Cfag000390.1
Basic Information
- Insect
- Cydia fagiglandana
- Gene Symbol
- Jarid2_1
- Assembly
- GCA_963556715.1
- Location
- OY750790.1:4626600-4653699[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-17 3.4e-14 54.0 0.0 7 88 362 440 358 441 0.89
Sequence Information
- Coding Sequence
- ATGAATTCTAAAAATCCATCAGAAGAATTAAATGTTTCTGATAATGAGGTTACAGGTATTGAGGTCCAAGCGAAAaagaaccaaattaaaaacaaagctAAGAAAGATGAAAAAGGGGAACAGAACCATGAAAGGGATAAAGAAGCCAAGAAAGCGGGGCAGAAAGATGAGAGAGGCAAAGAAGACAAGAAAGTGGAGCAAAAAAATGAGAGAGATAAAATAGACAAGAAAGCGGGGGAGAAAACTGAGAAGGAAAAAGAAGACATCAGTAAATTAGACGATAAAACAAAGAGGATTAAAGGAAAGGGAGTGGGCAAGAAAACTGTGCAGAAAGAGACGAGGGGAAGaaAACCGAAAGCCGCTCCGGTCAAAGAGAAGAAAACGTTACCGAAGCGAGCGACCAACGCCGCCCCTCCACAAGGAGATGTGGCCACCAACACAAGACTTCTAAGGAACTCCCGCGAACCGCCGCCAGCAAACCCGGACGTTTACGAGTTCGACGAACTCGAAGCCTCTCGGCCTCCCTCTGGCCTCCGTCGCCGCAACCAGGCCACTCCCGAGCCCCCCGCGCAGAGCCCTGAAAGCATACAATACATGGACATATGCCCTACAAGCTCACAACTAGtcaaaattaatactaaaaaaGAAGAAGTTGGGAACGTACTTAGTGTTAGTTTAGTGCCTAAGGACGATATATATAAGAAGCAGAAGAATTTAATAGATAATCTGACTAATAGTCCAGCGCTGCTGAATAAGTTTTTTAACTGCTTGCCGACGGAACTACAGAATGAGCTTGGGAGCTTGGCCACGGAGGGGAATGGGCGGGAAGAAGCTTATTTGGAAGAAAAGGCGAGGACGGTCTTAGAGGCACCCACGTATTATCCTACGGCTGAAGAGTTTGAGGACCCGATAAAGTACTATGACAAAATCGCCCCCGAGGCCTCAAAATACGGCCTCTGCAAAATAGTTCCCCCGGAAAACTTCAAACCTAAATGCACCATGAGCGACACAATCCGCTTCGCCGTCATATACCAGTACATATCCAAGATGTACAGCCGCTGGGGGCCCGTGTCCAGGGAGCTGGCTGCTATCAAGGCGCACTTGCGCACCCAGAGCGTCGTGTTCGCGCGGTCTCCCCTCTTGGACGGCAGCGAAGTGAACCTCCCCAAGCTATACCACGCCGTCGAGCGTAACGGCGGCCTCAGCAACGTAATACAACGCAAGCGCTGGGGCCGCGTCGCCGACGAGATGAAGCTGACCAAGCTGCAGCACCCCGAGCGCAAGCTGGACCCCATATACATGCGATACCTGCTGCCCTACGCCACGCTGTCTGACCAGGAACGCCAAAATATAATGGCGGAGGTGGAAAAATGCTGGACAACCAAGTACCAGAAGATGCTGGAACGGGCCCGCAATCCCTTCCAGCGCCAGTACCGCATGCTGGGCACCGAGTGCGAGTCCGAATCTGACGATGAAGGGGAAGATGGCAACACAGCCGGCGCGCTACATGAGGCAGAGGACTGTATAGTGCAAGGGCGGACCATGAACCTTGTCACATTCAAGAAGATCGCGACGTCCCTCATGGACGCACACTTCGAGCCGTCGAAGCAGCCGCCGGGCGCCGTCGACGTCGAGAAGGCGTACTGGCGCGCCGTGCTGCTGGGCACCGAGCACATCGTGGCCAACACGGCGTCCATAGACACAGGAGAGGAGGGTTATGGGTTCCCGAAGGACCCGCAGGCCGAGTACGGCGCGCACCCCTGGAATCTCAAGGTTGGTTAA
- Protein Sequence
- MNSKNPSEELNVSDNEVTGIEVQAKKNQIKNKAKKDEKGEQNHERDKEAKKAGQKDERGKEDKKVEQKNERDKIDKKAGEKTEKEKEDISKLDDKTKRIKGKGVGKKTVQKETRGRKPKAAPVKEKKTLPKRATNAAPPQGDVATNTRLLRNSREPPPANPDVYEFDELEASRPPSGLRRRNQATPEPPAQSPESIQYMDICPTSSQLVKINTKKEEVGNVLSVSLVPKDDIYKKQKNLIDNLTNSPALLNKFFNCLPTELQNELGSLATEGNGREEAYLEEKARTVLEAPTYYPTAEEFEDPIKYYDKIAPEASKYGLCKIVPPENFKPKCTMSDTIRFAVIYQYISKMYSRWGPVSRELAAIKAHLRTQSVVFARSPLLDGSEVNLPKLYHAVERNGGLSNVIQRKRWGRVADEMKLTKLQHPERKLDPIYMRYLLPYATLSDQERQNIMAEVEKCWTTKYQKMLERARNPFQRQYRMLGTECESESDDEGEDGNTAGALHEAEDCIVQGRTMNLVTFKKIATSLMDAHFEPSKQPPGAVDVEKAYWRAVLLGTEHIVANTASIDTGEEGYGFPKDPQAEYGAHPWNLKVG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00411200;
- 90% Identity
- -
- 80% Identity
- -