Cfag004223.1
Basic Information
- Insect
- Cydia fagiglandana
- Gene Symbol
- -
- Assembly
- GCA_963556715.1
- Location
- OY750791.1:29236723-29246293[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.0014 0.47 11.7 0.0 71 103 1 33 1 37 0.93 2 7 0.0002 0.069 14.3 0.0 64 103 35 74 32 78 0.89 3 7 0.0039 1.3 10.2 0.0 64 102 76 114 73 117 0.89 4 7 3.5e-06 0.0012 20.0 0.1 63 102 116 155 114 158 0.92 5 7 1e-05 0.0036 18.5 0.0 63 103 157 197 155 201 0.92 6 7 0.0034 1.2 10.4 0.0 64 103 199 238 196 241 0.89 7 7 3.8e-06 0.0013 19.9 0.0 63 101 239 277 237 284 0.92
Sequence Information
- Coding Sequence
- ATGTACACGGGGGAGGTCACGGCGTCTAAGGAGATGCTGCCGTCGCTGCTACGGCTCGCGCAGACCCTCAAGGTGTCCGGGCTGACCGATGCTGACACTGAACTGCGACTATGGCTGACTCTCATGTACACGGGGGAAGTCACGGCGTCTAAGGAGGTGCTGCCGTCGCTGCTACGGCTCGCGCAGACCCTCAAGGTGTCCGGGCTGACCGATGCTGACACTGAACTGCGACTATGGCTGACTCTCATGTACACGGGGGAAGTCACGGCGTCTAAGGAGGTGCTGCCGTCGCTGCTACGGCTCCCGCAGACCCTCAAGGTGTCCGGGCTGACCGATGCTGACACTGAACTGCGACTATTGCTGACTTTCATGTACACGGCGGAGGTTACGGCGTCTAAGGAGGTGCTGCCGTCGCTGCTACGGCTCGCGCAGACCCTCAAGGTGTCCGGGCTGACCGATGCTGACACTGAACTGCGACTATTGCTGACTCTCATGTACACGGGGGAGGTCACGGCGTCTAAGGAGGTGCTGCCGTCGCTGCTACGGCTCGCGCAGACCCTCAAGGTGTCCGGGCTGACCGATGCTGACACTGAACTGCGACTATGGCTGACTCTCATGTACACGGGGGAAGTCACGGCGTCTAAGGAGGTGCTGCCGTCGCTGCTACGGCTCCCGCAGACCCTCAAGGTGTCCGGGCTGACCGATGCTGACACTGAACTGCGACTATTGCTGACTTTCATGTACACGGCGGAGGTTACGGCGTCTAAGGAGGTGCTGCCGTCGCTGCTACGGCTCGCGCAGACTCTCAAGGTTTCCGGGCTGACCGATGCTGACACTAACCCAACCCCACAACCAGCCGAGTCAGAGCCGCAGGAACCCCGACAATCCCCAACTTTTGAGCCCAAGCCGGACTTTACCGAACCAAAAATCTTCGACGAGCCAATGGAGAAAGAATACGCGAGCGGGATGAACGATGTGATCAGAAACGAGAAGGACAGACTGAGCAAGTTGGATCAGATTGTGCAGAATTTATATAGTACACATAAGATTGGCGGTCCAGTTGGGAATATGACGCCTCCGATTATGCCTAATTTAGCAGATCCCCCAGAGCCGTTCGATCGCAAATGGCGGCTCAACAGCTCAGTGTGCACCATCTGTCACAAGCGGCTCAGCAACCAATACAACCTGCGCGTGCACATGGAGACGCACGCGGGGCGGCGGCACGCGTGTCGCGCCTGCAGCCACGTGTCGCGGTCGCGCGACGCGCTCAGGAAACACGTCGCCTACCGACACGCCACTAACAGAGATAAGGCGGTCTGA
- Protein Sequence
- MYTGEVTASKEMLPSLLRLAQTLKVSGLTDADTELRLWLTLMYTGEVTASKEVLPSLLRLAQTLKVSGLTDADTELRLWLTLMYTGEVTASKEVLPSLLRLPQTLKVSGLTDADTELRLLLTFMYTAEVTASKEVLPSLLRLAQTLKVSGLTDADTELRLLLTLMYTGEVTASKEVLPSLLRLAQTLKVSGLTDADTELRLWLTLMYTGEVTASKEVLPSLLRLPQTLKVSGLTDADTELRLLLTFMYTAEVTASKEVLPSLLRLAQTLKVSGLTDADTNPTPQPAESEPQEPRQSPTFEPKPDFTEPKIFDEPMEKEYASGMNDVIRNEKDRLSKLDQIVQNLYSTHKIGGPVGNMTPPIMPNLADPPEPFDRKWRLNSSVCTICHKRLSNQYNLRVHMETHAGRRHACRACSHVSRSRDALRKHVAYRHATNRDKAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -