Cpom029067.2
Basic Information
- Insect
- Cydia pomonella
- Gene Symbol
- -
- Assembly
- GCA_033807575.1
- Location
- CM066362.1:8004620-8019184[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.00017 2.4 9.6 0.3 11 39 426 454 425 463 0.86 2 5 0.0002 2.9 9.3 0.2 11 39 458 486 456 491 0.90 3 5 0.00016 2.4 9.6 0.4 11 39 490 518 488 527 0.87 4 5 0.00019 2.8 9.4 0.2 11 39 522 550 521 557 0.89 5 5 1.2e-06 0.018 16.5 1.3 11 55 554 599 552 601 0.84
Sequence Information
- Coding Sequence
- ATGGAGCTGCAGGCATTGCTAGTGCTATGTGGTGTGGGGGTGGTGGTAGTGGCTGTGCTGCTGCTCATGGGGCTGTTCTCGGCCTCGGGCACCAGCTACGAGGAGGCCATTGCTCAGCAGCGCCGGGCCACCACTGAGCTTCTGGCTCTGgctgaaaacaaaaacaaacccAAGAAAAGCAACAAGAAAGCCATTAAAAAGCTAGCACGGAAGGAGAAGAATAAGGAAAATGCAGTGACTACTGGCAGTGAGGTGGAGAGTGAGGCTCCAGCCGAGAGTGGTGTGGATGAAGACACTGTGCCTCCGGCTAAGCCTCATGTTGAGTTCTGTCCCCCTGTTGTTGTAGATGTTCTTAGGGATACTCCACCCAATGTAAAGATTCGCAAACGCGGCAAGGATCCTAAAGTAAAGCCGATACTGATAAACAAAGAGGATCCGAGCTGCATTAGTGATCCGAGCACGCCGCCCTCCCCTACCGGCTCTGTCTCCAACCACTTTGAGGAGATCCATCCCAAGGATGAGTTTGAACTATTGCAATCCTCTCTCGCTGCCGAAAAAACTCCCGAGAAAAAAGAAGAAGTGGTTGAGAAGAAGGAGAAGCCCGCGAAGGCAGCGaaggccggtaaaggcaagcagCCCGCGCCCGAGCCCGTCAAGGAGGAGCGCGAGCGCCACAACAGTGGCGAGGCGCCCAAGGAACAACGCAAGGGTAAAAAGGTGGACAAAAAACAAGCCGAAGATGAGGCTCGAGTGGAGGTGGTCCCCCCGCTGAACGTGCCGCAGCCTAGCGAGCTCACCACCGACAAGCTACTCAAGCAGGCGctggccgccgcgcccgcgcccgcgcccgtcCCCGCTTCCGcctccgcgcccgcgcccgcctcTGCGCCCGTTCCCACCGGCAAGAACAAGAAGAAGAAGCCCGAACCTAATGTGCTTTCGCTTATGGCCGGTGACGGCGGCGGCGTCAACGTTGGCGAGCTCGTCCGAGTAGTGCGCGACGCGGCGCTCTCCCGCACCGAGATACAGATCCTCACCGACGCGCTGCTCAACAAGCACCACGACCCGCTGCCGCAGCACTCCGAGTGGACCGAGGGACCTAACGACCCGATGCAGAAGCTGAAGAAGCAACTCGCCGACAAGGAGAAAGCTCTGGCCGACGAACTCGAGGCTTCCCAAGCACTGCACGCTAAACTGAAGGAATTGAGGGCCACACTGAACGCGGAGcgcgggcgcgcggcggcggcgacgcgcGCGCACGAGCAGGCGGCCGAGGCCGCGCGCGCAGAGATACACACGCACCAGACGCGCGTCAAGCGCCTCGCCGACGACAACCACCAGCTGCAGCAGGAGAACAGGCTCGCGGCCGAGGCCGCGCGCGCAGAGATACACACGCACCAGACGCGCGTCAAGCGCCTCGCCGACGACAACCACCAGCTGCAGCAGGAGAACAGGCTCGCGGCCGAGGCCGCGCGCGCAGAGATACACACGCACCAGACGCGCGTCAAGCGCCTCGCCGACGACAACCACCAGCTGCAGCAGGAGAACAGGCTCGCGGCCGAGGCCGCGCGCGCAGAGATACACACGCACCAGACGCGCGTCAAGCGCCTCGCCGACGACAACCACCAGCTGCAGCAGGAGAACAGGCTCGCGGCCGAGGCCGCGCGCGCAGAGATACACACGCACCAGACGCGCGTCAAGCGCCTCGCCGACGACAACCACCAGCTGCAGCAGGAGAACAGGCTCCTTCAATCTAAACTCGCCGCGGAGGGTGAATTCCAACAACAGAGAGCACAGATGGAGATGCACATACAGCAACTTTCTGAGGCCGAGGCGACGCTGGTGGCGCAGCTGCAGGGGCTGCAGACGGAgctggcggcgcgcgcgctcgaGGTGGCTGGTGCCCGTTGTGATGCAGGCGCAGCCAGAGACGCCGCCATCATGGCGCAGCAGCACGCCGCCGAGCTCGCCCAGCAGCTGGAGCAGCTCTCCCACGACCACACCCGCGCCATGCAGGAGCGACAAGCCGGTATGTAG
- Protein Sequence
- MELQALLVLCGVGVVVVAVLLLMGLFSASGTSYEEAIAQQRRATTELLALAENKNKPKKSNKKAIKKLARKEKNKENAVTTGSEVESEAPAESGVDEDTVPPAKPHVEFCPPVVVDVLRDTPPNVKIRKRGKDPKVKPILINKEDPSCISDPSTPPSPTGSVSNHFEEIHPKDEFELLQSSLAAEKTPEKKEEVVEKKEKPAKAAKAGKGKQPAPEPVKEERERHNSGEAPKEQRKGKKVDKKQAEDEARVEVVPPLNVPQPSELTTDKLLKQALAAAPAPAPVPASASAPAPASAPVPTGKNKKKKPEPNVLSLMAGDGGGVNVGELVRVVRDAALSRTEIQILTDALLNKHHDPLPQHSEWTEGPNDPMQKLKKQLADKEKALADELEASQALHAKLKELRATLNAERGRAAAATRAHEQAAEAARAEIHTHQTRVKRLADDNHQLQQENRLAAEAARAEIHTHQTRVKRLADDNHQLQQENRLAAEAARAEIHTHQTRVKRLADDNHQLQQENRLAAEAARAEIHTHQTRVKRLADDNHQLQQENRLAAEAARAEIHTHQTRVKRLADDNHQLQQENRLLQSKLAAEGEFQQQRAQMEMHIQQLSEAEATLVAQLQGLQTELAARALEVAGARCDAGAARDAAIMAQQHAAELAQQLEQLSHDHTRAMQERQAGM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -