Cper002618.2
Basic Information
- Insect
- Cydalima perspectalis
- Gene Symbol
- PAXBP1
- Assembly
- GCA_951394215.1
- Location
- OX596201.1:3452500-3457732[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.45 3.9e+03 -2.3 0.0 26 41 340 355 336 357 0.88 2 4 0.00045 3.9 7.5 0.0 4 42 384 422 381 425 0.88 3 4 0.0004 3.5 7.7 0.0 4 42 450 488 447 491 0.88 4 4 5.7e-16 5e-12 46.5 0.0 4 190 517 683 514 706 0.83
Sequence Information
- Coding Sequence
- ATGCAAGAGCTGCAGTCGGAGCGCGCGGCGACGGCGGCGCGGCGCTCAGAGGCggaggcgcggcgcgcggcggcggcgcgcacgcggcaggcgcgtgcgcagcgctgCCCGCAGCTGGACGCGCGCTACCGGCGCGCGCAGGCCGCAAGGGGGTACCTCACCGATCTGGTCGAGTGTTTGGACGAGAAGATGCCGGAGCTGGAGGCGCTGGAGGCGCGCGCGCTGGCGCTGCACCGCTGGCGCTGCGAGTTCCTGGTGGAGCGGCGCCGCGCCGACGTGCGCGACCAGGCCCACGACGTGCTCGCGCTCACCGCGCGTCCGGGCGCCGCGAAGCCGGTGGAGACGGAGGAGAAGCGGCGGCGCTGCGCCGAGCGCGaggggcggcggcgggcgcggcggcggcggcgcgaggcgcaggcggcggcgctggcggcggccgcgcccgcgcaccgcgACGGGGACTCCAGCGACGACGACCTGCCGCCGGCCGAGCTGCACCACTACCGCTCCGAGAGGGACGCAATCCGCGCGGGCAGCGCTGCTCTATtcgcggacgcgctggcggcgtGGCGCAGCGTGCGCGGCGTGTGCGCACGCCTGGCGCGCTTCCGGCgccgcgcgcggcgcgctctaCAGCGACGCCTACGTGCCCGACTGCCTGCCGCGCCTGCTCGCGCCCTACGTGCGACACCAGGTACAGAgtgcgtgtgcgcgtgcgcggcgtgtGCGCACGCCTGGCGCGCTtccggcgccgcgcgcgcgcgctctACAGCGACGCCTACGTGCCCGACTGCCTGCCGCGCCTGCTCGCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGACTGCCTGCCGCGCCTGCTCGCGCCCTACGTGCGACACCAGGTACAGACGCCTACGTGCCCGACTGCCTGCCGCGCCTGCTTGCGCCCTACGTGCGACACCAGGTACAGAgtgcgtgtgcgcgtgcgcggcgtgtGCGCACGCCTGGCGCGCTtccggcgccgcgcgcgcgcgctctACAGCGACGCCTACGTGCCCGACTGCCTGCCGCGCCTGCTCGCGCCCTACGTGCGACACCAGGTACAGACGCCTACGTGCCCGACTGCCTGCCGCGCCTGCTTGCGCCCTACGTGCGACACCAGGTACAGAgtgcgtgtgcgcgtgcgcggcgtgtGCGCACGCCTGGCGCGCTtccggcgccgcgcgcgcgcgctctACAGCGACGCCTACGTGCCCGACTGCCTGCCGCGCCTGCTCGCGCCCTACGTGCGACACCAGGTACAGACGACGCCTACGTGCCCGACTGCCTGCCGCGCCTGCTCGCGCCCTACGTGCGACACCAGGTACAGAgtgcgtgtgcgcgtgcgcggcgtgtGCGCACGCCTGGCGCGCTtccggcgccgcgcgcgcgcgctctACAGCGACGCCTACGTGCCCGACTGCCTGCCGCGCCTGCTCGCGCCCTACGTGCGACACCAGCTCATTTTATGGAACCCGCTGGCGGACGAAGACAATGAGGACTACGAGAAAATGGACTGGTACAAATGTCTGATGATGTACGGCGTCCAGCCCGAGAAGCTGTCGAGCGAGTCGTCGGGCTCCGACGACGAAGAGGTGGAGGAGGTCCCGATCCTCACAGAGGACCTGGTTCGGGAGGACCCTGACCTGTACCTAGTGCCGACGCTGGTCAACCGTGTTGTTCTACCGAAGCTTACAGAGTTGGTGGAGCACGCGTGGGACCCGATGTGCGTGCGCGCGTGCGTGCGCCTGCGCCAGCTGATggtgcgcgccgccgcgctgccggccgcgcgcgccgccctcgCGCGCctggccgccgccgcgcgcgcgcgcctcgccgccgcgctgcacgccgaCGTGTTCCTGCCGCCGCAGGTGACGGAGGGCCCGGGGCAGCAGTTCTGGCGGCGCTGCCTGGGCGCGGGCGTGCGGCTGCTGCGCGCGGCGCTCGCGCTGAcggcgccgcccgcgctgctgcgcgccgACCCGCTCGTGCTGGCGCTCGTCGACACGTTGAGCTGCGCGGCGGGCGCAGCGCCAGGACCGAgcgcagcggcggcggcggcggcgctggccgAGACGCTGCCGCGCGCCGGACAcctgcgcgccgccgcgctcgcccgCCTGGCCGGCCTCGCGCGCGTCGCGCTGGCGCGCCTCGACACCGACAACCCGCTGCATCTGAAATCGCTGGAGCAGGCTCGCGCCGTGATAGCGGAGGCGCGCGCGGCGGAATGA
- Protein Sequence
- MQELQSERAATAARRSEAEARRAAAARTRQARAQRCPQLDARYRRAQAARGYLTDLVECLDEKMPELEALEARALALHRWRCEFLVERRRADVRDQAHDVLALTARPGAAKPVETEEKRRRCAEREGRRRARRRRREAQAAALAAAAPAHRDGDSSDDDLPPAELHHYRSERDAIRAGSAALFADALAAWRSVRGVCARLARFRRRARRALQRRLRARLPAAPARALRATPGTECVCACAACAHAWRASGAARARSTATPTCPTACRACSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDCLPRLLAPYVRHQVQTPTCPTACRACLRPTCDTRYRVRVRVRGVCARLARFRRRARALYSDAYVPDCLPRLLAPYVRHQVQTPTCPTACRACLRPTCDTRYRVRVRVRGVCARLARFRRRARALYSDAYVPDCLPRLLAPYVRHQVQTTPTCPTACRACSRPTCDTRYRVRVRVRGVCARLARFRRRARALYSDAYVPDCLPRLLAPYVRHQLILWNPLADEDNEDYEKMDWYKCLMMYGVQPEKLSSESSGSDDEEVEEVPILTEDLVREDPDLYLVPTLVNRVVLPKLTELVEHAWDPMCVRACVRLRQLMVRAAALPAARAALARLAAAARARLAAALHADVFLPPQVTEGPGQQFWRRCLGAGVRLLRAALALTAPPALLRADPLVLALVDTLSCAAGAAPGPSAAAAAAALAETLPRAGHLRAAALARLAGLARVALARLDTDNPLHLKSLEQARAVIAEARAAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -