Basic Information

Insect: Cydalima perspectalis
Gene Symbol: Hr39
Assembly: GCA_951394215.1
Location: OX596201.1:15231469-15244195[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.43 2.8e+03 -2.1 1.2 76 139 100 177 41 227 0.41

2 4 4 2.6e+04 -6.7 10.1 83 184 231 331 140 366 0.54

3 4 1.3e-07 0.00083 19.4 0.1 1 20 445 464 445 470 0.91

4 4 1.4e-65 8.9e-62 210.3 0.0 158 408 504 763 476 763 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.43	2.8e+03	-2.1	1.2	76	139	100	177	41	227	0.41
2	4	4	2.6e+04	-6.7	10.1	83	184	231	331	140	366	0.54
3	4	1.3e-07	0.00083	19.4	0.1	1	20	445	464	445	470	0.91
4	4	1.4e-65	8.9e-62	210.3	0.0	158	408	504	763	476	763	0.84

Sequence Information

Coding Sequence: ATGAGCGCGATGACGAGTGAAGGCGACCCGGTGAAGGTGGAAGGGGTTCACGTCTCAGTTACCACTATCAGCATGTCCGGCCCGGAGACCAATAAcgtGAAATTCTCATACAGTTCGAGTGGAGTCCGGATCAGCGTGTCATCCGAGCCACACGATGAAGACTCCACAGACGCTGAAATTTCCAAAATTGACTTTACACAACATCAAAatgagGTGAATATGCGTAATAAGAAAAAACGCCCGTCGAGCGGGGCGCAGTGCGACTCGCAGGCGAGTGACCGCGAGCGGCCTATGTCATGGGAGGGGGAGCTGTCCGACTCCGAGATGGTCATAGACACCAGTGTCAATAATGACGAAAACAGCAGCTCCCTAGACCTGCAGTCGTCCCGTGACTCCATTGACACGCTCCGGAACGTGACCATCAAGACGGAGCCCATCAAGACCGAGGCCTTCCAGAGCCTGGACGACCAGCGGGTGCTGGACCTCAAGTACCCGGCGCCGTTGCAGCCCCACCAGAGGAGTCTTAGCATGAATAGGATATCAGTACTGACGGACAGCACGTCCCTCTCGCTAGTGCGGCGGCCCTCCTCGCCTACCAGCAGTGCCAAGTCTCTTGTGCTGGACCAGAGCTCGATGCCGCTCATGCCGCAGACTTCGCTGGGGGAAGTCCAGAACTTGACTATCAAGAAAGAGACGCAGTTGTCAGAGTTGAAATGCGAGCCGTCTGTAGGCACGGATAAGCTGTTAGGAGCCCTGCACGGATCTCCCCTGCTGGGGCGCCTGCCGAGGGTCCAGTCCAGTGCCAGCACCGACTCCGCCGTACATTCTATGTATACTCATAGCGTGTACAGCAGTCCGTCAGCGAGTCCGCGCGCGTCGCGTCACTACACGCCGTCGCTGTCGCGCAACAACAGCGACGCGTCGCACTCCTCCTGCTACTCGTACAGCTCAGAGTTCTCGCCCACGCACTCGCCCGTGCAGGGTCGACATCCCCACGTGGTGTACCGGGACGTGGCCGCGCCCGTGTTCCCGGCGTCGCCCGCGCACGACGAGGATGCGGAGACAGCTGACGATCGGCTGCACCACCACCAGGGCATCAGCCGGCAGCAGCTTATCAATAGCCCCTGCCCAATCTGCGGCGACAAGATCAGCGGCTTCCACTACGGCATCTTCTCGTGCGAGTCCTGCAAGGGCTTCTTCAAGCGCACCGTGCAGAACCGCAAGAACTACATGTGCTTGCGCGGCGGCAACTGTCCCGTGACGGTGGCTATGCGCAAGAAGTGTCCGGCGTGCCGCTTCGATAAGTGCCTGGGGTGCGGCATGAAGCTTGAAGCCATCCGCGAGGACCGGACGCGCGGCGGCCGCTCGACGTACCAGTGTTCGTACTCGCTGTCGGGCGCGGCGTCCACCGGCTCGCTGCTGTCCGCGCACGTGCCCACCACGCTGCGGCACGCCTCCAGCCTCACTTGTGTAAACGGCCCTGGGTCATACAACAGTAGAGGGGAATCAAGTAATAGTCGACTTACGCCTGACATACCACCGTTATTGCAGGAGATAATGGAAGTAGAACACCTATGGCAGTACAACGAGTCGGAGCTGAGCCGGCTGGGCAAGGCGCCGGGCAGCCCGTCCGCCAACCCGCTGCTGGCGGCCAGCGGCATCACCGCGCACAACTCCAGCCCCGACTTCCTGGCCGATCTGTGCAACATCGCCGACCATCGCTTGTACAAGATCGTTAAGTGGTGTAAGAGCTTGCCGCTCTTTAAGAATATTTCGATCGACGACCAGATCTGCCTGCTGATCAACAGCTGGTGCGAGCTGCTGGTGCTGTCCTGCTGCTACCGCGGCGTCAGCACCCCGGGCGAGGTGCGCGTCGGCGGCGGCCGCGGCATCACCCTCGACCAGAGCGCCAAgctGGGCTTGACGCCTTGTATAGAACGAATGCTCAGCTTCACGGACCACCTGAGAAGACTACGAGTAGACCGATACGAATATGTTGCACTGAAGGTCATCGTGCTTCTTACATCagATACCCCCGAACTCCGTGAGTCGGAGAAGGTGCGAGCGTCGCAAGAGAAGGCGCTGGCGGCGCTCCAGGCGTACACGGCGACGCACTCGCCCGACACGCCCGCCAAGTTCGGCGAGCTGCTGCTGCGCATACCGGAGCTGCAGCGGACTTGCCAGTTTTTCATGCAAGTCGGAAAAGAGATGCTCAACCCAGCGAACAAGAGTAAAGACGGAGAGGGGCCAAGCTTCAACCTCCTCATGGAACTCCTCCGAGGCGACCACTGA
Protein Sequence: MSAMTSEGDPVKVEGVHVSVTTISMSGPETNNVKFSYSSSGVRISVSSEPHDEDSTDAEISKIDFTQHQNEVNMRNKKKRPSSGAQCDSQASDRERPMSWEGELSDSEMVIDTSVNNDENSSSLDLQSSRDSIDTLRNVTIKTEPIKTEAFQSLDDQRVLDLKYPAPLQPHQRSLSMNRISVLTDSTSLSLVRRPSSPTSSAKSLVLDQSSMPLMPQTSLGEVQNLTIKKETQLSELKCEPSVGTDKLLGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHVVYRDVAAPVFPASPAHDEDAETADDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVAMRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYSLSGAASTGSLLSAHVPTTLRHASSLTCVNGPGSYNSRGESSNSRLTPDIPPLLQEIMEVEHLWQYNESELSRLGKAPGSPSANPLLAASGITAHNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLDQSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDTPELRESEKVRASQEKALAALQAYTATHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKSKDGEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961038;
90% Identity: iTF_00806824;
80% Identity: iTF_00408552;