Basic Information

Transcription Factor Domain

TF Family: DM
Domain: DM domain
PFAM: PF00751
TF Group: Zinc-Coordinating Group
Description: The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 2.4e-25 1.5e-21 76.4 10.8 1 47 8 54 8 54 0.98

2 6 3.8e-09 2.4e-05 24.6 2.2 28 47 61 80 57 80 0.93

3 6 8.4e-13 5.3e-09 36.3 0.7 14 47 88 122 84 122 0.90

4 6 5.4e-12 3.4e-08 33.7 0.4 14 47 130 164 126 164 0.90

5 6 4.8e-17 3e-13 49.9 1.6 14 47 172 205 168 205 0.94

6 6 0.74 4.7e+03 -2.0 0.0 15 22 214 221 212 224 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	2.4e-25	1.5e-21	76.4	10.8	1	47	8	54	8	54	0.98
2	6	3.8e-09	2.4e-05	24.6	2.2	28	47	61	80	57	80	0.93
3	6	8.4e-13	5.3e-09	36.3	0.7	14	47	88	122	84	122	0.90
4	6	5.4e-12	3.4e-08	33.7	0.4	14	47	130	164	126	164	0.90
5	6	4.8e-17	3e-13	49.9	1.6	14	47	172	205	168	205	0.94
6	6	0.74	4.7e+03	-2.0	0.0	15	22	214	221	212	224	0.80

Coding Sequence: ATGCTAAGCGGCGGACGGGCGAGAGTGCCAAAATGTGCCCGGTGCCGCAACCACGGGCTCATCTCCAGCCTTCGTGGACACAAGAAGGCTTGCCGCTACCGCACCTGCCAATGCCCGAAATGCGGGCTCATAAAGGAGCGGCAGCGTATCATGGCGGCTCAGGCTCGTCGCTACAGCACCAGCTGCCAGTGCTCAAAATGCGGGCTCATAAAGGAGCGGCAGCGTATCATGGCGGCTCAGGTAAAGTACCGCAACGGACCAATATCAAGCCTTAGTGGACACAAGAAGGCTCGTCGCTACAGCACTAGCTGCCAGTGCTCAAAATGCGGGCTCATAAAGGAGCGGCAGCGTATCATGGCGGCTCAGGTAAAGTACCGCAACGGACCAATATCAAGCCTTAGTGGACACAAGAAGGCTCGTCGCTACAGCATTAGCTGCCAGTGCTCAAAATGCGGGCTCATAAAGGAGCGGCAGCGTATCATGGCGCCTCAGGTAAAGTACCGCAACGGACCAATATCAAGCCTTAGTGGACACAAGAAGGCTTGCCGCTACCGCACCTGCCAATGCCCGAAATGCGGGCTCATAAAAGAGCGGCAGAGTATCATGGCGGCTCAGGTAAAGTACCGCAACGAACCAATATCAAGCCTTAGTGGACACAAGAAGGCTCGTCGCTCGCTACCGCACCTGCCAGTGCCCCAAATGCGGGCTCATAAAGGAGCGGCAGCGTATCATGGCGGCTCAGGGCCCGGCCACATGTCAGCGGTGCGACGCCGCCGCCGCTGCGCGGCGTCGCCCGCCGCACGCAAAACTTTGCGGTGCCGAGCGGCGTGCGGCGACGCGTGCGATGCCGCGCTGCATAGTAAAATATAA
Protein Sequence: MLSGGRARVPKCARCRNHGLISSLRGHKKACRYRTCQCPKCGLIKERQRIMAAQARRYSTSCQCSKCGLIKERQRIMAAQVKYRNGPISSLSGHKKARRYSTSCQCSKCGLIKERQRIMAAQVKYRNGPISSLSGHKKARRYSISCQCSKCGLIKERQRIMAPQVKYRNGPISSLSGHKKACRYRTCQCPKCGLIKERQSIMAAQVKYRNEPISSLSGHKKARRSLPHLPVPQMRAHKGAAAYHGGSGPGHMSAVRRRRRCAASPAARKTLRCRAACGDACDAALHSKI

Sequence clustering based on sequence similarity using MMseqs2