Basic Information

Insect: Cyclophora albipunctata
Gene Symbol: -
Assembly: GCA_963082685.1
Location: OY720124.1:1976421-1984500[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 8.8 6.7e+02 1.5 0.2 1 23 84 107 84 107 0.93

2 19 0.074 5.7 8.0 0.3 3 23 137 158 135 158 0.89

3 19 8.2 6.2e+02 1.6 0.2 3 23 429 450 427 450 0.92

4 19 0.024 1.9 9.6 0.0 1 21 458 478 458 479 0.94

5 19 2.2 1.7e+02 3.4 0.4 2 14 489 501 488 511 0.79

6 19 1.6 1.2e+02 3.9 0.7 1 21 526 546 526 549 0.79

7 19 0.00059 0.045 14.7 1.0 1 23 558 581 558 581 0.93

8 19 4.5 3.4e+02 2.5 4.5 7 23 630 648 623 648 0.83

9 19 0.19 14 6.8 0.0 2 23 660 682 660 682 0.89

10 19 1.1 81 4.4 1.5 2 23 685 707 684 707 0.92

11 19 0.00057 0.044 14.7 4.0 1 23 713 735 713 735 0.95

12 19 3.2e-05 0.0025 18.6 1.4 1 23 742 764 742 764 0.97

13 19 5.7e-05 0.0043 17.9 1.0 1 23 769 791 769 791 0.96

14 19 0.0015 0.11 13.4 1.6 1 23 797 819 797 819 0.98

15 19 2.1e-06 0.00016 22.3 2.3 1 23 825 847 825 847 0.98

16 19 0.00038 0.029 15.3 1.9 2 23 854 875 854 875 0.98

17 19 0.0038 0.29 12.1 0.9 2 23 885 907 885 907 0.98

18 19 6.1e-05 0.0046 17.8 0.1 1 23 912 934 912 934 0.98

19 19 0.0018 0.14 13.1 4.3 1 23 940 963 940 963 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	8.8	6.7e+02	1.5	0.2	1	23	84	107	84	107	0.93
2	19	0.074	5.7	8.0	0.3	3	23	137	158	135	158	0.89
3	19	8.2	6.2e+02	1.6	0.2	3	23	429	450	427	450	0.92
4	19	0.024	1.9	9.6	0.0	1	21	458	478	458	479	0.94
5	19	2.2	1.7e+02	3.4	0.4	2	14	489	501	488	511	0.79
6	19	1.6	1.2e+02	3.9	0.7	1	21	526	546	526	549	0.79
7	19	0.00059	0.045	14.7	1.0	1	23	558	581	558	581	0.93
8	19	4.5	3.4e+02	2.5	4.5	7	23	630	648	623	648	0.83
9	19	0.19	14	6.8	0.0	2	23	660	682	660	682	0.89
10	19	1.1	81	4.4	1.5	2	23	685	707	684	707	0.92
11	19	0.00057	0.044	14.7	4.0	1	23	713	735	713	735	0.95
12	19	3.2e-05	0.0025	18.6	1.4	1	23	742	764	742	764	0.97
13	19	5.7e-05	0.0043	17.9	1.0	1	23	769	791	769	791	0.96
14	19	0.0015	0.11	13.4	1.6	1	23	797	819	797	819	0.98
15	19	2.1e-06	0.00016	22.3	2.3	1	23	825	847	825	847	0.98
16	19	0.00038	0.029	15.3	1.9	2	23	854	875	854	875	0.98
17	19	0.0038	0.29	12.1	0.9	2	23	885	907	885	907	0.98
18	19	6.1e-05	0.0046	17.8	0.1	1	23	912	934	912	934	0.98
19	19	0.0018	0.14	13.1	4.3	1	23	940	963	940	963	0.97

Sequence Information

Coding Sequence: atgTCTTCCGACGATTCGGACGACGAACCGCTGTCGGTGCTCGctaaatctaaacaaataGTCAATGGAGGTCTCGAAATATTTCCTGTGAATACTAAGAAGAAGAAACCAAAGAAAAGTAGCTTTAAATCGAAGAGGCCGTGCGGTGTGACTATACAGCTGCAGAAGGTAAAGGAGTCACCGCCTGCAGTTATTGAGCGGCCTGCTGATGTCTGGATGTACTTGAAGGATCTCAACCCTATAGGTCCTTACAGTTGTCTTCTCTGTTCAGAATGGTtcataaacaaaactaaagTAGCCCTGCATTATATTGTTAATCATAAGAAAAGTTACTGTGGAATATGCAGATATTTCATGCAAAGTCAAGAAGCCGGATTTGCTCACGAGCAGTATCATACACCCTGGGCATGTTCCCAGTGTGATAACATCTTTGAAACTATGAGAGAGCTTCGGAAACACTTCAGCGAGGACCACCACTTAGTCCACTGCCATCTCTGTTATACCAGAGTCCCACATGGCGAAGAGTACAGTACCCATCTCTTCCAAAAACATAGTGTAACAAATGTATCTAGAATAGATGAAGACGTCTTCTGGATATTTGACGAGAACAATCTGAAATTCAAATGCTTACTCTGTGCCAAAGCCAATAACGGCTTAAAAACATTTGCTAACCACTACATGGCGTTCCATAGGATGACATTAAAATGTCTAGCATGGCTTCTATCAGGAAAAGGGTTCCAGTTCCAAATTAAAGGAGTAGATTTAACTGCACATTACGTGGAATCTGAGTTGAAACCGTTTAGAAAGTTTGGTTACGTTGATCTTGAAACTCAACCTAACTATGTCAACAACATACCAGCAAATAATTTCACTAATACCACATCTAATTATGATACTATGGAGACAATGTCAGATGTAAATTATAGTACAGAACacgatataaaaattaaacatgaaaTAACATTTGAGTTTGGTGAAGATGATAATGGAAACAGAAATGATGATGATGGAAATAATGATAATGGATTTAATGATGACTATCAAGAAAATGATAATACAGTTGATGTCAAAAATGAAGTCCCAGATGAATTAGCTCTTGAAGTTATGAAAAGCTACAAAGGGGTAGAAGATTTTGATGTAACTCTAATGGAAATGGTCATTATACAGAAATGTTATTCAGAATACTTGAGTCAAACTATGAAAGACATTAATTCTAACATCATGCCTACAATTTCGGACATAAACTATGATAATGCAACAGCAGATAAACTGTTAAACATAGACTGTAGTTTATGCACAGAGAAAATAACAACAATGAACGTTTTCATCAATCATATGGTCAAGATGCATTCTATCAAAGTTGTGTCAACATTTTCCTGCAGAGTTTGTGCTACAGTTTTTGATACTGCTACCGAGTTAGAACAACACGTTAATGAGGAGTTGGGAGACTTTGAAGATCTGTGGATGTGCCAGTTTTGTGATAAGGAGTTTGACGATAGACCAAAGACTCGGTTTCATTTGACAGAACACTGGAATGACATAGAGACAGATAACTGCTTCAGTCCACATTTAGGCTTTAAGTGTAAATACTGTCCGACTTTGTTCTGGAATGAAGTTGAGAGAGAGAAACACCAAGTTCAGACACATTTTGACAGTTATAGGGAGGACTTTTATAAGTGTGCTAAATGTGAAGAGGTGTTTACTGATAAGGTCTGGCTAATACACCATTTCCTGCAAAGCCATCAGAATGGTAAAGAGCCTGTACCGATCTACCTTCTCAAGTGCAGTCTGTGTTGCTTGGTGTTGCCGACAGTGGAAGACATGAGAATCCACTTCAATATGACCCATCCAGAGGCGAAGAAGGTGTACTGTTCACTGGGTACTTGTAAACACAGGATATTCAGCCATAAGAAGTCTTTTCAGTTGCATTTGAAGATGTACCACGTAAGCCCTCGTCGCTCCACAGGCGGCGGGGGATCATGTTCGGTGTGCGGCGCGGTGTTCACGAGCGGCCGCTCGCGAGCCGCGCACATTGCGCAGGCGCACCGGCTCTCCTGCTCATTGTGTAAGCGAGCGCTTAGCACCTTGGATGAACGTAAGATCCACTACCTGCTGTGCCACCCGGGCCGGCACCCGTTCCAGTGCGACGAGTGCGACAAGTCGTTCCAGTACAAGTCCTCGCTCTACCTGCACAAGCACGACCACGCGCCCAACAAGCAGGAGTTCGTGTGCAACTTCTGCGATAAGACTTTTAAGAAGCGTGATTCGTTCCGCGAGCACGTAGCCATCCACTCGGGCCCGCGGCACGCGTGCTCGTACTGCCCCGCCGTGTTCGTGCAGCGCTCGAACATGTTACGCCACGAACGGAGACATACCGGCGAGCGGCCGTACGCCTGTAACCAGTGTAATAGAACGTTCGCAGATAAGGGCGCATGTACTTCACATGCCAGGACTCATCAGAAAGAGCCCTCGTTTTCGTGCATGTACTGCGGACAATCGTTCGTGCAGAAGTCGAAACTCACTTATCATATTAGAAAACATACGGGGGAAAATCTGGAAACATGTTCAATATGCTCGAAGATGTTCACGAGTGGCTGCGCGCTCCGCGAACATATGAAAGTGCATGAAAAGAAGCCTCCAGAAGCGACTGCCAAATGTCCTCTTTGTGGCAAATGGTACAAGAGCGAGAAGTACATGATGAAGCACGTGCGCACCACGCACGCCGGCGTGCGCTTCACGTGCCCCATCTGCAACAAGAAGGTCACCAGCGCCGTGTCGCTGCGGGAGCACGTGTTGTCCCATACCAATGTCAAGACATTTAGGtgTAAAATCTGTCCAAAGACATACAACGTCAAACGCACAATGGTCCGCCATTTATGTCGTCGCCACGGTTGCAATCCAGACGGCAACCTCTTACTACACTACGACCGCCTCGACCCAAGAGATTGCAATTTAAACCTTGACGAGGAAACAATAACGAGCATATTCGGACCGCGCAAACGGAAAGTCAATGACGTGCTTATTAGCGACTATGTCACTGTGAATGTCAACAACGAAttgaatgtaaacaaacaagagAATGTTGAAGAGTCGGAAAGTGATAAGGAGAGTGAGAAGGACAGCGATAGAGAGAGCGAGGAGGAAGATATGAATGTGACGGTGAAACAGGAGCCTATGGAAGATGATGGCGCCAAAGTAGAACCAACGGATTTTGTGAGCGTTAAAATTGAATGCGTTGAACATATGGACCAGGATGATACAGCTTGA
Protein Sequence: MSSDDSDDEPLSVLAKSKQIVNGGLEIFPVNTKKKKPKKSSFKSKRPCGVTIQLQKVKESPPAVIERPADVWMYLKDLNPIGPYSCLLCSEWFINKTKVALHYIVNHKKSYCGICRYFMQSQEAGFAHEQYHTPWACSQCDNIFETMRELRKHFSEDHHLVHCHLCYTRVPHGEEYSTHLFQKHSVTNVSRIDEDVFWIFDENNLKFKCLLCAKANNGLKTFANHYMAFHRMTLKCLAWLLSGKGFQFQIKGVDLTAHYVESELKPFRKFGYVDLETQPNYVNNIPANNFTNTTSNYDTMETMSDVNYSTEHDIKIKHEITFEFGEDDNGNRNDDDGNNDNGFNDDYQENDNTVDVKNEVPDELALEVMKSYKGVEDFDVTLMEMVIIQKCYSEYLSQTMKDINSNIMPTISDINYDNATADKLLNIDCSLCTEKITTMNVFINHMVKMHSIKVVSTFSCRVCATVFDTATELEQHVNEELGDFEDLWMCQFCDKEFDDRPKTRFHLTEHWNDIETDNCFSPHLGFKCKYCPTLFWNEVEREKHQVQTHFDSYREDFYKCAKCEEVFTDKVWLIHHFLQSHQNGKEPVPIYLLKCSLCCLVLPTVEDMRIHFNMTHPEAKKVYCSLGTCKHRIFSHKKSFQLHLKMYHVSPRRSTGGGGSCSVCGAVFTSGRSRAAHIAQAHRLSCSLCKRALSTLDERKIHYLLCHPGRHPFQCDECDKSFQYKSSLYLHKHDHAPNKQEFVCNFCDKTFKKRDSFREHVAIHSGPRHACSYCPAVFVQRSNMLRHERRHTGERPYACNQCNRTFADKGACTSHARTHQKEPSFSCMYCGQSFVQKSKLTYHIRKHTGENLETCSICSKMFTSGCALREHMKVHEKKPPEATAKCPLCGKWYKSEKYMMKHVRTTHAGVRFTCPICNKKVTSAVSLREHVLSHTNVKTFRCKICPKTYNVKRTMVRHLCRRHGCNPDGNLLLHYDRLDPRDCNLNLDEETITSIFGPRKRKVNDVLISDYVTVNVNNELNVNKQENVEESESDKESEKDSDRESEEEDMNVTVKQEPMEDDGAKVEPTDFVSVKIECVEHMDQDDTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00407827;
90% Identity: iTF_00407827;
80% Identity: -