Basic Information

Insect: Cydia pomonella
Gene Symbol: Mblk-1
Assembly: GCA_033807575.1
Location: CM066364.1:11735569-11771933[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 1.5e-14 1.2e-11 45.4 0.0 1 39 164 203 164 209 0.92

2 2 2.4e-18 1.8e-15 57.6 0.0 1 43 367 410 367 412 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	1.5e-14	1.2e-11	45.4	0.0	1	39	164	203	164	209	0.92
2	2	2.4e-18	1.8e-15	57.6	0.0	1	43	367	410	367	412	0.95

Sequence Information

Coding Sequence: ATGTGCCGTCCTGAGTGGCGCAGGCTGGTGCAGGGCAATGTGCGCGATTTCGAGGAGCAAAGTAAAGCTGACCTCGACGCTAAACGCGATGAGCTGAAAACGCGCCAGCCTGCGTCCATTCACTACCACTACGTGgctggtgtcctcacgtgccctcaatgtgcacgggggttcacctcgaatatcggctacCTGCAGCAGATGATCGCGACGCTGGCCGCGCTGGGCACGGGGCTGGTTCCGCCAGCGCTGTCGCAGGCGTGGCTGATGCAGCGGCTAGCTCCTCGGCTTCCTGACAGACTTCAAGATGTAGAGAAGGCATCAGCGCCGAGCGCCTCTCCAACTTCTGCCGAACAGCCCCTGGATCTCAGCGCCAAGTCCACCTCCAGCACAAGCGGCACGCCACCGCCTGACTCCAAGGATAATGCCAGATTGAAACGCGCAATAATCGATGGCGGGGCCGGCAACAGCACCGCGCGGCGGAACTACACCGAAGATGAGCTCCAGTCAGCGCTCCGAGATATCCAGTCCGGCCGGCTCGGCACCCGCCGGGCGGCCGTCGTCTACGGCATACCCCGGTCCACCCTCCGCAACAAGGTCAACAAATTTGGACTCGCCGCGGAACCCGCCGACTCCGACCCTGACTCCGACCCTGAACGACCCGACTCACCGCCCTCTGTCATCCTCAAAATACCCACATTCCCACCTCCTGACGATAAAAGCCCGTCACCCGCAACCCCAGCGGCACCAGTCGCCCCTGTAACTCCAATTCTGCCGCCACAACCACCCCTGAATACACCGTCTCCGCTCCTCCTGCCAGCGTCTGTCTTCGCTGACCCGCCTTCCTCTCAACATCTCTTCACGTCGTTGAGCGACGTCATAGCCAAGAGTATAAGCCAGAAGTTCCAACAGCCGCTAGAAAGGCCTCACGACTTCATGCGACTTCAACAAGACAGGCATGTTTCTGTCATTAAAACCCCACCAGATAGCTCTAGAAATTTCTCGGCTCCTAGTAACTCTCGCGCTCCTACGAACAACAATGGACAACCCGCTACGGGCAAAGGAACTAGACCTAAGAGAGGGAAGTATAGAAACTACGATAGGGATAGCCTGGTAGAAGCGGTGAAGGCCGTGCAGAGAGGTGAGATGTCGGTTCACCGTGCCGGCTCTTACTACGGCGTGCCGCATTCGACTCTCGAATACAAAGTCAAAGAGCGGCATCTGATGAGGCCGCGTAAACGCGAGCCGAAGCCGCCTCAAGACGTTAAGCCGCAACCTCCAAAACCGCCGCCGCCGAAGCCGATGACCAAGCCGTTCACCAACGGTCTCAACGGGCCCGAGACGTCCGGATATCCGCCGAGCTACTTTTGGCCGGGAGCTAGCTTCCCGGCTCCACCCGCGCCGGACCTTTACGCATCGCATATGATGCGTCGGCTTAGAGAAGAAGCGCCACCGCCGGCGAACGGGAGTTTTCTGGAGGGAATTATAAGGTCGAGTCTGGAAAGGCCGGGTGCGGCGTTGCTGCAGCGGTTGACAGGGGAGCCGCGACCGCCGGCGCCAAGCTCAGACGCACCGAGTCTCCTTCGGCGGCTAGCAGGAGGCGACGAGGAAGGTCCGCCGGCGCGCCGAGCTCGCATCGACTCCTCGGACCGCCAGCTCGCCGCCGAGATGCGGGAAGCGGTGCAGCGGCTCCGAGCGGACAAGATGCGGCCCCGCAACGGGACGCCCACGCCGCCCGCGTGCGGGGCgctgtcgccgccgccgccgcccgcgccgcccgccgcgccgcccgaccGCGCCTAG
Protein Sequence: MCRPEWRRLVQGNVRDFEEQSKADLDAKRDELKTRQPASIHYHYVAGVLTCPQCARGFTSNIGYLQQMIATLAALGTGLVPPALSQAWLMQRLAPRLPDRLQDVEKASAPSASPTSAEQPLDLSAKSTSSTSGTPPPDSKDNARLKRAIIDGGAGNSTARRNYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLAAEPADSDPDSDPERPDSPPSVILKIPTFPPPDDKSPSPATPAAPVAPVTPILPPQPPLNTPSPLLLPASVFADPPSSQHLFTSLSDVIAKSISQKFQQPLERPHDFMRLQQDRHVSVIKTPPDSSRNFSAPSNSRAPTNNNGQPATGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDVKPQPPKPPPPKPMTKPFTNGLNGPETSGYPPSYFWPGASFPAPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTGEPRPPAPSSDAPSLLRRLAGGDEEGPPARRARIDSSDRQLAAEMREAVQRLRADKMRPRNGTPTPPACGALSPPPPPAPPAAPPDRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01133643;
90% Identity: iTF_00660231;
80% Identity: -