Cper023627.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cydalima perspectalis
Gene Symbol
egg
Assembly
GCA_951394215.1
Location
OX596230.1:4637556-4660156[-]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2 1.5e+04 -3.8 0.0 17 28 355 366 353 388 0.58
2 2 1.3e-12 8.6e-09 35.4 0.0 4 75 420 484 417 486 0.88

Sequence Information

Coding Sequence
ATGCAACACGATTCAACGCCTTCTTCCTCGGTGGAGACTCGAGCCAAACGCCGCATGTCTTCGGCGCACGAGAGCGCAGCGAAGAGGCCCGCCATACCGCTGGGGTACGCGCCGCTCGACTCGGACCGGTCCTCACATCAGGAACTGTTCTACTCCGGTGAGAACTCGAAAGCCGATGATGACAAAGACATCGCCGTGTTGAAAGTGAGCGCGGAGTCCGCCCCCCAAGACCTCCCCCCGCCGGGCGAGCTGGCGCGGCCCCCCCTGCGCGCGGACCAGTGCGTGTACGCGATGCGCAACTCGTTCGGCTCCTGGTCGCGCGCCAAGATACTGGACGTGCAGGGGAAGGGGCAGGTGgttGGCCACGCCTTCACCGTTTGCCGTGTGAAGCTGTTCTCCAAGAACCAGACCAAGACGAAGCTGATCACAGCGCGCTGCATTGCTTACGCCGAGCCTGCGGAGGTCAGGATGACTATAGGTACCAGAGTGATCGCCCTGTTCAGGGACCCGATGAACACGGCGAAGAGAGACACCTTCTACTCAGGGATCGTGGCTGAAGTGCCCAACCCAGTCAACAGTTACAGATACCTGGTGTTCTTCGACGACGGCTACGTCCAGTACGTCCGTCACCGCGACACGCGCGTCGTGTGCGAGTGCTCGCCGCTCGTGTGGGAGGAGGTGCACCCGCACTCGCGCGAGTTCGTGCGCACGTACCTGGTCGCGTACCCCGAGCGGCCCATGGTGCGCCTGCACGCCGGACAGAGCCTCAAGACCGAGTGGAGCGGAAAATGGTGGGCGTCCAAGGTGGTCCAGGTGGACGCGTCTCTCGTCCAGGTCCAATTTGCTGAAGATGACCGCACCGAGTGGATCTACCGCGGCTCCACGCGGCTGGCGCCGCTGTACCACGAGCTGCAGGCCGCCGAGAGGCACCGCACCCGCCCCATGCCGAGGACCAAGGCGCAGCCCAGGTTTAACATGCCCTACGTGGAGTACACGCGCTCGGACGAGCAGAACAGGTCGGAGCATCCGGTGATGTCGTCTCGAATCGTCAGCGCCCATGAGAGGGAGATCCGTCAGCGTGCAGTGGCGAAGAAGTCGACGGCGATGCCGCCTGCGCCCACGCAGGATGAGAACGACATTAGTCGCGTTGTGTTCTACACGCCGAGGAACACGGTCAGACCGCACAAGTTCGTCCCCCACGCGTGCAGCGAGGCGTGCAAGCGCGACGACACGCTCGCGCTGAAGGACCTCAGGACGTACAACCCGCTCGCCAAGCCGCTCCTCAGCGGCTGGGAGAGACAAATAGTCCGCTTCAACGGCATCAAGCAAGTGATGTACCGCGCGCcgtgcgggcggcgcgtgcgcaacaTATGGGAGCTGCACCGGTACCTGCGCCTGGCGCACTCCGACATGCCCGTCGACCTGTTCGACTTCAGCGCGCACACGCACTGCCTCTCCGAGTTCGTGATCAACTCGCACTACGTCTGGAAGAAGGACCTCTCCCACGGCAAGGAGAACGTGCCAGTTCCCTGCGTGAACTACTTCGACGACTCGCTGCCGGAGTTCTGCTCGTACAACACCGAGCGGACCCCCACGGCGGGGGTGCCGCTCAACCTGGACCCCGAGTTCCTGTGCGGCTGCGACTGCACTGACGACTGCGAGGATAAGACCAAGTGCGCCTGCTGGAAGATGACGCTAGAGGGCGCGCGCACAATAGGGCTGCGCGGCAACAACGTCGGCTACGTGTACAAGCGCCTGCCCGACCCGCTGCCCTCCGGCATCTACGAGTGCAACTCCAGATGCAAATGCAAGAACACGTGTCTCAACAGAGTGGCCCAGCATCCCTTGCAGCTCAAGTTACAGGTATTCAAGACACGGAACCGCGGGTGGGGCATCAGGACCCTGAACGACGTGCCGAAAGGCGCATTCCTGTGCGTGTACGCAGGAAATCTGCTCACAGACGCCACGGCTACCATGGACGGTCTGAACGAGGGTGACGAGTACCTGGCCGAGCTGGACTACATCGAGGTGGTGGAGCAGATGAAGGAGGGCTACGAGGAGGACGTGCCTGACGCCGACAAGCGCCTCGACAAGAAAAACATCGGCAAACCCGAAGAGTCGGCGACCTCCAGCTCTGAGGAAGAGGAGCAGCCCTCCAAGAACGAGAAAGAAGATGGCGACTTCTGCCCCGGGTACATCGGCATGGGCGTCACCGAGTTCAGCAAACGGCTCCGGAAACGCGACAAGAACAAGAAAGAGAAGGCGGAATCGGCGAAAGAGAAGAAAGATAAGGTCGCGCCGAAAGAGAAGCCACCGCCGAGAGACAAGGACGGGGAGAAGGCCGACGAGGACTGCATCACCATCAGCGATGATGAAGAAGttCGCGAACCGTCCCGGCTCATGGCGGAAGCTGGGATGGAGACCAACGAATTTGTGTCAAAATATAGATCTGTGCGCTCGCACTTCGGCAAAGATGAGGCGTGTTACATTATGGACGCCAAGGTGCAGGGGAACATCGGCAGGTATCTTAATCACTCGTGCATGCCGAACGTGTTCGTTCAGAACGTGTTCGTGGACACGCACGACCCGCGCTTCCCCTGGGTCGCGTTCTTCGCGCTGTCGCACATCAAGGCGGGCACCGAGCTCACCTGGAACTACAACTACGACGTCGGCTCCGTGCCCGGCAAGATGCTCTACTGCCTCTGCGGCGCGCCCAACTGCCGCGGCCGGCTGCTGTAG
Protein Sequence
MQHDSTPSSSVETRAKRRMSSAHESAAKRPAIPLGYAPLDSDRSSHQELFYSGENSKADDDKDIAVLKVSAESAPQDLPPPGELARPPLRADQCVYAMRNSFGSWSRAKILDVQGKGQVVGHAFTVCRVKLFSKNQTKTKLITARCIAYAEPAEVRMTIGTRVIALFRDPMNTAKRDTFYSGIVAEVPNPVNSYRYLVFFDDGYVQYVRHRDTRVVCECSPLVWEEVHPHSREFVRTYLVAYPERPMVRLHAGQSLKTEWSGKWWASKVVQVDASLVQVQFAEDDRTEWIYRGSTRLAPLYHELQAAERHRTRPMPRTKAQPRFNMPYVEYTRSDEQNRSEHPVMSSRIVSAHEREIRQRAVAKKSTAMPPAPTQDENDISRVVFYTPRNTVRPHKFVPHACSEACKRDDTLALKDLRTYNPLAKPLLSGWERQIVRFNGIKQVMYRAPCGRRVRNIWELHRYLRLAHSDMPVDLFDFSAHTHCLSEFVINSHYVWKKDLSHGKENVPVPCVNYFDDSLPEFCSYNTERTPTAGVPLNLDPEFLCGCDCTDDCEDKTKCACWKMTLEGARTIGLRGNNVGYVYKRLPDPLPSGIYECNSRCKCKNTCLNRVAQHPLQLKLQVFKTRNRGWGIRTLNDVPKGAFLCVYAGNLLTDATATMDGLNEGDEYLAELDYIEVVEQMKEGYEEDVPDADKRLDKKNIGKPEESATSSSEEEEQPSKNEKEDGDFCPGYIGMGVTEFSKRLRKRDKNKKEKAESAKEKKDKVAPKEKPPPRDKDGEKADEDCITISDDEEVREPSRLMAEAGMETNEFVSKYRSVRSHFGKDEACYIMDAKVQGNIGRYLNHSCMPNVFVQNVFVDTHDPRFPWVAFFALSHIKAGTELTWNYNYDVGSVPGKMLYCLCGAPNCRGRLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-