Cpun003824.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cyclophora punctaria
Gene Symbol
-
Assembly
GCA_951394245.1
Location
OX596171.1:1866675-1873341[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 0.005 0.37 11.7 1.0 2 23 201 223 200 223 0.95
2 30 0.0006 0.045 14.6 0.2 2 20 251 269 250 271 0.93
3 30 5.1e-05 0.0038 18.0 0.9 2 23 300 322 300 322 0.97
4 30 0.0035 0.26 12.2 0.1 1 23 384 407 384 407 0.95
5 30 0.0089 0.66 10.9 0.2 1 23 422 444 422 444 0.96
6 30 0.28 21 6.2 3.8 2 23 481 502 480 502 0.95
7 30 0.0012 0.092 13.6 4.0 2 23 544 566 544 566 0.97
8 30 0.00058 0.043 14.7 1.9 1 23 616 639 616 639 0.94
9 30 0.0017 0.13 13.2 0.2 1 23 693 715 693 715 0.97
10 30 0.017 1.3 10.1 7.5 1 23 726 748 726 748 0.98
11 30 0.028 2.1 9.4 0.7 2 23 760 781 759 781 0.96
12 30 0.0032 0.24 12.3 1.0 1 23 791 813 791 813 0.98
13 30 0.0019 0.14 13.1 3.0 1 23 841 863 841 863 0.97
14 30 0.00072 0.054 14.4 5.1 1 23 874 896 874 896 0.98
15 30 0.00031 0.023 15.5 2.7 1 23 904 926 904 926 0.98
16 30 0.0028 0.21 12.5 0.3 2 23 946 968 945 968 0.97
17 30 2 1.5e+02 3.5 1.2 1 23 986 1008 986 1008 0.86
18 30 1.6 1.2e+02 3.9 2.5 1 23 1015 1037 1015 1037 0.88
19 30 0.026 1.9 9.5 0.2 2 23 1048 1070 1047 1070 0.94
20 30 0.00031 0.023 15.5 0.8 2 23 1093 1114 1092 1114 0.95
21 30 0.12 9.2 7.3 0.4 2 20 1118 1136 1117 1137 0.93
22 30 0.052 3.8 8.5 1.4 2 23 1157 1179 1156 1179 0.96
23 30 0.00081 0.06 14.2 0.8 1 23 1194 1216 1194 1216 0.96
24 30 0.26 19 6.3 3.7 5 23 1226 1244 1224 1244 0.94
25 30 0.013 0.99 10.4 0.8 2 23 1255 1277 1254 1277 0.95
26 30 0.47 35 5.5 3.9 3 23 1295 1312 1294 1312 0.93
27 30 2.8 2e+02 3.1 2.6 2 21 1316 1335 1315 1336 0.92
28 30 0.13 9.5 7.3 0.9 2 23 1385 1406 1384 1406 0.94
29 30 0.038 2.8 9.0 0.6 2 23 1417 1439 1416 1439 0.94
30 30 0.16 12 7.0 6.1 2 21 1477 1496 1476 1497 0.95

Sequence Information

Coding Sequence
ATGGCCCTCAAACTTGGAAAATGCAGGCTCTGCCTCAAGCTTGGAGATTTTTACTCCATCTTCACGGTGGACAATGCCATCCAACTAGCGGAGATGGTTATGGAATGTACCAAAGTAAAGATTTACAATGGAGATGGACTGCCGGACAAAGTTTGCTCGGAATGCATACAGAAGTTGAGTAGTGCTTATATATTTAAGCAACAATGTGAAAGGGCAGATGAAGAGCTTAGACGGAACTATGTTCCTCCACCAGGTTTCAGCATCAGCCCACCGCCACCAAACAGGCAAAGTAGTGACTCAGCATTTTCAACACACACTGACACCTCCAACCTGAAACTAAATGATAGTAAGGTGACTCCAGTTAGTAGAAGTAGGAAAAGAAGCATTGAGAGTGACAATGCATCCATTGGCAGTCGGTCTCGTGACTATAGTAGACCCACCAGCTCGAAACGTGTGCAGGAATTGCGGCAGACTCAAAAGCGACAGCGTATGTCTCCCAACAACTCACAACTTGACCCTGATTATGATGACTTCAGTGGCGACTCAAGCTATGTGCCAGAAACAGATGATTCCGACGAGCACATCATGCAGGATATCATCCAGTGTAACATATGtctaaaaacattcaaatggAAGAAAAGCCTTAAGTATCACATGGAGAATGTTCACAAGACCTCCCTGAATAATGATATTCCGACATCTACTCCTAAAAAGAGCATCGAAAATAATACAGAAGAACAAGAAAAGTCAAGTTGTGACAAATGTggaaaaacattcaaattaaaGATCATGTTGAAAAGGCATGCGGAAATATGTGAACTTCCTATAGAAAAATCTCCGAAAAAGGAACTTTTTATATCTTTAGAACCCATTGATGCTGTACATCATAAAAAACCAACATGTCAATACTGTTCAGCCAAGTTTAAAACTACAGATAACTTGGAGAAACATTTGAGAGTAGTTCATGCTGCAACTTTGAAACCAGAAACTCAAGGATCCGGTTCCCAAAACACGTCCTTCACTCGCGCCAATAACACAGAGAAGAAAACAACTGCAGTGCCATGCCTTTACTGTATGAAGAAGTTTTCAGAATATCAAGATCATAATGCACATTTCAGTGTGTGTACTAAAAATGACTACCGCAAAgagtttgcttgtttgttgTGTGACAAAGTTACGATTAATAAAACGTCGTATATAAGCCACATTCGTGGTGTGCACTTTCTGATTCCTGCCGTTCCTAGAAAATCTGATGTTAACGAATTTGAATGTAGAATGTGTCAAAAGAAACTCCCAACACAGGAGAAGTTGATCAGTCATCTAGCGGCTCACATGTCGAACATTGACGAAGATGGTGATGACGTCTTCGACAGAAATGACAGCCACATGGAAGAGGCAGTATCGGTGCAAAGCTCGCAGACATCGCAGAGTGACTTGCTCAAGTGCAGAGTCTGTGACAAAGAgttcaaatataaaaaggcGTGCGAATCTCATGAACAGAAGCACGCCGCAGAAGATTCGGAATATGTGAAGCAAGAACCTCCTGATAAACCGCCCAATAGTTTGCTCAGAGAGGCACTCGAATATAGTTCCGAATCAGAATCTAGTCAAGATGAAACTGAGGATAACACATGTGATATTTGTGAAAAGCAGTTCTCTTACAAGCGTCTCTTAATCCATCATAAGAAGACGAAACATAATCAATGTTCTGGGACTAAAAGGGCAAAAATAACACTCAAGGATTGCCTCGTGAAGTGTCTCATTTGTGACGAGGAGATGAAAGTGGGCACTATCAATGAACACAACCAGAAGCATATTTCGGCGAATATTAAGCCCAGAAACGTGTATACTTGCATCCAGTGCGGACAAAAGTTTAAGAGCTGCAGCAATTTAGCTACTCATATTAAATTGATACACAGattGAAGCAGCAGCACGTGGAAAAAAAGTATATTGGCGAGATGGCGGATTTTTGTGAAGTCGTTGTGACGAAGGCGGAACCCCTGGACAATGTCCAGTCTCACAACGACTCCAAAGAGGTTCCGCCGTCCGCGGCGCCGCTCGTGAACCTGTCCGGGTTCACCTGCCCCATCTGCACTAAGACGATGCCCACGCTCATATCACTCAAGAGGCACGTCAACTGGCACTCCAATGTAGGAGACAGTTTAGAAAAGAAATACGAGTGCTTTGTCTGTAAAGAGAATTTCCGGTTTCAATGTCACTTCAAGCTCCACATGCGGGAACATTACAATGATCCGAATCTAGATTCCGAATACCTGACATGCACCATCTGCAACCGCAAGAGTAAAAACCTCCGCGCTGCGCAAGCGCACATGAACTTCCACAAACAGACTCGCTTCCAGACTAAAGACTACCAGTGCTCGATCTGCAAGCGAGTGTTCCAGTACAGGAAAGTGTACCTCTCCCACATGGCCATCCACTACAAGAAGGGCGAGTCCGGACATAACACTGTCGTAGGTGACGTCACACCAAACAACGCGAAGGCTTCCTTCGACGGTAATTTCACATGTCAGCTGTGTGGAAAGATGTGCGACTCCGAGAACTCTCTCAAACATCATCTCATATGGCACAAGTCCAAAACTCTGCTCTATGGCGCTCGACACGAGTGCCAAATATGTCAACTGCAGTTCACGAACAAGAGGCACCTCGAACTGCACACGCGATCTCACTACGAGGATGACAACGGACCGTTCAAATGTACCATCTGCGGGAAAGGTTACACAGATGAAGACTACTGTAAGCGACATATGAAGGGACACAACTTCGACCACCAATCTCACCAGAAAAGGTTGGAGAAGCTCAGGAAGGGAAAAGTCAAATGTGTGATATGTTCGCGATTCTACCCGGATCTGGTCAAGCTGATTCGCCATCTGCGACGGACGCATCCCGAAAGCAAAATGATAAAGGAGGACCCCGACGCGCCGCCGCCCAGCTACTACTCATGCAAGCTGTGCGCGCGCGTATTCCTCAACGAGCAGCGGCTCAAGCACCACGAGGAGGCCCACCAGCGGAAACCGAACATTTACAAGTGCAAGTTCTGCGGCAAGAACAGCATGTCCCTGAAGTTGCACAACATACACATCAAGGGGCACCTGACCACCAAGTACACAGACAACCCGCTGCCGTGCCCGCAGTGCGAGCAGCGCTTCGTGCTGGGCTACGCGCTGCACCGGCACCTGCGCGACGCGCACGGCGTGCGGGAGACGTGGCTGGCggagcgcggcgcggccgaGCGCGCGGGCCCGCTGCGCCCGCTGCAGTGCTCCGTGTGCCACAAGGTGCTCGCCTCCAAGGGCAACTTCGAGCGCCACATCGATTACCACAACTCGCTGCGCTGCAACTACTGCTTCGAGTACTTCAGCACGCCGCGCTTCTTGGAGGGCCATCTCACCTTCAACTGCGACAAGAGGCGGTTGGTGGGCGACACCGATCCGCACCCGAAAAGGGTCAAGTGCGATATTTGCTACAAGGCGTTCAGCGTCCAAGTGAAGCTGGATTGTCATTTGCGCACACAGCACGACATCAGAGTCTCCCGAGAGGCCTCTAGCGCTAAAACTGATTTCGTCTGCGACTACTGTTTCAAAGTCTTCGAGAACGAGTACGCTCTCAGCACGCATAAGATATATCACCGTACGATCGGTTACTTCGGCTGCATATATTGTCCTAGAAAGTTCAATACCCAGACTGGATATCGAAAGCATAAGAATCATCATTTTTCGCAGTTGAATGTAGACGAGCCAACCAAATGTGAGCATTGTGACGAAACATTCGTAGCTTTTAGGGAAATGATATACCACATGAGGGATGTACATAACGACGACAAAGAATGGATTATTATGCCAAAGGATTCAATAGAGGAGATGTGCCAAATATGTAATAAGTCTTTCTTCAATCTCCACAGACACATGGACTACCATGAGGAGAATAAATGTAAGAAGTGCAATGAATACTTCTTCTCCACGGCTGATTTCGACAGCCATTTGTGTAGTATTATAAGCGACGATGAGGAGGCTGTCGAAGCCGGGACTGCTGTCAATCAAACCTATGAAGATTGCACTTTCTGCTTTAAGCCTATTACTAAGAAAGATTCCAAGAAAAAACACGATATATTGCACAACGTATCCGGAGCGATATCGTGTAGGTTTTGCCAACTCAAGTTTAAAACTCTCGACGCCTTTAACATTCATGCATTCTCGCACAGGAGTCGGAAATATGACAAGAAGCCTATAAAATGCCGTATTTGTAAGGAACAATTCGTCAAGTACGGTCCCTTTATAAAACACATGAAATTCGTGCACAAATCATTGAAGAAAGTGCATTACCGAGCGCAAGTGAAGCCGGAACGATGCGTGGTTTGCGGCGGCGAGTTTCCTAACCTGCACAATCACTATCGAGCTCATTTGTTAAACCAGTGTCAACAGTGTCGCAAGTACTTCACGTCCACCAGACACTTCAACCGTCACCAGTGCGATAAGGAAGACTCTGATCCTTCTAAAGTATTTACCTGCGATGAAAACCTAAGGATCTTGATCAACACTTACATACCCAAGGACTTGAAGGACGACGAGAAGTATTACGGATACACGGATGATGAGGAAGATGTTGAAAGTCCTTCAGTGGTGAATCATAGACAAGAGATGAATGGGCAGCACATTTTGTCTACGGAGCCTCAGCTGGACGAGGACGAAAGAAACCTGCACATGATGGTGCAGTCGCCCATCATATCGGACGTGTTATCTCTCTACCAAAAGGCCAATGACAGTGACAACCAAGACTCCAAGAGTCAGATCAGCGAATTCGGTGATGTGGTGCAACTTACTGACGACGACGAGATCGACGTCCACGAGGAGATAGTCACAGTGGTAGTCATCGACGATTAA
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTVDNAIQLAEMVMECTKVKIYNGDGLPDKVCSECIQKLSSAYIFKQQCERADEELRRNYVPPPGFSISPPPPNRQSSDSAFSTHTDTSNLKLNDSKVTPVSRSRKRSIESDNASIGSRSRDYSRPTSSKRVQELRQTQKRQRMSPNNSQLDPDYDDFSGDSSYVPETDDSDEHIMQDIIQCNICLKTFKWKKSLKYHMENVHKTSLNNDIPTSTPKKSIENNTEEQEKSSCDKCGKTFKLKIMLKRHAEICELPIEKSPKKELFISLEPIDAVHHKKPTCQYCSAKFKTTDNLEKHLRVVHAATLKPETQGSGSQNTSFTRANNTEKKTTAVPCLYCMKKFSEYQDHNAHFSVCTKNDYRKEFACLLCDKVTINKTSYISHIRGVHFLIPAVPRKSDVNEFECRMCQKKLPTQEKLISHLAAHMSNIDEDGDDVFDRNDSHMEEAVSVQSSQTSQSDLLKCRVCDKEFKYKKACESHEQKHAAEDSEYVKQEPPDKPPNSLLREALEYSSESESSQDETEDNTCDICEKQFSYKRLLIHHKKTKHNQCSGTKRAKITLKDCLVKCLICDEEMKVGTINEHNQKHISANIKPRNVYTCIQCGQKFKSCSNLATHIKLIHRLKQQHVEKKYIGEMADFCEVVVTKAEPLDNVQSHNDSKEVPPSAAPLVNLSGFTCPICTKTMPTLISLKRHVNWHSNVGDSLEKKYECFVCKENFRFQCHFKLHMREHYNDPNLDSEYLTCTICNRKSKNLRAAQAHMNFHKQTRFQTKDYQCSICKRVFQYRKVYLSHMAIHYKKGESGHNTVVGDVTPNNAKASFDGNFTCQLCGKMCDSENSLKHHLIWHKSKTLLYGARHECQICQLQFTNKRHLELHTRSHYEDDNGPFKCTICGKGYTDEDYCKRHMKGHNFDHQSHQKRLEKLRKGKVKCVICSRFYPDLVKLIRHLRRTHPESKMIKEDPDAPPPSYYSCKLCARVFLNEQRLKHHEEAHQRKPNIYKCKFCGKNSMSLKLHNIHIKGHLTTKYTDNPLPCPQCEQRFVLGYALHRHLRDAHGVRETWLAERGAAERAGPLRPLQCSVCHKVLASKGNFERHIDYHNSLRCNYCFEYFSTPRFLEGHLTFNCDKRRLVGDTDPHPKRVKCDICYKAFSVQVKLDCHLRTQHDIRVSREASSAKTDFVCDYCFKVFENEYALSTHKIYHRTIGYFGCIYCPRKFNTQTGYRKHKNHHFSQLNVDEPTKCEHCDETFVAFREMIYHMRDVHNDDKEWIIMPKDSIEEMCQICNKSFFNLHRHMDYHEENKCKKCNEYFFSTADFDSHLCSIISDDEEAVEAGTAVNQTYEDCTFCFKPITKKDSKKKHDILHNVSGAISCRFCQLKFKTLDAFNIHAFSHRSRKYDKKPIKCRICKEQFVKYGPFIKHMKFVHKSLKKVHYRAQVKPERCVVCGGEFPNLHNHYRAHLLNQCQQCRKYFTSTRHFNRHQCDKEDSDPSKVFTCDENLRILINTYIPKDLKDDEKYYGYTDDEEDVESPSVVNHRQEMNGQHILSTEPQLDEDERNLHMMVQSPIISDVLSLYQKANDSDNQDSKSQISEFGDVVQLTDDDEIDVHEEIVTVVVIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00406947;
90% Identity
iTF_00406947;
80% Identity
-