCTACACGGGCGACATACTGGCCAACTCCAACCTCACCAACAAGAACGATCTGTTCGAATTCAAGTTCTCCAGCGCACAGTGGGTGCAGTGGAAGTTCCAGGGACAGGAGCCAGTGCCACGGTCGGCTCACGGCGCAGCAGTTTACGACGATAAGCTTTGGATTTTCGCCGGTTACGACGGCAACGCGCGGCTTAATGATATGTGGACCATCAACTTAGTGGGCGATAACCACCAATGGGAGCGCGTGGAGCAGAAAGGCCAATGCCCGCCCACCTGCTGCAACTTCCCCGTGGCGGTGGCGCGGGGCAAGATGTTCGTGTTCAGCGGGCAGAGCGGCGCCAAGATCACCAACGCGCTCTTCCAGTTCGACTTCGAGACGCACACTTGGAGCCGCGTGTGCACGGAGCACCTGCTGCGGTGCGCGGGCCCCGCGCCGGCGCGCCGCTACGGGCACGTGATGGAGGCGCACGGGCGCCACCTCTACGTGTTCGGCGGCGCCGCCGACAGCACTCTACCCAGTGACTTGCACAGCTTCGACCTGGACACGCAGATGTGGTCCGTTGTACACCCGGCACACGACTCGCAAGTCCCGGTCGGTCGACTGTTCCACGCGGGCGCCGTGGTCGGCGACGCGCTGTACGTGTTCGGCGGCACCGTCGACAACAACGTGCGCAGCGGCGAGCTGTTCTGCTTCCAGCTGTCTGACTACCCGCGCTGCACGCTGCACGACGACTTCGGCCGCATACTTAAATCCCAGCAGTTCTGCGATGTGGTAGTCCTTGTGGGGGTTGAAGAAAGTTGTGTCTTAGCACACCAAGCCCTGTTAGCTGCAAGGTCTACTTATTTACGTGCCAGAATACAGGAAGCGCGCGAAGAACTATCCCGACGCATAGACGAAGGCCTCGAAAAGCCCCTAGAAGTTTACGACTATAAGGCGAAACCGCGACTCACGCTAAAGTTACCTGAAGCCACACCAGAGGCGTTCGACATGGTGCTCAACTTCATATACACGGATCGGATCGACCCGCGCGAGAAATATGAAGACCCCGAAAAACCCTCCACAATCCTACAAGTAATGGAAGTCCTCCGCCTAGCGCTACGCCTAAACATTCCTCGCCTCCGCGGGCTATGCGCCCGCTTCCTCAAGGCCAACCTCTGCTACAGCAACGTGTTGCCAGCTCTCCACTCCGCGCACCACGCCCAGGTGCATTCCGTCAAGGAGTACTGCCTCAGATTTCTAGTAAAGGACTACAATTTTACGCAAATAGTGATGTCACCGGAATTCGAAACGATGGAAAAGAGTCTCATGGTGGAAATGATCCGTCGTCGCCACCGACCACAGGGCAAACCACCGGCGCCGCAGGAAAGCGACGAAGATATTATAGGAACAACCCTCGAGCAAGACATGTCCGTGTTCGTGGGTGGCGCCGGCGCGGGGCTGAGCGACGTGCGCCTGCGCGTGGGCGCCGCCTCGCGCCCCGCGCACCGCTCCATCCTCGCCGCGCGCGCCGCATACTTCGAGGCCATGTTCCGCTCCTTCTGCCCCAGCGACAACACCGTCAACGTGAGTGTACACACAGACCCGGCGTGTCCGTGGCGGCTGCGCCCGCGCACCGCTCCATCCTCGCCGCGCGCGCCGCATACTTCGAGGCCATGTTCCGCTCCTTCTGCCCCAGCGACAACACCGTCAACACCCGGCGTGTCCGTGGCGGCTGCGCCCGCGCACCGCTCCATCCTCGCCGCGCGCGCCGCATACTTCGAGGCCATGTTCCGCTCCTTCTGCCCCAGCGACAACACCGTCAACGTGAGTGTACACACAGACCCGGCGTGTCCGTGGCGGCTGCGCCCGCGCACCGCTCCATCCTCGCCGCGCGCGCCGCATACTTCGAGGCCATGTTCCGCTCCTTCTGCCCCAGCGACAACACCGTCAACACCCGGCGTGTCCGTGGCGGCTGCGCCCGCGCACCGCTCCATCCTCGCCGCGCGCGCCGCATACTTCGAGGCCATGTTCCGCTCCTTCTGCCCCAGCGACAACACCGTCAACGTGAGTGTACACACAGACCCGGCGTGTCCGTGGCGGCTGCGCCCGCGCACCGCTCCATCCTCGCCGCGCGCGCCGCATACTTCGAGGCCATGTTCCGCTCCTTCTGCCCCAGCGACAACACCGTCAACACCCGGCGTGTCCGTGGCGGCTGCGCCCGCGCACCGCTCCATCCTCGCCGCGCGCGCCGCATACTTCGAGGCCATGTTCCGCTCCTTCTGCCCCAGCGACAACACCGTCAACGTGAGTGTACACACAGACCCGGCGTGTCCGTGGCGGCTGCGCCCGCGCACCGCTCCATCCTCGCCGCGCGCGCCGCATACTTCGAGGCCATGTTCCGCTCCTTCTGCCCCAGCGACAACACCGTCAACACCCGGCGTGTCCGTGGCGGCTGCGCCCGCGCACCGCTCCATCCTCGCCGCGCGCGCCGCATACTTCGAGGCCATGTTCCGCTCCTTCTGCCCCAGCGACAACACCGTCAACGTGAGTGTACACACAGACCCGGCGTGTCCGTGGCGGCTGCGCCCGCGCACCGCTCCATCCTCGCCGCGCGCGCCGCATACTTCGAGGCCATGTTCCGCTCCTTCTGCCCCAGCGACAACACCGTCAACACCCGGCGTGTCCGTGGCGGCTGCGCCCGCGCACCGCTCCATCCTCGCCGCGCGCGCCGCATACTTCGAGGCCATGTTCCGCTCCTTCTGCCCCAGCGACAACACCGTCAACGTGAGTGTACACACAGACCCGGCGTGTCCGTGGCGGCTGCGCCCGCGCACCGCTCCATCCTCGCCGCGCGCGCCGCATACTTCGAGGCCATGTTCCGCTCCTTCTGCCCCAGCGACAACACCGTCAACACCCGGCGTGTCCGTGGCGGCTGCGCCCGCGCACCGCTCCATCCTCGCCGCGCGCGCCGCATACTTCGAGGCCATGTTCCGCTCCTTCTGCCCCAGCGACAACACCGTCAACGTGAGTGTACACACAGACCCGGCGTGTCCGTGGCGGCTGCGCCCGCGCACCGCTCCATCCTCGCCGCGCGCGCCGCATACTTCGAGGCCATGTTCCGCTCCTTCTGCCCCAGCGACAACACCGTCAACACCCGGCGTGTCCGTGGCGGCTGCGCCCGCGCACCGCTCCATCCTCGCCGCGCGCGCCGCATACTTCGAGGCCATGTTCCGCTCCTTCTGCCCCAGCGACAACACCGTCAACGTGAGTGTACACACAGACCCGGCGTGTCCGTGGCGGCTGCGCCCGCGCACCGCTCCATCCTCGCCGCGCGCGCCGCATACTTCGAGGCCATGTTCCGCTCCTTCTGCCCCAGCGACAACACCGTCAACACCCGGCGTGTCCGTGGCGGCTGCGCCCGCGCACCGCTCCATCCTCGCCGCGCGCGCCGCATACTTCGAGGCCATGTTCCGCTCCTTCTGCCCCAGCGACAACACCGTCAACGTGTGTACACTGTACAGTGGACAAATAGAGATCCGTGAGGTCCTGAACGTGACATGGCGAGCGGCAAATCAAGGCCATAACACCAGGCGCCAGGCCATTCATACATTACGCTCGATCAAATGTATGAACGGCCTTGATTTGTCGCTCGCCGCGCAGCGCGCTACTTGCGTCCAGTCTTCAGCCGTGAGGAGAGCAGACTGCAGTTTCAGGATCCGCAAAAATGCTGAGATCGACGATTTTGTGGCTGTTCCCCAATATTATCGGCGAGATAAAGACCCATTTCCTGCGCTGGCCCGGCCACTTCGTTACATTGTGAGGATCGCGACGCTAAAATGA
- Protein Sequence
- MQSREKMITEQLRNPNELDISLRMEFGPFETVHKWKKLSECYEFVGAKRSKHTAVAYKDAIYVFGGDNGKFMLNDLVRFDIWEMSWTKVGFQGTPPAPRYHHSAVVHRSSMFVFGGYTGDILANSNLTNKNDLFEFKFSSAQWVQWKFQGQEPVPRSAHGAAVYDDKLWIFAGYDGNARLNDMWTINLVGDNHQWERVEQKGQCPPTCCNFPVAVARGKMFVFSGQSGAKITNALFQFDFETHTWSRVCTEHLLRCAGPAPARRYGHVMEAHGRHLYVFGGAADSTLPSDLHSFDLDTQMWSVVHPAHDSQVPVGRLFHAGAVVGDALYVFGGTVDNNVRSGELFCFQLSDYPRCTLHDDFGRILKSQQFCDVVVLVGVEESCVLAHQALLAARSTYLRARIQEAREELSRRIDEGLEKPLEVYDYKAKPRLTLKLPEATPEAFDMVLNFIYTDRIDPREKYEDPEKPSTILQVMEVLRLALRLNIPRLRGLCARFLKANLCYSNVLPALHSAHHAQVHSVKEYCLRFLVKDYNFTQIVMSPEFETMEKSLMVEMIRRRHRPQGKPPAPQESDEDIIGTTLEQDMSVFVGGAGAGLSDVRLRVGAASRPAHRSILAARAAYFEAMFRSFCPSDNTVNVSVHTDPACPWRLRPRTAPSSPRAPHTSRPCSAPSAPATTPSTPGVSVAAAPAHRSILAARAAYFEAMFRSFCPSDNTVNVSVHTDPACPWRLRPRTAPSSPRAPHTSRPCSAPSAPATTPSTPGVSVAAAPAHRSILAARAAYFEAMFRSFCPSDNTVNVSVHTDPACPWRLRPRTAPSSPRAPHTSRPCSAPSAPATTPSTPGVSVAAAPAHRSILAARAAYFEAMFRSFCPSDNTVNVSVHTDPACPWRLRPRTAPSSPRAPHTSRPCSAPSAPATTPSTPGVSVAAAPAHRSILAARAAYFEAMFRSFCPSDNTVNVSVHTDPACPWRLRPRTAPSSPRAPHTSRPCSAPSAPATTPSTPGVSVAAAPAHRSILAARAAYFEAMFRSFCPSDNTVNVSVHTDPACPWRLRPRTAPSSPRAPHTSRPCSAPSAPATTPSTPGVSVAAAPAHRSILAARAAYFEAMFRSFCPSDNTVNVSVHTDPACPWRLRPRTAPSSPRAPHTSRPCSAPSAPATTPSTPGVSVAAAPAHRSILAARAAYFEAMFRSFCPSDNTVNVSVHTDPACPWRLRPRTAPSSPRAPHTSRPCSAPSAPATTPSTPGVSVAAAPAHRSILAARAAYFEAMFRSFCPSDNTVNVCTLYSGQIEIREVLNVTWRAANQGHNTRRQAIHTLRSIKCMNGLDLSLAAQRATCVQSSAVRRADCSFRIRKNAEIDDFVAVPQYYRRDKDPFPALARPLRYIVRIATLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -