Cpom010526.1
Basic Information
- Insect
- Cydia pomonella
- Gene Symbol
- Su(H)_1
- Assembly
- GCA_033807575.1
- Location
- CM066348.1:20465676-20466542[-]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2 2.6e+04 -3.5 0.0 24 44 188 208 180 212 0.43 2 2 1.7e-31 3.9e-27 96.1 0.0 1 62 226 287 226 288 0.98
Sequence Information
- Coding Sequence
- ATGCCGCACCAGTTCGGCGCGGGCCTGGGCGGCGCGGTGGGCGCGGCGGGGGGCGggtcgccgccgccgcagcaCGGCGCGCTGTTCCCGCGGTACGCGAGCGCGGCGGGCCCCGGCGCCGGCGCCTACCGCCCCGAGGAGCGCCGCCTTACGCGCGAGGCTATGGAGCGCTACCTGCGAGACCGCGCCGACATGGTTGTCGTTATACTACACGCGAAAGTTGCACAGAAGTCCTATGGTAACGAGAAACGGTTTTTCTGCCCACCACCCTGTATATACCTATTTGGTGACGGCTGGCGGCTGCGGCGCGAGCGCATGCTCCGCGAAGGCGAAACAGAGCAGGCGGCCCAGCTCTGCGCCTTCATAGGCATAGGAAACTCTGACCAAGACATGCAGCAGCTCGACCTGAACAATGGGAAACAGTACTGTGCAGCTAAAACCCTGTACATATCAGACTCTGATAAACGAAAGCACTTTATGCTATCAGTTAAGATGTTCTATGGAAACGGCCATGACATTGGTATATTTAATAGTAAGAGAATTAAAGTAATATCTAAGCCTTCTAAGAAGAAGCAGTCATTGAAGAATGCAGACTTATGTATTGCGAGTGGTACGAAGGTAGCTTTATTCAATCGTCTAAGGTCACAGACAGTATCAACTAGATATCTGCATGTAGAGAATGGGAACTTCCATGCATCATCCACACAGTGGGGAGCATTCACGATCCACCTGCTGGATGATAATGAGAGTGAATCGGAGGAATTTGCAGTGCGGGACGGATATGTACACTATGGGTCCACTGTGAAGCTTGTTTGCTCTGTGACGGGCATGGCTTTGCCTAGGCTAATCATAAGAAAGGTAAGTTGA
- Protein Sequence
- MPHQFGAGLGGAVGAAGGGSPPPQHGALFPRYASAAGPGAGAYRPEERRLTREAMERYLRDRADMVVVILHAKVAQKSYGNEKRFFCPPPCIYLFGDGWRLRRERMLREGETEQAAQLCAFIGIGNSDQDMQQLDLNNGKQYCAAKTLYISDSDKRKHFMLSVKMFYGNGHDIGIFNSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVENGNFHASSTQWGAFTIHLLDDNESESEEFAVRDGYVHYGSTVKLVCSVTGMALPRLIIRKVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00148245; iTF_00008665;
- 90% Identity
- iTF_00148245;
- 80% Identity
- -