Cfag027363.1
Basic Information
- Insect
- Cydia fagiglandana
- Gene Symbol
- LZTR1
- Assembly
- GCA_963556715.1
- Location
- OY750810.1:10967807-10993800[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.4e-16 2.2e-13 51.3 0.0 4 109 220 356 217 357 0.88 2 4 1.9 6.5e+02 1.5 0.0 78 108 357 387 354 389 0.87 3 4 1.4e-15 4.9e-13 50.2 0.0 10 97 452 539 448 554 0.83 4 4 3.4 1.2e+03 0.7 0.0 77 106 553 582 547 585 0.79
Sequence Information
- Coding Sequence
- ATGAGAATTGTGTTTTTCAGGGAGCCAGTGCCGCGGTCAGCGCACGGCGCAGCAGTTTACGATGACAAGCTGTGGATCTTCGCCGGGTACGACGGCAATGCGCGGCTCAACGACATGTGGACCATCAACTTAGTGGGCGACAACCACCAATGGGAGCGCGTGGAGCAGAAAGGTCAATGCCCCCCCACCTGCTGCAACTTCCCCGTGGCGGTGGCGCGGGGCAAGATGTTCGTGTTCAGCGGGCAGAGCGGCGCCAAGATCACCAACGCACTCTTCCAATTCGACTTCGAGACGCACACTTGGAGCCGCGTCTGCACAGAGCACTTGCTCCGCTGCGCGGGtcccgcgccggcgcgccgctaCGGACACGTGATGGTGTCCCACGGACGGCACCTCTACGTCTTCGGAGGCGCCGCCGACAGCACCCTACCCAGTGACTTGCACAGCTTCGACCTTGACACTCAGATGTGGTCGGTGGTACACCCGGCGCACGACTCGCAGGTGCCGGTGGGGCGGCTGTTCCACGCGGGCGCCGTGGTGGGCGACGCGCTGTACGTGTTCGGCGGCACCGTCGACAACAACGTGCGCAGCGGGGAGCTCTTCTGCTTCCAGttGTCAGACTACCCGCGCTGCACTCTCCACGATGACTTCGGCCGCATACTTAAATCCCAGCAGTTCTGCGACGTGGTAGTCCTGGTGGGAGTTGAAGAGAGCTGCGTGCTAGCACACCAGGCGCTGTTAGCTGCCAGGTCTACATACCTACGTGCCAGGATACAGGAAGCGCGCGAAGAACTATCCCGACGCATAGACGAGGGCCTCGAAAAGCCCCTAGAAGTATACGACTACAAGGCGAAGCCGCGGCTCACGCTAAAGTTACCTGAAGCCACCCCGGAGGCGTTCGACATGGTGCTCAACTTCATATACACGGACCGGATCGACCCGAGCGAGAAATACGAGGACCCTGAAAAGCCCTCCACCATTTTACAAGTAATGGAAGTCCTCCGCCTAGCACTACGCCTGAACATTCCTCGCCTCCGTGGGCTATGCGCCCGCTTCCTCAAGGCCAACCTGTGCTACAGCAACGTGTTGCCAGCTCTCCACTCCGCGCACCACGCCCAGGTGCATTCCGTCAAGGAGTACTGTCTCAGATTTCTAGTCAAGGACTACAATTTTACGCAAATAGTGATGTCACCAGAATTCGAAACGATGGAAAAGAGCCTCATGGTGGAAATGATCCGTCGTCGGCACCGACCACAGGCCAAACCACCGGCGCCGCAAGAGAGCGACGAAGATATTATAGGAACAACCCTCGAGCAAGACATGTCCGTGTTCCTGGGCGGCGCCGGCGCAGGCCTGAGCGACGTGCGGCTGCGCGTGGGCGCCGCGTGGCGCGCCGCGCACCGCTCCATCctggccgcgcgcgccgcctacTTCGAGGCCATGTTCCGCTCCTTCTGTCCCACAGACAACACAGTCAACATTCAGATATGCGACACGGTGCCTTCAGAGGAGGCTTTCGACTCGCTGCTGCGCTACATTTACTATGGAGACACCAACATGCCTACGGAAGATTCGCTCTATTTGTTCCAAGCTCCCATTTATTACGGTTTCACTAACAACCGTCTCCAAGTATTCTGCAAGCACAATCTACAGAGCAATGTCACCCCGGACAACGTGTTAGCGATATTACAAGCGGCGGACCGAATGCGCGCCGCCGACATCAAGGAATACGCGCTCAAGATGATCGTCCACAACTTCTACCAGCTGGCCCACCAGGAGTCCATAAAGACCCTCCCGCAACCCCTGCTGGTCGACATCGTGGTGGCGCTGGCCACCGCGCGCCGCGCCGACTCCCCCCTCCCCGCGCAGCCGCGCTCCCTCCCCTCCTCCTCCTCCGCCGACACGCTGGCCGACGACGACCACAGGAGGAAGGACCATCCCAACTATTGGTAG
- Protein Sequence
- MRIVFFREPVPRSAHGAAVYDDKLWIFAGYDGNARLNDMWTINLVGDNHQWERVEQKGQCPPTCCNFPVAVARGKMFVFSGQSGAKITNALFQFDFETHTWSRVCTEHLLRCAGPAPARRYGHVMVSHGRHLYVFGGAADSTLPSDLHSFDLDTQMWSVVHPAHDSQVPVGRLFHAGAVVGDALYVFGGTVDNNVRSGELFCFQLSDYPRCTLHDDFGRILKSQQFCDVVVLVGVEESCVLAHQALLAARSTYLRARIQEAREELSRRIDEGLEKPLEVYDYKAKPRLTLKLPEATPEAFDMVLNFIYTDRIDPSEKYEDPEKPSTILQVMEVLRLALRLNIPRLRGLCARFLKANLCYSNVLPALHSAHHAQVHSVKEYCLRFLVKDYNFTQIVMSPEFETMEKSLMVEMIRRRHRPQAKPPAPQESDEDIIGTTLEQDMSVFLGGAGAGLSDVRLRVGAAWRAAHRSILAARAAYFEAMFRSFCPTDNTVNIQICDTVPSEEAFDSLLRYIYYGDTNMPTEDSLYLFQAPIYYGFTNNRLQVFCKHNLQSNVTPDNVLAILQAADRMRAADIKEYALKMIVHNFYQLAHQESIKTLPQPLLVDIVVALATARRADSPLPAQPRSLPSSSSADTLADDDHRRKDHPNYW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00871420;
- 90% Identity
- iTF_00871420;
- 80% Identity
- -