Cper004534.1
Basic Information
- Insect
- Cydalima perspectalis
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_951394215.1
- Location
- OX596203.1:1825595-1840152[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.26 3.3e+03 -2.4 0.5 49 49 62 62 30 107 0.48 2 3 2.1e-20 2.8e-16 60.2 6.3 1 44 125 168 125 183 0.90 3 3 2 2.6e+04 -7.6 18.3 1 48 232 278 232 306 0.71
Sequence Information
- Coding Sequence
- ATGGGGAATTTGACTAAGATGGTTACGCCTGGCAACAGTGATGAGGAAAGCGGCGACGCCTTTTCCGACGGCGATTTCGGTGACAGCGATGAGGAAACAATCATTGAACGTAGTGATGAAACGCAAAAGTCACACATGCCTGTAAATGAAACTGTTAATACAGAAATGCAGAAGTCCAGTGATGAGGCCGCGTCAAAAGCGTATACTAATGGTGTAGGGAACCAACCTAAAGTGAATGGACATAAAAATGGTGAAGTGTCTAGTGATACGGAGTGCCGTAGCAACGGTGATGTTGCAAGTGATATACGGAGAGATTCTCACGGTGACCAGAATCCCTCAATAGTCGGCATACTCGGAGATCAACAAAATcatGCGGAGCAGCGGCTGGCGGcgaggcgcgcggcgcgggcggagGCGCGCGAGATACGCATGCGCGAGCTGGAGCGGCAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCGTACGACATGTACGCAGGTACACCACGCACCTACCTTGCTTACCTTACTACGTGTCTGCTGTATGAGAGGGGCCTGGGCAGGGCagcaccacttttttacaattttccaccagccaccaacccagcccagttttgtttctggctgaatgtagttaaaggggcctactgcctctttgactttttctaccccttcggggataatgggcgtgatGCGGAGGCGGCGCTCCAGGCGGCGGCCGTCGCGCGCCTGGAGGCGCAGGTGGCGCGGCTGCGGGCGCGCCAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCCGCCTGCAGCGAGAGGCGCGGGAAGCCCTCAACCGAGTCGAGGAGTTGGAGACGGAGAACAGCCACCTGACGAAGCGGCTCGACAAGCTGAAGAACGCCAAGTCGGCGCTGCTCAAGGACCTGTGA
- Protein Sequence
- MGNLTKMVTPGNSDEESGDAFSDGDFGDSDEETIIERSDETQKSHMPVNETVNTEMQKSSDEAASKAYTNGVGNQPKVNGHKNGEVSSDTECRSNGDVASDIRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGTPRTYLAYLTTCLLYERGLGRAAPLFYNFPPATNPAQFCFWLNVVKGAYCLFDFFYPFGDNGRDAEAALQAAAVARLEAQVARLRARQDHQDEHEEALKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -