Cstr007403.1
Basic Information
- Insect
- Cydia strobilella
- Gene Symbol
- Mblk-1
- Assembly
- GCA_947568885.1
- Location
- OX387695.1:3523429-3548486[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-15 7.2e-12 45.4 0.0 1 39 151 190 151 196 0.92 2 2 6.5e-19 1.1e-15 57.6 0.0 1 43 354 397 354 399 0.95
Sequence Information
- Coding Sequence
- ATGAAAAAAGTTTGTTTGTTTCAGAGTCCGGCCTCCGAGTCAGACAGTAGTTCCGTCTCCGGCGCGAAGAGTCCGGCCGCCGCTCCCCCTCAACTGTTGCAACACCTGCTACAGATGCAGCTGCAGGCGCAGAGTCCGCAGGCTATTGCACAGCTGCAGCAGATGATCGCGACGCTGGCCGCGCTGGGCACGGGGCTGGTACCACCAGCGCTGTCGCAGGCGTGGCTGATGCAGCGGCTAGCTCCCCGGCTCCCTGACAGGCTTCAAGATGTAGAAAAGGCATCAGCTCCGAGCGCCTCACCGACCTCGGCAGAACAGCCCCTGGATCTCAGCGCCAAGTCCACCTCCAGCACGAGCGGCACGCCACCGCCTGATGCCAAGGATAATGCCAGATTGAAACGCGCAATAATCGATGGCGGGGCCGGCAACAGCACCGCGCGGCGGAACTACACCGAAGATGAGCTCCAGTCAGCCCTCCGGGACATCCAATCCGGCCGGCTCGGGACCCGCCGGGCAGCCGTCGTCTACGGCATACCCCGGTCCACCCTCCGCAACAAGGTCAACAAGTTTGGACTCGCCGCGGAACCCGCCGACTCCGACCCCGACTCCGACCCTGAACGACCCGACTCGCCGCCCTCCGTCATCCTCAAAATACCCACATTCCCACCCCCTGACGATAAAAGCCCATCACCCGCAAACCCAGCGGCACCAGTCGCCCCTATAACTCCAATTCTACCACCACAACCACCTATGAATACACCATCTCCGCTCCTGCTGCCGGCGTCTGTCTTCGCTGATCCGCCTTCCTCTCAACATCTCTTCACGTCGTTGAGCGACGTTATAGCCAAGAGTATAAGCCAAAAGTTCCAACAGCCGCTAGAAAGGCCCCATGATTTTATGAGACTACAGCAAGACAGGCACGTTTCCGTCATCAAAACCCCACCAGACAACTCTAGAAATTATTCGGGTCCTAGTAACTCTCGCGCTCCCACGAACAACAACGGACAACCCGCTACGGGCAAGGGAACTAGACCTAAGAGAGGAAAATATAGGAACTACGATAGGGATAGCCTGGTAGAAGCGGTGAAGGCCGTGCAGAGAGGTGAGATGTCGGTTCACCGCGCCGGTTCGTACTACGGCGTGCCGCATTCAACTCTCGAATACAAAGTCAAAGAGCGGCATTTAATGAGGCCGCGTAAACGCGAGCCGAAGCCGCCTCAGGACGTGAAGCCGCAGCTTCCCAAGCCGCCGCCGCCGAAGCCGATGACCAAGCCGTTCACTAACGGTCTCAACGGGCCCGAGACGCCCGGGTATCCGCCGAGCTACTTCTGGCCGGGAGCCGGGTTCCCGGCCCCGCCCGCGCCGGACCTTTACGCGTCGCATATGATGCGTCGGCTCAGAGAAGAAGCGCCGCCGCCGGCGAACGGGAGTTTCCTGGAGGGAATCATAAGGTCGAGTCTGGAAAGGCCCGGTGCGGCGTTACTGCAACGGTTGACAGGGGAGCCGCGGCCGCCGGCGCCGAACTCAGACGCGCCGAGTCTCCTTCGGCGGCTAGCGGGAGGCGACGAGGAAGGTCCACCGGCGCGCCGAGCGCGCATCGACTCCTCAGACCGACAGCTCGCCACCGAAATGCGGGAGGCGGTCCAGCGGCTCCGAGCGGACAAGATGCGGCCCCGCAACGGGACGCCCACGCCGCCCACGTGCGGGGCGCTGTCGCCGCCGCCGCCGCCCGCGCTGCCCGCCGCGCCGCCCGACCGCGCCTAG
- Protein Sequence
- MKKVCLFQSPASESDSSSVSGAKSPAAAPPQLLQHLLQMQLQAQSPQAIAQLQQMIATLAALGTGLVPPALSQAWLMQRLAPRLPDRLQDVEKASAPSASPTSAEQPLDLSAKSTSSTSGTPPPDAKDNARLKRAIIDGGAGNSTARRNYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLAAEPADSDPDSDPERPDSPPSVILKIPTFPPPDDKSPSPANPAAPVAPITPILPPQPPMNTPSPLLLPASVFADPPSSQHLFTSLSDVIAKSISQKFQQPLERPHDFMRLQQDRHVSVIKTPPDNSRNYSGPSNSRAPTNNNGQPATGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDVKPQLPKPPPPKPMTKPFTNGLNGPETPGYPPSYFWPGAGFPAPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTGEPRPPAPNSDAPSLLRRLAGGDEEGPPARRARIDSSDRQLATEMREAVQRLRADKMRPRNGTPTPPTCGALSPPPPPALPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01133643;
- 90% Identity
- iTF_00660231;
- 80% Identity
- -