Basic Information

Insect: Cyclophora punctaria
Gene Symbol: -
Assembly: GCA_951394245.1
Location: OX596179.1:8845295-8852778[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 8.7 6.5e+02 1.5 0.2 1 23 83 106 83 106 0.93

2 19 0.025 1.8 9.6 1.2 3 23 136 157 134 158 0.94

3 19 8.1 6e+02 1.6 0.2 3 23 424 445 422 445 0.92

4 19 0.0063 0.46 11.4 0.0 1 21 453 473 453 474 0.94

5 19 5.7 4.3e+02 2.1 1.9 2 14 484 496 483 505 0.77

6 19 1.6 1.2e+02 3.9 0.7 1 21 521 541 521 544 0.79

7 19 0.00058 0.043 14.7 1.0 1 23 553 576 553 576 0.93

8 19 4.4 3.3e+02 2.5 4.5 7 23 625 643 618 643 0.83

9 19 0.18 14 6.8 0.0 2 23 655 677 655 677 0.89

10 19 1.1 78 4.4 1.5 2 23 680 702 679 702 0.92

11 19 0.00057 0.042 14.7 4.0 1 23 708 730 708 730 0.95

12 19 3.2e-05 0.0024 18.6 1.4 1 23 737 759 737 759 0.97

13 19 5.6e-05 0.0041 17.9 1.0 1 23 764 786 764 786 0.96

14 19 0.0015 0.11 13.4 1.6 1 23 792 814 792 814 0.98

15 19 2.1e-06 0.00016 22.3 2.3 1 23 820 842 820 842 0.98

16 19 0.00037 0.028 15.3 1.9 2 23 849 870 849 870 0.98

17 19 0.0037 0.28 12.1 0.9 2 23 880 902 880 902 0.98

18 19 6e-05 0.0044 17.8 0.1 1 23 907 929 907 929 0.98

19 19 0.0011 0.078 13.9 4.3 1 23 935 958 935 958 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	8.7	6.5e+02	1.5	0.2	1	23	83	106	83	106	0.93
2	19	0.025	1.8	9.6	1.2	3	23	136	157	134	158	0.94
3	19	8.1	6e+02	1.6	0.2	3	23	424	445	422	445	0.92
4	19	0.0063	0.46	11.4	0.0	1	21	453	473	453	474	0.94
5	19	5.7	4.3e+02	2.1	1.9	2	14	484	496	483	505	0.77
6	19	1.6	1.2e+02	3.9	0.7	1	21	521	541	521	544	0.79
7	19	0.00058	0.043	14.7	1.0	1	23	553	576	553	576	0.93
8	19	4.4	3.3e+02	2.5	4.5	7	23	625	643	618	643	0.83
9	19	0.18	14	6.8	0.0	2	23	655	677	655	677	0.89
10	19	1.1	78	4.4	1.5	2	23	680	702	679	702	0.92
11	19	0.00057	0.042	14.7	4.0	1	23	708	730	708	730	0.95
12	19	3.2e-05	0.0024	18.6	1.4	1	23	737	759	737	759	0.97
13	19	5.6e-05	0.0041	17.9	1.0	1	23	764	786	764	786	0.96
14	19	0.0015	0.11	13.4	1.6	1	23	792	814	792	814	0.98
15	19	2.1e-06	0.00016	22.3	2.3	1	23	820	842	820	842	0.98
16	19	0.00037	0.028	15.3	1.9	2	23	849	870	849	870	0.98
17	19	0.0037	0.28	12.1	0.9	2	23	880	902	880	902	0.98
18	19	6e-05	0.0044	17.8	0.1	1	23	907	929	907	929	0.98
19	19	0.0011	0.078	13.9	4.3	1	23	935	958	935	958	0.97

Sequence Information

Coding Sequence: atgTCTTCCGACGATTCGGACGACGAACCGCTGTCGGTGCTCGCTAAATCTAAACAAATAGTCAATGGAGGTCTCGAAATATTTCCTGTGAATACTAAGAAGAAACCAAAGAAAAGTAGCTTTAAATCGAAGAGGCCGTGCGGTGTGACTATACAGCTGCAGAAGGTAAAGGAGTCACCGCCTGCAGTTATTGAGCGGCCCGCTGATGTCTGGATGTACTTGAAGGATCTCAACCCTATAGGTCCTTACAGTTGTCTTCTCTGTTCAGAATGGTTCATAAACAAGACTAAAGTAGCCCTGCATTATATTGTTAATCATAAGAAAAGTTACTGTGGAATATGCAGATATTTTATGCCAAGTCAAGAAGCCGGATTTGCTCACGAGCAGTATCATGCACCCTGGGCATGTTCCCAGTGTGATAACATCTTTGAAACTATGAGAGAGCTTCGGAAACACTTCAGAGAGGACCATCACTTAGTCCACTGCCATCTCTGTTATACCAGAGCCCCTCATGGCGAAGAGTACAGTACCCATCTCTTCCAAAAACATAGTGTAACAAATGTATCTAGAATAGATGAAGACGTCTTCTGGATATTTGACGAGAGCAATCTGAAATTCAAATGCTTACTCTGTGCCAAAGCCAATAACGGCTTAAAAACATTTGCTAACCACTACATGGCGTTCCACAGGATGACATTAAAATGTCTAGCATGGCTTCTGTCAGGGAAAGGGTTCCAGTTCCAAATTAAAGGAGTAGATTTAACTGCACATTATGTGGAATCTGAGTTGAAACCGTTTAGAAAGTTTGGTTACGTTGATCTCGAAACTCAACCTAATTATGTCAACAATATACCAGCAAATAACACATCTAATTATGAAACTATGGAGACAATGTCAGATGTAAATTATAGTACAGAACACaatatacaaattaaacatGAAATAACATTTGAGTTTGGTGAAGATAATAATGGAAACAGAAATGATGATGATGGAAATAATGATAATGGATTTAATGATGACTATCAAGATAATGATAATACAGTTGATGTCAAAAATGAAGTCCCAGATGAATTAGCTCTTGAAGTTATGAAGAGCTACAAAGGGGTAGAAGATTTTGATGTAACTCTAATGGAAATGGTCATTATACAGAAATGTTATTCAGAATACTTGAGTCAAACTATGAAAGACATTAATTCTAACCTAATGCCTACAATTTCGGACATAAACTATGATAATGCAACAGCAGATAAACTGTTAAACATAGACTGTAGTTTATGCacagaaaaaataacaacaatgaATGTTTTCATCAATCATATGGTCAAGATGCATTCTGTCAAAGTTGTGTCAACATTTTCCTGCAGAGTTTGTGCTACAGTTTTTGATACTGCTTCAGAGTTAGAACAACATGTTAATGAGGAGTTGGGAGACTTTGAAGATCTGTGGATGTGCCAGTTTTGTGACAAAGAGTTTGACGATAGACCGAAGACTCGGTGTCATTTGACTGAACACTGGAATGACATAGAGACAGATAACTGCTTCAGTCCACATTTAGGCTTCAAGTGTAAATACTGTCCGACTTTGTTCTGGAACGAAGTTGAGAGGGAGAAACACCAAGTTCAGACACATTTTGACAGTTATAGGGAGGACTTTTATAAGTGTGCTAAATGTGAAGAGGTGTTTACTGATAAGGTCTGGCTAATCCACCATTTCCTGCAAAGTCATCAGAATGGTAAAGATCCCGTACCAATCTACCTTCTCAAGTGCAGTTTGTGTTGCTTGGTGTTGCCAACGGTGGAAGACATGAGAATCCACTTCAATATGACCCATCCAGAGGCGAAGAAGGTGTACTGTTCACTGGGCACTTGTAAACACAGGATTTTCAGCCATAAGAAGTCTTTTCAGTTGCATTTGAAGATGTACCACGTAAGCCCTCGTCGCTCTACAGGCGGCGGGGGATCATGTTCGGTGTGCGGCGCGGTGTTCACGAGCGGGCGCTCGCGAGCCGCGCACATTGCGCAGGCGCACCGGCTCTCCTGCTCATTGTGTAAGCGAGCGCTTAGCACCTTGGATGAACGTAAGATCCACTACCTGCTGTGCCACCCGGGCCGGCACCCGTTCCAGTGCGACGAGTGCGACAAGTCGTTCCAGTACAAGTCCTCGCTGTACCTGCACAAGCACGACCACGCGCCCAACAAGCAGGAGTTCGTGTGCAACTTCTGCGATAAGACCTTTAAGAAGCGTGATTCGTTCCGCGAGCACGTAGCCATCCACTCGGGCCCGCGGCACGCGTGCTCGTACTGCCCCGCCGTGTTCGTGCAGCGCTCGAACATGTTACGCCACGAACGAAGACATACCGGCGAGCGGCCGTACGCCTGTAACCAGTGTAATAGAACGTTCGCAGATAAGGGCGCTTGCACTTCACATGCCAGGACTCATCAAAAAGAGCCTTCGTTTTCGTGCATGTACTGCGGACAATCGTTCGTGCAGAAGTCGAAACTCACTTATCATATTAGAAAACATACTGGAGAaaaTCTGGAAACATGTTCGATATGCTCGAAGATGTTCACGAGCGGCTGCGCGCTCCGCGAACATATGAAAGTGCATGAAAAGAAGCCTCCAGAAGCAACAGCCAAATGTCCTCTTTGTGGCAAATGGTACAAGAGCGAGAAGTACATGATGAAGCACGTGCGCACCACGCACGCCGGCGTGCGCTTCACGTGCCCCATCTGCAACAAGAAGGTCACCAGCGCCGTGTCGCTGCGGGAGCACGTGCTCTCGCATACCAATGTCAAGACTTTTAGGTGTAAAATCTGTCCAAAGACGTACAACGTCAAACGCACAATGATCCGCCATTTATGTCGTCGCCACGGTTGCGATCCAGACGGCAACCTCTTACAACACTACGACCGCCTCGACCCAAGAGATTGCAATTTAAACCTTGACGAGGAAACAATAACGAGCATATTCGGACCACGCAAACGGAAAGTCAATGACGTGCTTATTAGCGACTATGTCACTGTGAATGTCAACAACGAATTGAATGTAAACAAACAGGTGAATGTTCAAGAGTCGGAAAGTGATAAGGAGAGTGAGAAGGACAGCGATAGAGAGAGTGAGGAGGAAGATATGAATGTGACGGTGAAACAGGAGCCTATGGAAGATGATGGCGCCAAAGTAGAACCAACGGATTTTGTGAGCGTTAAGATTGAATGCGTTGAACATATGGACCTGGATAATACAGCTTGA
Protein Sequence: MSSDDSDDEPLSVLAKSKQIVNGGLEIFPVNTKKKPKKSSFKSKRPCGVTIQLQKVKESPPAVIERPADVWMYLKDLNPIGPYSCLLCSEWFINKTKVALHYIVNHKKSYCGICRYFMPSQEAGFAHEQYHAPWACSQCDNIFETMRELRKHFREDHHLVHCHLCYTRAPHGEEYSTHLFQKHSVTNVSRIDEDVFWIFDESNLKFKCLLCAKANNGLKTFANHYMAFHRMTLKCLAWLLSGKGFQFQIKGVDLTAHYVESELKPFRKFGYVDLETQPNYVNNIPANNTSNYETMETMSDVNYSTEHNIQIKHEITFEFGEDNNGNRNDDDGNNDNGFNDDYQDNDNTVDVKNEVPDELALEVMKSYKGVEDFDVTLMEMVIIQKCYSEYLSQTMKDINSNLMPTISDINYDNATADKLLNIDCSLCTEKITTMNVFINHMVKMHSVKVVSTFSCRVCATVFDTASELEQHVNEELGDFEDLWMCQFCDKEFDDRPKTRCHLTEHWNDIETDNCFSPHLGFKCKYCPTLFWNEVEREKHQVQTHFDSYREDFYKCAKCEEVFTDKVWLIHHFLQSHQNGKDPVPIYLLKCSLCCLVLPTVEDMRIHFNMTHPEAKKVYCSLGTCKHRIFSHKKSFQLHLKMYHVSPRRSTGGGGSCSVCGAVFTSGRSRAAHIAQAHRLSCSLCKRALSTLDERKIHYLLCHPGRHPFQCDECDKSFQYKSSLYLHKHDHAPNKQEFVCNFCDKTFKKRDSFREHVAIHSGPRHACSYCPAVFVQRSNMLRHERRHTGERPYACNQCNRTFADKGACTSHARTHQKEPSFSCMYCGQSFVQKSKLTYHIRKHTGENLETCSICSKMFTSGCALREHMKVHEKKPPEATAKCPLCGKWYKSEKYMMKHVRTTHAGVRFTCPICNKKVTSAVSLREHVLSHTNVKTFRCKICPKTYNVKRTMIRHLCRRHGCDPDGNLLQHYDRLDPRDCNLNLDEETITSIFGPRKRKVNDVLISDYVTVNVNNELNVNKQVNVQESESDKESEKDSDRESEEEDMNVTVKQEPMEDDGAKVEPTDFVSVKIECVEHMDLDNTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00407000;
90% Identity: iTF_00407000;
80% Identity: -