Cfag008053.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cydia fagiglandana
Gene Symbol
USP
Assembly
GCA_963556715.1
Location
OY750794.1:8853294-8891275[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2.6e-12 1.6e-08 35.4 0.5 211 264 251 304 245 307 0.94
2 4 9.7e-10 6e-06 27.0 0.7 222 264 306 348 303 352 0.92
3 4 1.3e-09 8.3e-06 26.5 0.6 222 263 350 391 346 393 0.93
4 4 3e-24 1.8e-20 74.8 0.4 236 394 392 562 390 575 0.80

Sequence Information

Coding Sequence
ATGTCAAGTGTTGCGAAGAAAGACAAGCCGACGATGTCGGTGACGGCGCTGATGAACAACTGGGtgcggccggcgccgccgcaGCCGCAGTCGGCGGCGCCCGCGCCCGTCTCCATGCTGCAGCCGCTGCAGATGCCGTCGCCCTCGATGCAGAACACCCACCACATCCCGACGGTGGACTGCTCGCTCGACATGCAATGGCTTAACCTGGAGAGTGGGTTCATGTCGCCCATGTCCCCCCCGGAGATGAAGCCCGACACAGCCATGCTGGACGGGCTCCGGGACGACGCGACCTCGCCCCCCACCTTCAAGAACTACCCCCCCAACCACCCGCTCAGCGGCTCCAAGCACCTGTGCTCGATATGCGGCGATAGGGCGTCGGGGAAACACTATGGAGTGTACAGTTGCGAAGGATGCAAAGGCTTCTTCAAGCGGACCGTGCGCAAAGACCTCTCGTACGCGTGCCGCGAGGAGCGGAACTGCATCATCGACAAGCGGCAGCGGAACCGATGCCAGTACTGTCGCTACCAGAAGTGTCTGGCGTGCGGCATGAAGCGCGAGGCCGTGCAGGAGGAGCGGCAGCGCGCCGCGCGCGGCGCCGAGGACGCGCACCCGAGCAGCTCGGTGCAGGAGCTGTCCATCGAGCGGCTTCTGGAGATGGAGTCTCTGGTGGCGGACCCCAGCGAGGAGTACCAGTTCCTGCGCGTCGGCTCCGACACCAACGTGCCGCCGCGGTACCGAGTGCCCGTCTCCAGCCTCTGCCAGATAGGCAACAAGCAGATAGCGGCGCTGGTGGTGTGGGCGCGCGACATCCCGCACTTCGGGCAGCTGGTGCTGGAGGACCAGGTGGCGCTGATCAAGGCCTCCTGGAACGAGCTGCTGCTCTTCTCCATCGCCTGGCGCTCCATGGAGATAGCGGCGCTGGTGGTGTGGGCGCGCGACATCCCGCACTTCGGGCAGCTGGTGCTGGAGGACCAGGTGGCGCTCATCAAGGCCTCCTGGAACGAGCTGCTGCTCTTTTCCATCGCTTGGCGCTCCATGGAGATAGCGGCGCTGGTGGTGTGGGCGCGCGACATCCCGCACTTCGGGCAGCTGGTGCTGGAGGACCAGGTGGCGCTCATCAAGGCCTCCTGGAACGAGCTGCTGCTCTTTTCCATCGCTTGGCGCTCCATGGAGCTGGTGCTGGAGGACCAGGTAGCGCTGATCAAGGCCTCCTGGAACGAGCTGCTGCTCTTCTCCTTCGCCTGGCGCTCCATGGAGTACCTGGAGGACGAGCGGGAGAACGGGGACGGCACGCGGAGCACCACGCAGCCGCAGCTCATGTGCCTCATGCCGGGCATGACGCTGCACCGCAACTCGGCGCAGCAGGCGGGCGTGGGGCCGATCTTCGACCGCGTGCTGTCCGAGCTGAGCCTCAAGATGCGCTCGCTGCGCATGGACCAGGCCGAGTACGTCGCGCTCAAGGCCATCGTGCTGCTCAACCCAGATGTGAAAGGGTTGAAAAGCCGACAGGATGTTGACAATTTACGAGAAAAAATGTTCTCGTGCCTGGACGAGTACTgccggcgcgcgcgcggcggcgagGAGGGGCGGTTCGCGGCTCTGCTGCTGCGGCTGCCCGCGCTGCGCTCCATCTCGCTCAAGAGCTTCGAGCACCTCTACTTCTTCCACCTCGTGGCCGACGCCAGCATCGCCGGCTACATCCGCGAGGCGCTGCGCCACCACGCGCCGCCCATAGACGCCAACTCCATCATGTAA
Protein Sequence
MSSVAKKDKPTMSVTALMNNWVRPAPPQPQSAAPAPVSMLQPLQMPSPSMQNTHHIPTVDCSLDMQWLNLESGFMSPMSPPEMKPDTAMLDGLRDDATSPPTFKNYPPNHPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREERNCIIDKRQRNRCQYCRYQKCLACGMKREAVQEERQRAARGAEDAHPSSSVQELSIERLLEMESLVADPSEEYQFLRVGSDTNVPPRYRVPVSSLCQIGNKQIAALVVWARDIPHFGQLVLEDQVALIKASWNELLLFSIAWRSMEIAALVVWARDIPHFGQLVLEDQVALIKASWNELLLFSIAWRSMEIAALVVWARDIPHFGQLVLEDQVALIKASWNELLLFSIAWRSMELVLEDQVALIKASWNELLLFSFAWRSMEYLEDERENGDGTRSTTQPQLMCLMPGMTLHRNSAQQAGVGPIFDRVLSELSLKMRSLRMDQAEYVALKAIVLLNPDVKGLKSRQDVDNLREKMFSCLDEYCRRARGGEEGRFAALLLRLPALRSISLKSFEHLYFFHLVADASIAGYIREALRHHAPPIDANSIM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00410408; iTF_00410331; iTF_00410335;
90% Identity
iTF_00410408; iTF_00410331; iTF_00410335;
80% Identity
iTF_00410408; iTF_00410331; iTF_00410335;