Basic Information

Insect: Cydia amplana
Gene Symbol: Znf574
Assembly: GCA_948474715.1
Location: OX419671.1:16044170-16055305[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 3.4 1.9e+02 3.3 0.3 1 23 184 206 184 206 0.94

2 26 2.6 1.4e+02 3.7 1.7 1 23 250 272 250 272 0.88

3 26 4.3 2.3e+02 3.0 0.1 3 23 312 333 310 333 0.93

4 26 1.9e-07 1e-05 26.1 0.3 2 23 358 379 357 379 0.97

5 26 2.3 1.3e+02 3.8 0.0 2 23 387 409 386 409 0.94

6 26 0.073 4 8.6 0.0 1 23 415 437 415 437 0.88

7 26 0.033 1.8 9.7 0.4 1 23 443 467 443 467 0.93

8 26 0.0015 0.084 13.8 7.0 5 23 476 494 475 494 0.97

9 26 0.089 4.8 8.3 2.3 1 23 622 644 622 644 0.96

10 26 0.00035 0.019 15.9 1.5 2 23 651 673 650 673 0.92

11 26 8.9e-07 4.8e-05 24.0 3.9 1 23 679 701 679 701 0.97

12 26 5.3e-06 0.00029 21.6 2.3 1 23 707 729 707 729 0.98

13 26 0.002 0.11 13.5 0.4 1 23 735 757 735 757 0.98

14 26 5.5e-05 0.003 18.4 0.1 1 23 763 785 763 785 0.94

15 26 0.74 40 5.4 6.8 1 23 791 814 791 814 0.96

16 26 3.4 1.8e+02 3.3 0.2 3 23 860 880 859 880 0.83

17 26 6.8e-05 0.0037 18.1 4.5 1 23 886 908 886 908 0.98

18 26 0.0064 0.35 11.9 0.0 1 23 914 936 914 936 0.98

19 26 0.00056 0.03 15.2 0.8 1 23 941 963 941 963 0.95

20 26 0.0013 0.073 14.0 2.1 6 23 973 990 971 990 0.97

21 26 0.002 0.11 13.5 2.0 2 23 1191 1213 1191 1213 0.96

22 26 0.0038 0.21 12.6 0.3 1 23 1219 1241 1219 1241 0.93

23 26 0.00086 0.046 14.6 0.5 2 23 1248 1269 1247 1269 0.96

24 26 0.00072 0.039 14.9 0.4 1 23 1277 1299 1277 1299 0.97

25 26 0.0017 0.095 13.7 0.5 5 23 1308 1326 1305 1326 0.96

26 26 1.7 90 4.3 2.5 1 23 1331 1356 1331 1356 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	3.4	1.9e+02	3.3	0.3	1	23	184	206	184	206	0.94
2	26	2.6	1.4e+02	3.7	1.7	1	23	250	272	250	272	0.88
3	26	4.3	2.3e+02	3.0	0.1	3	23	312	333	310	333	0.93
4	26	1.9e-07	1e-05	26.1	0.3	2	23	358	379	357	379	0.97
5	26	2.3	1.3e+02	3.8	0.0	2	23	387	409	386	409	0.94
6	26	0.073	4	8.6	0.0	1	23	415	437	415	437	0.88
7	26	0.033	1.8	9.7	0.4	1	23	443	467	443	467	0.93
8	26	0.0015	0.084	13.8	7.0	5	23	476	494	475	494	0.97
9	26	0.089	4.8	8.3	2.3	1	23	622	644	622	644	0.96
10	26	0.00035	0.019	15.9	1.5	2	23	651	673	650	673	0.92
11	26	8.9e-07	4.8e-05	24.0	3.9	1	23	679	701	679	701	0.97
12	26	5.3e-06	0.00029	21.6	2.3	1	23	707	729	707	729	0.98
13	26	0.002	0.11	13.5	0.4	1	23	735	757	735	757	0.98
14	26	5.5e-05	0.003	18.4	0.1	1	23	763	785	763	785	0.94
15	26	0.74	40	5.4	6.8	1	23	791	814	791	814	0.96
16	26	3.4	1.8e+02	3.3	0.2	3	23	860	880	859	880	0.83
17	26	6.8e-05	0.0037	18.1	4.5	1	23	886	908	886	908	0.98
18	26	0.0064	0.35	11.9	0.0	1	23	914	936	914	936	0.98
19	26	0.00056	0.03	15.2	0.8	1	23	941	963	941	963	0.95
20	26	0.0013	0.073	14.0	2.1	6	23	973	990	971	990	0.97
21	26	0.002	0.11	13.5	2.0	2	23	1191	1213	1191	1213	0.96
22	26	0.0038	0.21	12.6	0.3	1	23	1219	1241	1219	1241	0.93
23	26	0.00086	0.046	14.6	0.5	2	23	1248	1269	1247	1269	0.96
24	26	0.00072	0.039	14.9	0.4	1	23	1277	1299	1277	1299	0.97
25	26	0.0017	0.095	13.7	0.5	5	23	1308	1326	1305	1326	0.96
26	26	1.7	90	4.3	2.5	1	23	1331	1356	1331	1356	0.93

Sequence Information

Coding Sequence: ATGAGTACCGGGACTGAACAGATATTTCTGCCTGATTCCGCGAGCAACTTACCTCACGGAGTCGAAATGATAAGGTCGATGAGGCCGGGTAATGGAGCGCCGACAATCAACACAACCAATCTTGAGAATGTGTCGGACTTCTCAAAGGTGTGTCGTGTGTGTGCAACTGTCACAGAGCTGGTGGTTCCCATCTATGGTGAAGAGGGCCTGCGCATGAACCTTGCTGGTAAAATAAAGAGACATCTGCCTATCAAGGTAACGGAGAATGATGTGCTGCCCCTGGTGGTGTGCTTCCAATGCACCAGCACCCTCCTGGCGACGCACGAGCTGGTGGCGTGCAGCCTGCAGGCCGACGCGGCGCTGCGCACGGCGCGCGCGCAGCGAGAGCGGCAGGCGCAGCAGTCTCAGCAGCGTCAGGAGCAGGCGCTGGACACAGAGGGCATTGTCGAAGACCGGCCAGACGAGGACGTAAAATTTAAAGCGGTAGTTAAGAGCGTGCTCGTCAACTATTTCCACACCCTTAACATGGACGAAGGCGACGAGTGCCAGTTCGCCTGCCAGAAATGCTCGTGGAGAGGCGATTCCACAGAACTACTTGTAGACCATTTACACGCGCACCAAGCTAAACCCGATACCGTTGACAGCTTCATACGACAGTACATAACTTTTGAGGAACCGCTAGAGTCAGATGATGATACAACAGAAGCGCCAACAATCAAACTTAAGCCTCCGAAGCCTGTAGCAGCTCACTGCTGTCCGTTCTGCGACAGTATATTCTCATCTACATCGCGTTTAGGACTTCACGCCGCCGAGCATGTTGAAATCAGCGAAGACATCGCTGTGGAGTGCTGCGGAGCGCTCTACAGCGAGCGTTCTTTATTCATCCAACACGCCCTTGCCAAGCACGAACGCGCTCCGCCCCCCGGTATAATCTGCCGCGCTTGTGGCCAAAAAGCTGAATCCCTCGTTACTCTCTCCGAACATATAAGAAACACACACGCTGATGATGCTATCACTAGAAAAAGAACAGACCGCAATCCTAAAAGCAAAGACCAGAAATACATCCCGACTCCATGCCCTGATTGTGGCAAGACGTTCTCGAACAAGTACAACATGGCTGTACATTTGCGATCGCATAAAGAAACGCCAGAAAAAGTCCAATGTGAGTTGTGCAGTAAATGGTACGGCAGTCGCGGCGCCTTGGTCAGTCATGTGAAGCTAGCTCATGGTGGGTTACTCCGCTTCGCTTGTGACATATGCGGGGAAAGGTTCCCGAATCGCACCGTCCGTGCCGTCCATGTCGCCTCACACACGGGGGAGAGACCGCACGTCTGTACAGTCGAGGGCTGTTCAAGTGCATTCAGGAGTCGCGACTCGTTGTTAAAACATTTGGATGCGCACAGAAATGAGCGGACCTACGCCTGCCATTGTGGGAAGGATTTCAAGAGGAGATGGCATTTAAAAAGACATCTGAAAACACATCAAGAAAGCGGTCTATTGAAGAAGAAGGAGGAATCTTGGGCGGGAATTACGGAAGACGGTCACGACCCCGGTGTCAATGGCGAGGCTGACGGTGACCGAGCCTCGAGCGACGAGGACGACCGCCCGCTCGCCACCCTAGCCTCCGAGAAAGCTGACGCGTACACAAACTTCTACAACGCCTTGCTAAACTTTAGAAACCATTTCCTAAACGGACACGACGCCCGCTACCCAGAGTTTACGGAGTCGAGCGAAAGCGAAGCGGCTAACGGATCGGACGACTACGACGACTTGTCCAAGAATAACATGCGACGGGATCGCATGGACGAAGCCACGAGACTCGAGCTAGCGAGCGCGCAGACGCGCATAGACGGCAAGACCTACTACACGTGTCGCGTGTGCGGCAAACGTCTCAGCTCCCCGCACACTTACGTGTTCCACACGCGAATACACACGGGCGAGCGGCCGTGCGTGTGCCACATATGCGGGAAGCAGTTCCGAGCGCCGAACGGCTTACGGCGACATCTGGCGGAGACCCACGAGCGGCGCCGCCGGCACGCGTGTCCACACTGCGGCCGCACGTTCGCCAACTCGCAGAACCTGAAGCAGCACACGAGGACGCACACGGGGGAGAGGCCGTACCCGTGCTCGCTCTGCGGGAAACGCTTCCGGCAGTCGGGGTCGCTGCACGCGCACAAGAAAACCCACGTCGCGCTGTTGCCGTTCCGCTGCGCGCACTGCCCGGCCGCGTTCCGGCTGCGCGCGGGGCTGGCGCGGCACCGGCTGCGGCACTCCGGGGAGCGTCCGCACCCGTGCGAGGTGTGCGGGCGGGCGTTCCGGACGCGCGCGGACCTGGCGGCGCACCGCGCGGCGCACTCGCCGGCGCGCGCGCACCACTGCGGCGTGTGTCACGCCGCGCTGCGCTCGCGCCGCGCGCTGCGACACCACACGAGGCGGCTGCACCCGCCGCCGCCGCCGCAGATACAGGACGATATGGCGAATCGATCCTACTTCGTCCTAGCGCCATTAGACGCGCCGCAAAAAGTCGAAAACTCTCAAACGGAGAACTCGGCGGTCGCCACGCGGCGGCGGCGGCACTGCTCCGCCTGCGGGCTCCGCGTCGCCGCCGGCAACCTCGCCAGGCACGTACGCACCGCGCACGCGCAAACACGTCCGCACACATGCCAACAATGCCCAGCCACCTTCTCCAGACGAGACCATCTCAAAGACCACGAGCGCACACATGGGAGTACCCGCGAATATGTCTGCGACACTTGCGGGGCCGCGTCGCGGTCGGCGGCGGCGTTACGCATGCACAAGCAGAGCCACCGCCATCGACTGCACGCCTGCCTGCACTGCGACGCGCGGTTCCGTCGCAAGGCGGAGCTGGCCGCGCATGTGTCGGTGCACACCGGGGAACGCGCGCATGTGTGTCGGTGCGGCAAGACCTTCCGCCTGCGCGCGCAGCTGACGCGCCACGAGCGCACGCACCGGGACCCGCCGCGCTACCGGCGCTGCGAGTTCTGCCCGGGCGTGGTGCGCGGCGCCCTGTACACCGGCCACCTGGTGCGCCGCCACGCCGACCTGCTGTTCCACTGCGACGAGTGCAACTCGTACGTCGCGCGCAGGCAGTTCCTCGCGCACATGACCCGCCACGCGCACCAGTACGACGCGGAAGGGCGCCGCGCGGCCCCCAAGCCCCTCGACGTGCCGCCCGCCCCCGCCCCCGCGCCCGCCCCCGCCCCCGCCCCCGCCCCCGCGCCCTGCACCACCTCCGCGGCCGCCGACTCCACCACCGCCTCCTCCGAGCCGCGCTCCGACCCCGACACCGACGACGAGCGAGACGACACGCCACCGCCGGAACCGGAGCCCAGCGACCGAGGTGGCAACCCTGACCTAAACCCCGACCCGGCGCGGCTGAATGTAGCGCCCGGGCCGAGCGCGGCGGCTCAACCGATCGCGATAGCTCAGCCGAACCCTGAACCCGTTCAATCGAGATCTGTGTCCGTTGATGATCCGCTAAATCGGCCGGAGTCGAACGCGCAAGTTGAAGAAACAAAGCCTAAGCCCGAGAAGGCGCCGGTCGTCCGCCAGTGCCCGCACTGCCCCAAGACCTACACGGCCTCCTCGAGCTACTTCTACCATCTCAAGTACACGCACGGCGGGAGCCGCGAGCACGAGTGCCCCGCCTGCGGCCGCCGCTTCGGCACCCGCGGCGCGCTGCGCGAGCACTCCTCCCTGCACGAGCCGACGCGGCGCCTGCAGTGCGAGCAGTGCGGGAAACGGTTCCGGACCAAAGCGGGCCAGTATATACACGCGCAGACGCATAGAGATAAGAGAGAGAAGAAATTTGAATGCGCCGAATGCGGCCGAGCGTTCCGCTGGCGCACGGAGCTCAAGCGCCACGTGACTAGACACGCCGCGGCCCGGACGCACGCGTGCGAGTGTGGGCGCGCCTTTTCCGTGCGCGCCGATCTGTTAAGACATGCTCGCACGCACAGCCGCGCGGCGCATGTGTGCCCGCACGCGGGGTGCTGCGCCACGTTCGCGCAGCCGCGCTACCTGCGCGCGCACGTGACGCGCAAGCACGCCCCCGCGCCCGACAAGGCGCAGGCGCAGCGCAAGTCTGCGTAA
Protein Sequence: MSTGTEQIFLPDSASNLPHGVEMIRSMRPGNGAPTINTTNLENVSDFSKVCRVCATVTELVVPIYGEEGLRMNLAGKIKRHLPIKVTENDVLPLVVCFQCTSTLLATHELVACSLQADAALRTARAQRERQAQQSQQRQEQALDTEGIVEDRPDEDVKFKAVVKSVLVNYFHTLNMDEGDECQFACQKCSWRGDSTELLVDHLHAHQAKPDTVDSFIRQYITFEEPLESDDDTTEAPTIKLKPPKPVAAHCCPFCDSIFSSTSRLGLHAAEHVEISEDIAVECCGALYSERSLFIQHALAKHERAPPPGIICRACGQKAESLVTLSEHIRNTHADDAITRKRTDRNPKSKDQKYIPTPCPDCGKTFSNKYNMAVHLRSHKETPEKVQCELCSKWYGSRGALVSHVKLAHGGLLRFACDICGERFPNRTVRAVHVASHTGERPHVCTVEGCSSAFRSRDSLLKHLDAHRNERTYACHCGKDFKRRWHLKRHLKTHQESGLLKKKEESWAGITEDGHDPGVNGEADGDRASSDEDDRPLATLASEKADAYTNFYNALLNFRNHFLNGHDARYPEFTESSESEAANGSDDYDDLSKNNMRRDRMDEATRLELASAQTRIDGKTYYTCRVCGKRLSSPHTYVFHTRIHTGERPCVCHICGKQFRAPNGLRRHLAETHERRRRHACPHCGRTFANSQNLKQHTRTHTGERPYPCSLCGKRFRQSGSLHAHKKTHVALLPFRCAHCPAAFRLRAGLARHRLRHSGERPHPCEVCGRAFRTRADLAAHRAAHSPARAHHCGVCHAALRSRRALRHHTRRLHPPPPPQIQDDMANRSYFVLAPLDAPQKVENSQTENSAVATRRRRHCSACGLRVAAGNLARHVRTAHAQTRPHTCQQCPATFSRRDHLKDHERTHGSTREYVCDTCGAASRSAAALRMHKQSHRHRLHACLHCDARFRRKAELAAHVSVHTGERAHVCRCGKTFRLRAQLTRHERTHRDPPRYRRCEFCPGVVRGALYTGHLVRRHADLLFHCDECNSYVARRQFLAHMTRHAHQYDAEGRRAAPKPLDVPPAPAPAPAPAPAPAPAPCTTSAAADSTTASSEPRSDPDTDDERDDTPPPEPEPSDRGGNPDLNPDPARLNVAPGPSAAAQPIAIAQPNPEPVQSRSVSVDDPLNRPESNAQVEETKPKPEKAPVVRQCPHCPKTYTASSSYFYHLKYTHGGSREHECPACGRRFGTRGALREHSSLHEPTRRLQCEQCGKRFRTKAGQYIHAQTHRDKREKKFECAECGRAFRWRTELKRHVTRHAAARTHACECGRAFSVRADLLRHARTHSRAAHVCPHAGCCATFAQPRYLRAHVTRKHAPAPDKAQAQRKSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00410544;
90% Identity: -
80% Identity: -