Basic Information

Insect: Cydia fagiglandana
Gene Symbol: -
Assembly: GCA_963556715.1
Location: OY750815.1:6004085-6044159[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.085 5.4 8.7 0.1 2 23 495 516 494 516 0.93

2 17 0.1 6.5 8.4 0.1 1 23 526 549 526 549 0.95

3 17 0.37 23 6.7 4.0 2 23 729 750 728 750 0.95

4 17 2 1.3e+02 4.3 0.8 1 23 762 786 762 786 0.90

5 17 2.7e-05 0.0017 19.7 1.0 1 23 792 816 792 816 0.99

6 17 0.072 4.6 8.9 0.2 1 23 822 844 822 844 0.93

7 17 0.0047 0.3 12.6 3.4 1 23 850 872 850 872 0.98

8 17 8.6 5.5e+02 2.4 0.6 11 23 900 912 897 912 0.90

9 17 0.45 29 6.4 0.2 1 23 1018 1040 1018 1040 0.97

10 17 4 2.6e+02 3.4 7.2 1 23 1047 1069 1047 1069 0.95

11 17 0.0027 0.17 13.4 1.8 1 23 1108 1131 1108 1131 0.95

12 17 0.19 12 7.6 1.1 1 23 1138 1161 1138 1161 0.97

13 17 0.0075 0.48 12.0 0.2 2 23 1182 1204 1181 1204 0.96

14 17 0.22 14 7.4 1.3 3 23 1229 1249 1228 1249 0.85

15 17 7.9e-05 0.0051 18.2 2.1 1 23 1261 1283 1261 1283 0.97

16 17 0.00038 0.024 16.1 0.1 1 23 1289 1311 1289 1311 0.97

17 17 0.03 1.9 10.1 1.5 3 23 1319 1340 1319 1340 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.085	5.4	8.7	0.1	2	23	495	516	494	516	0.93
2	17	0.1	6.5	8.4	0.1	1	23	526	549	526	549	0.95
3	17	0.37	23	6.7	4.0	2	23	729	750	728	750	0.95
4	17	2	1.3e+02	4.3	0.8	1	23	762	786	762	786	0.90
5	17	2.7e-05	0.0017	19.7	1.0	1	23	792	816	792	816	0.99
6	17	0.072	4.6	8.9	0.2	1	23	822	844	822	844	0.93
7	17	0.0047	0.3	12.6	3.4	1	23	850	872	850	872	0.98
8	17	8.6	5.5e+02	2.4	0.6	11	23	900	912	897	912	0.90
9	17	0.45	29	6.4	0.2	1	23	1018	1040	1018	1040	0.97
10	17	4	2.6e+02	3.4	7.2	1	23	1047	1069	1047	1069	0.95
11	17	0.0027	0.17	13.4	1.8	1	23	1108	1131	1108	1131	0.95
12	17	0.19	12	7.6	1.1	1	23	1138	1161	1138	1161	0.97
13	17	0.0075	0.48	12.0	0.2	2	23	1182	1204	1181	1204	0.96
14	17	0.22	14	7.4	1.3	3	23	1229	1249	1228	1249	0.85
15	17	7.9e-05	0.0051	18.2	2.1	1	23	1261	1283	1261	1283	0.97
16	17	0.00038	0.024	16.1	0.1	1	23	1289	1311	1289	1311	0.97
17	17	0.03	1.9	10.1	1.5	3	23	1319	1340	1319	1340	0.95

Sequence Information

Coding Sequence: ATGACGGAGGAGCAGCCTCCACTGATGCTCTGCTTAGAGAATGCGGCCGGTGAGGAGGTGTCGCTCAACATTGAACCTAACGACGACTTCCACTCCTTCCTGATAAAGGCCAATGCATTACTTGGTTACGAAGTAGACCTAAATTCATTAACCAGAAACAAGCCGGTGGCCTTAACAGACAATATTTACCAATTCCTGTTAAATTCTGAAAACGGCCTCCTAGAATACCCTATGGGACAAACATATGATCAAATGTTAGAACCAAGCGATGCCAATGATGGCTTAGAATATGTCCTAGGCGATGGAACACAAATCAAAGCTTCACAGATCCATTTCGACAATGAGGATCCACCTTTTGATTTTGTAGCAGAAAAAATAccatttgttaaatatgttgaTGATTATATAGATGATGCTGAACCATCAAACGAAATTAGCACGAAAATGATCAATATAGTCGCTAGCCCTGTGTCTAAATGGCCAAGTGCGTCAAGCCCAAAAAAACCATTCATAAACAGCATACCTTTTAAACTGGTTAACAATAATGCTTCAGGATTTGCAGCACAATTCCACAAATTCGTAGAATCTAGTATTGATAAAACATTTACGCCGCTTAATCCAGTTACAACTAGAAATAAGTCTCCGAGAAGTCTTATTAGAGACAACTATAATAAATATGAGGACaacatttataataaaaatgatTTCATAACACGAGATGaagttttaaatatgtttaaagATACTCCGGTAGTACCTTATGAGAGTCAAAGCTTCAGTGATAAGAGGAGACGCAAAACTGACCCTTCACGCCCTATTAATAAGACTGCGAATGCTAAAACTATGCCGTACATAGATGTGGATGGTACTTTAATAGGTCAAAATGAGAGCCGGAACTGCTTCATCTGTGAGAAATTCGTTAATAACAATATGGATAAgctttatttatttgacaatgAAGATCAGAAACTACACAGATCATCTCCGCAAAAGAAATTATCCACCCAATTGAAAATTATCTGTGAACAATGCTTAGACAATAATTTTAAACCATCTAGATTAAAAAGCCCCAGCAAAAATCTAAATCCAGACGAATATTTGGTAATTAGGAACAACCAGCAGTATatatttcagaaaacaaattccatagactttaaaaatataaaaagcagTTTCGTGAACATTGGTGAAGCAACAGCTATAATAGATAAAATAGAAACAGAAATCTTGAAAGGAAATCAAGTGAAACAAACTGATTTTGTCAAAGTTGAAATCGATTCGAATGGAGAAATCATATCTAAAGATGATGCGAAAGAATCAAATTCAGAATCATATATTTTCAAAGATGGCAGCTCTAGTGATGTTGAAATAATTGAGGGACCGGAAATAGACGATGTCATAGACAATTTAGAGGAAGCCGATGAGGAAGTAAAGGAGTTTTTAGGGATGTATCAGAGTGACAATAATGATATTAGTGAACTTAAATGCAGGTTTTGCGAGCGCGTCTTTACAGAGTTGGCTGAGTTGATGGAGCATGGTGACGTTCACAAACACGTGACGGAAGATGGCGAGGTGTACCCGTGCCCTTTGTGTTTTTACGGATACGCCAATTTTAAATGGCTTAAAGGCCATCTTAAAGCAGCCCACGATAAACCTAAGAAGTCTCCAGCAGAAGGCACTAACGAGGATGCAAATGATGAATCGCAGTCACCATCTGAGCAGTCGCCAGTGGCTAAAAGAACTAGGAGTAACGATAAGAAAAATACCGAGGGCGACAAAGATGATGCAGTAAAGTCAGAGGATGAACCTACAAAATCGGTGGAACCTGAAAATGATAAAGAGGAGTGCAAAATGGAAATTAAGTTGGAAATAAAGCAGGAAGCGTTAGATACCAGCGACGAGGAAGCGATATGGATCGTGCATACTGACGACACGCCGGCCGATCAGCTGCACTCCCTTCTGCATATCATGGTGGATATGTCCACGCATAAATGCAAGAAGCGAGCCCGGAAACGAAAGTGCTCGGGCAAGGACGAAAACGTCACTTTATCCTCTCAGAAGGACGGTGTAAAGAGGCCACAAGGTAGACCGAGACAAGGCACGGACTCTGGTGACAATGATTTACTGGTACCCAGGCCTCGTAAGAAGAAAGCCGCAGAGCCGACATCGGATCCCCAGATCATGACGTGCCATAATTGCAATGAGTCCTACACGTCCAAAGTACGCTTGAAGTTTCACATGCAATTCCACGACAAGACAGAGATGCTGAACGCCAACGGGCAGTACACGTGCCTCGAGTGTCCCGGGGTCACTTTCACGACAGAGACGGAGCTATTCGACCACGTGCACTTCCAACATGACAAGCAGAACCGCTATCAATGCCCTGTCAAGGATTGTGGGAAGACATTCTTTCTCAGAGCGTCTCTGACGAAACACAGCCGCACGCACACAGACACACGGCGCTACGTTTGCGGCACTTGCGGCAAGAGGTTCCTGGACAAACAGACTTTGGACGAACACGGAGTCACACACTTACAAATCAAACCATACCAATGCCACATCTGCATGAAGCAGCTGACTCGCCGCTCTCGCTTGCGCATGCACATGCGCGCGCACGAGGAGTCGCTCTGTCCCGCTCTAGTGCCCGTCTGCGCCGCCTGCCGCCGCGCCTTCCAGAACGTTCCTGCGGCTGTGCTGACTCGCCGCTCTCGCTTGCGCATGCACATGCGCGCGCACGAGGAGTCGCTCTGTCCCGCTCTAGTGCCCGTTTGTGCCTGCCGCCGCGCCTTCCAGAACGTTCCTGCGGCTGTGGAGCATGTGAAGAAGTCACCAGAGTGTCTGGGGGCATTCGCGTGCGATTTGAACGAAGATGAAAAGCCGGCCGCCGTGTTGTCGCCCACTAGTGGACTAGTTCGACCCACGCTGGAAGAGCCACCGGGCCAACAGTTCCGCATAGAGCGCGAAGCCCAGTGCGCGGGCGCCGCCGCGCTGCTGGCGCCGCTCCCCGCGGCCCTGCGCGCCGCCGTGCGAGCCGTCAAAGTGGACAAGGCGTTCCGGTGCGAGTTCTGCGAGGACGTGTTTTACCTGGAGGAGGATTTGAACAGCCACCGAGCTATCCATAAAGGGGTCAAGAATCCTTTCACTTGCCACATCTGCAAAGTCAGTTTCGCCACATATTCTAGATGTACAACACACAAAACTACCCACGGCTTTTACAAGCGCCCTCTAGCGGACGTGAAGAGCGAGGGGCCGAGCCGAGCGGACTCCGGCCCGTCGGCGCGCGGCGTGCTAGGCTACGGGGGGTTCCCTGTCGTCAAACATTTCCTGTGTGAGGACTGCGGGCGGTCATATCTGCACTGGACGTACTTGCAAGTGCATCGGAGGATGAAACACGCTAATGAGAATTTCATCTACAAATGCATACACTGTGAGGAGACCTTCCCTAATAGTTGGAGCGTGGCGTACCACAGAAAGAAGGTGCACGGCAAACCGACAGACAAGGGCAACGGAGCCACCAAAACTGTCCACACCGACTACAGAATCCCATGCCGCGACTGCGACGAAGTTTTGCCAAACAAAACTGCGCTCTATAAACATAGGAAGAAGGAGCACAGTTACGTGGCATTGCCGATCAATGATAATCAAGGGTTGGGTGGTCAGCCGCACACGGAGGCGCGTGCGGCGTGCACGCACTGCGGGCTCAGCTTCCCCGCAAACCTGCTCTCACACCATCTCAAAGAGGTCCACGGGCAAGAGGCGCAGTACCCGGCCACCCGGTCACACACCTGCACCGTTTGTGGCCACGCCTTCCGCACTGCGTCCATGCTTAATGAACACTCCAGGATTCACACCGGAGAGCGGCCGTTTCCTTGCGACGTGTGTGGGGTGGCTTTTAGAAGAGCGACGGCGATGCGCAACCACCGTCTGATCCACACGGGCGTGCGAGCGTGGGGCTGTGCGCGCTGCCCGAAGCGTTTCCGGATCCGGTCCGACCTCAACACGCACTCGAGACTCAAGCATCCCTTGCATTTTGCTGTCATCGAGGTGCCCGGCCTGGAGCCGAGCCCGGAGCAGGTGGCGCAGGCGCTCGCCGTGAACAATATCGCCCGAGAGAGCGTCCTAGAAATCACTAAGGTTTCCTTCCCCAAGGGCGCGCGCCACGTGGTGCcggccggcgcgcgcgcgctggcgctgctggcggcggcgcgccgcccCGTGCCCTGGGCGCGTCTcccccaccaccaccaccaccaccacgacGACTACGCCGCCGcgGAAATGGCGAGCATGCCATACGCACGACGCGGCCGCGGTATCGCCAGGAACACTCGCTTCTTGGGCCCCCCCTCACAAGTACAGGACCTGACAGGCTTGAACGTCGAGATGCTACTCCAAGACAACCTGCTCGAGCAATCCGCGCTCGGCGCTCGACAGATGCTCGACCCCATGCTACTGTTCAACACCCCGCCACAGCAGATGCAGGCTGACGTCAACCATTAA
Protein Sequence: MTEEQPPLMLCLENAAGEEVSLNIEPNDDFHSFLIKANALLGYEVDLNSLTRNKPVALTDNIYQFLLNSENGLLEYPMGQTYDQMLEPSDANDGLEYVLGDGTQIKASQIHFDNEDPPFDFVAEKIPFVKYVDDYIDDAEPSNEISTKMINIVASPVSKWPSASSPKKPFINSIPFKLVNNNASGFAAQFHKFVESSIDKTFTPLNPVTTRNKSPRSLIRDNYNKYEDNIYNKNDFITRDEVLNMFKDTPVVPYESQSFSDKRRRKTDPSRPINKTANAKTMPYIDVDGTLIGQNESRNCFICEKFVNNNMDKLYLFDNEDQKLHRSSPQKKLSTQLKIICEQCLDNNFKPSRLKSPSKNLNPDEYLVIRNNQQYIFQKTNSIDFKNIKSSFVNIGEATAIIDKIETEILKGNQVKQTDFVKVEIDSNGEIISKDDAKESNSESYIFKDGSSSDVEIIEGPEIDDVIDNLEEADEEVKEFLGMYQSDNNDISELKCRFCERVFTELAELMEHGDVHKHVTEDGEVYPCPLCFYGYANFKWLKGHLKAAHDKPKKSPAEGTNEDANDESQSPSEQSPVAKRTRSNDKKNTEGDKDDAVKSEDEPTKSVEPENDKEECKMEIKLEIKQEALDTSDEEAIWIVHTDDTPADQLHSLLHIMVDMSTHKCKKRARKRKCSGKDENVTLSSQKDGVKRPQGRPRQGTDSGDNDLLVPRPRKKKAAEPTSDPQIMTCHNCNESYTSKVRLKFHMQFHDKTEMLNANGQYTCLECPGVTFTTETELFDHVHFQHDKQNRYQCPVKDCGKTFFLRASLTKHSRTHTDTRRYVCGTCGKRFLDKQTLDEHGVTHLQIKPYQCHICMKQLTRRSRLRMHMRAHEESLCPALVPVCAACRRAFQNVPAAVLTRRSRLRMHMRAHEESLCPALVPVCACRRAFQNVPAAVEHVKKSPECLGAFACDLNEDEKPAAVLSPTSGLVRPTLEEPPGQQFRIEREAQCAGAAALLAPLPAALRAAVRAVKVDKAFRCEFCEDVFYLEEDLNSHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRPLADVKSEGPSRADSGPSARGVLGYGGFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFIYKCIHCEETFPNSWSVAYHRKKVHGKPTDKGNGATKTVHTDYRIPCRDCDEVLPNKTALYKHRKKEHSYVALPINDNQGLGGQPHTEARAACTHCGLSFPANLLSHHLKEVHGQEAQYPATRSHTCTVCGHAFRTASMLNEHSRIHTGERPFPCDVCGVAFRRATAMRNHRLIHTGVRAWGCARCPKRFRIRSDLNTHSRLKHPLHFAVIEVPGLEPSPEQVAQALAVNNIARESVLEITKVSFPKGARHVVPAGARALALLAAARRPVPWARLPHHHHHHHDDYAAAEMASMPYARRGRGIARNTRFLGPPSQVQDLTGLNVEMLLQDNLLEQSALGARQMLDPMLLFNTPPQQMQADVNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00412866;
90% Identity: -
80% Identity: -