Cpom004014.1
Basic Information
- Insect
- Cydia pomonella
- Gene Symbol
- dl
- Assembly
- GCA_033807575.1
- Location
- CM066345.1:16940614-16968638[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-52 2.8e-48 165.4 0.0 1 125 74 201 74 214 0.95 2 2 1e-11 9e-08 33.5 0.0 123 169 306 353 291 353 0.89
Sequence Information
- Coding Sequence
- ATGACTAAGAGTGACGCCTCTGTTTTCTCCACAGACGCCCTGCAGGGTGTAACGCACAATGACGAAGAGGCTCCCCCCGACCTGAACATAAGTGAAGtgtTACATGCCATCTCGATAGCGGACCCGACGTTCGGCGTCGGCGTGGAAGAGATGTACCGGCAGCCGGCAGTGCCGCCGCCGTCGGCGCCGCAGCCCTCCGGGGCTCCCAAGATGCCCTACGTGCGGATCATCGAGCAGCCGGCCGGCAAGTCGCTGCGGTTTCGATATGAGTGCGAAGGCCGGTCAGCAGGCTCCATTCCTGGCGTGCACAGTACACCGGAGAAGAAAACATACCCCACAATCGAGGTGGTCGGCTACACGGGGCGATTTGTCGTGCTCGTGTCGTGTGTCACCAGGGACAAGCCTTACAGGCCGCATCCTCACAACCTGGTGGGCCGCGAACCGCTTTGCAACCGCGGCGTGTGCACCGTGGAGTGCAACGCGGACACCTCCATCGTGCAGTTCAGCAATCTCGGCATCCAGTGCGTCAAACGCAAGGACATCGCGGAGGCGCTGCGCGTGAGAGAGGAGATTAAAGTCGATCCCTTCAAGAGGCTTAAACAAGCAGATGCAGTTTTCCCGATGCTGTTCAACCTAGTGCTCGAGTATGTCATTAGGAAGGCCACAATTCCCGATGGCGGAGTGGAGTTGAATGGCAGACACCGGTTTGTTAGGTATGCCGACGACCTGGCCCTTCTAGGAGAAAGGGCTTGTCCGCAGAGCGGTCCAGAATCTAAAGGGGGAAGCTCTGAAGGTTGGGAGTCTTATTCTTGGAGAGCTAGGGAGCCGCCGTTGGACCTTGATCTCTTCCGCCGCCTTCCCTACTATCCTGCCCTACCTGGCAGGATAGCTCCAGTGCAACCTGTGGCTTCAATAACTGGCTTCAGTCACAAGAACCAACCCCAAAACATCGATCTGAATGCCGTCCGGCTGTGCTTCCAAGTGTACATCCCCGGTGGCAACACCAGCAAGATCAAGCAAGCGCTGATTCCGGTGGTGTCGGATGTCATCTACGACAAGAAGGCCATGTGCGAGCTGCAGATCAACCGGCTCAGCACGTGCGCGGCCAGCGTGCGCGGCGGCACTGAGCTCATACTGCTCTGCGAGAAGGTGACCCGCGACGACGTGGACGTGGTGTTCAGCCAGGCGTTCGACGACGGTTCCCTGTGGGAGGCGTCCGCCAACATCGTGCTGGTGCACAAACAGGTCGCCATCGCCTTCCAGGCGCCGCCCTACCGAGACCCCATGTGCATAGAAAACGTTAAGGTGAAGATATTCCTCAAACGAGTATCGGACGGCGCCCGCAGCGCGCCGGTGGACTTCGAGTACACGCCCGACTATGCAGGTACCACGCGCAAGGCGCTCTCCGACCGCGCCGTGCTCTCGCTGCTGCTCGCCGACCGCACCGACTCCAACAACAACGACGACAAGCGCGCCAGCTGCTCCAGCGACAGCGTCAGCGCCAGCGACTCCGGCGACAGCGGCGAGGCCGACATCGCCGACCTTAACGGCACCGCCTCCGACCCGCCCCTCGAAACCGAGAGGGGCCTCGACGAGCTCCTCGACCAGGTCGCGGAGCTCGACGAGATCTATACCGAGAATCGCACGCGTTTGCAGAACGTCGCCAGCGCGGAGAGCGAGGACGCCGACGACTTTAACGACGCCGGCACCTACACTAGCCTCCAGCTCGCGTTCAGGAACCCCGTTCTGATCTCCGAACCGGAGCAGTACGAGGATGTTCAGGTGCAGACGTACCGCGGCCCGATAATAGAATTTGCGCCCCTCAAGCGGGACACGGATGACGAGCGCGCTCCCCCTTTACCTCCCAAACGAGTTCGCAAAACTCCTTCGGTTGAGGGTTTTAAAACATCTCAGACTTCCGTGAACAGCTTCCTGAAGCCGGGTCGGCAGTTACCTATAACGCGTAACTTAGACACCAGCCGAACTGAACTTACCATGGCTAGGAGCGAACCGGCGTTGCCGCCTGCGCCTAAGAAGCGTTCCTTCCTCTCCCGTCTCTTTAGACGAAAGGAAAAGTCACCCGCACCTAGTATTAAATCTGAAGGCAAAGCGAGCAAGAAGAGTAAACCGGTGGGCCGCTCTGTCAGCAGCGTGTCCGGTGTGCGACCGTCCAAGTTCAAGTCGTCCGTGTCTCACACGTCTCTGAAAGATAACGCGTCCGGTACAGGCCTTAGCTATGCAGATAGCGTCACCCACATTTCGCTCCACGGGGATGACAATGAGAAGTCAACTTCCCAGACTCGTCTATCCCGGCCCGCGAGCTTACACCCCTTGCCCCCGACAGATGGCGATACCATCCTTGTGGCTGAAAGCGTTTTAGCCTTGGATGCTTCTCAGTTTAAAAAGCTCCAGGACGACTTGGATTTAACTGATGCCGAACACTACGCTTTATACATGGCGGTCGCCCCACACGCTACAGTGTCCGAGTTTGACGAAACTAGTTGTTACTACTCGCCGGTAGATGGAAGCAAATTTCAAAACTAA
- Protein Sequence
- MTKSDASVFSTDALQGVTHNDEEAPPDLNISEVLHAISIADPTFGVGVEEMYRQPAVPPPSAPQPSGAPKMPYVRIIEQPAGKSLRFRYECEGRSAGSIPGVHSTPEKKTYPTIEVVGYTGRFVVLVSCVTRDKPYRPHPHNLVGREPLCNRGVCTVECNADTSIVQFSNLGIQCVKRKDIAEALRVREEIKVDPFKRLKQADAVFPMLFNLVLEYVIRKATIPDGGVELNGRHRFVRYADDLALLGERACPQSGPESKGGSSEGWESYSWRAREPPLDLDLFRRLPYYPALPGRIAPVQPVASITGFSHKNQPQNIDLNAVRLCFQVYIPGGNTSKIKQALIPVVSDVIYDKKAMCELQINRLSTCAASVRGGTELILLCEKVTRDDVDVVFSQAFDDGSLWEASANIVLVHKQVAIAFQAPPYRDPMCIENVKVKIFLKRVSDGARSAPVDFEYTPDYAGTTRKALSDRAVLSLLLADRTDSNNNDDKRASCSSDSVSASDSGDSGEADIADLNGTASDPPLETERGLDELLDQVAELDEIYTENRTRLQNVASAESEDADDFNDAGTYTSLQLAFRNPVLISEPEQYEDVQVQTYRGPIIEFAPLKRDTDDERAPPLPPKRVRKTPSVEGFKTSQTSVNSFLKPGRQLPITRNLDTSRTELTMARSEPALPPAPKKRSFLSRLFRRKEKSPAPSIKSEGKASKKSKPVGRSVSSVSGVRPSKFKSSVSHTSLKDNASGTGLSYADSVTHISLHGDDNEKSTSQTRLSRPASLHPLPPTDGDTILVAESVLALDASQFKKLQDDLDLTDAEHYALYMAVAPHATVSEFDETSCYYSPVDGSKFQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00656910;
- 90% Identity
- -
- 80% Identity
- -