Calb002912.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cyclophora albipunctata
Gene Symbol
-
Assembly
GCA_963082685.1
Location
OY720113.1:10375631-10381572[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 0.018 1.4 10.0 0.9 2 23 201 223 200 223 0.94
2 30 0.0006 0.046 14.6 0.2 2 20 252 270 251 272 0.93
3 30 4e-05 0.003 18.3 1.2 2 23 301 323 301 323 0.97
4 30 0.0097 0.74 10.8 0.2 1 23 385 408 385 408 0.95
5 30 0.009 0.68 10.9 0.2 1 23 423 445 423 445 0.96
6 30 0.00024 0.019 15.9 1.4 2 23 482 503 481 503 0.96
7 30 0.0013 0.095 13.6 4.0 2 23 545 567 545 567 0.97
8 30 0.00059 0.045 14.7 1.9 1 23 617 640 617 640 0.94
9 30 0.0017 0.13 13.2 0.2 1 23 694 716 694 716 0.97
10 30 0.017 1.3 10.1 7.5 1 23 727 749 727 749 0.98
11 30 0.032 2.4 9.2 0.6 2 23 761 782 760 782 0.96
12 30 0.0063 0.48 11.4 1.1 1 23 792 814 792 814 0.98
13 30 0.00087 0.066 14.1 2.5 1 23 842 864 842 864 0.97
14 30 0.00073 0.055 14.4 5.1 1 23 875 897 875 897 0.98
15 30 0.00032 0.024 15.5 2.7 1 23 905 927 905 927 0.98
16 30 0.0028 0.21 12.5 0.3 2 23 947 969 946 969 0.97
17 30 2.1 1.6e+02 3.5 1.2 1 23 987 1009 987 1009 0.86
18 30 1.6 1.2e+02 3.9 2.5 1 23 1016 1038 1016 1038 0.88
19 30 0.026 2 9.5 0.2 2 23 1049 1071 1048 1071 0.94
20 30 0.00031 0.023 15.5 0.8 2 23 1094 1115 1093 1115 0.95
21 30 0.098 7.4 7.7 0.3 2 20 1119 1137 1118 1139 0.93
22 30 0.052 4 8.5 1.4 2 23 1158 1180 1157 1180 0.96
23 30 0.00081 0.062 14.2 0.8 1 23 1195 1217 1195 1217 0.96
24 30 0.26 20 6.3 3.7 5 23 1227 1245 1225 1245 0.94
25 30 0.014 1 10.4 0.8 2 23 1256 1278 1255 1278 0.95
26 30 0.47 36 5.5 3.9 3 23 1296 1313 1295 1313 0.93
27 30 2.8 2.1e+02 3.1 2.6 2 21 1317 1336 1316 1337 0.92
28 30 0.13 9.8 7.3 0.9 2 23 1386 1407 1385 1407 0.94
29 30 0.038 2.9 9.0 0.6 2 23 1418 1440 1417 1440 0.94
30 30 0.16 12 7.0 6.1 2 21 1478 1497 1477 1498 0.95

Sequence Information

Coding Sequence
ATGGCCCTCAAACTTGGAAAATGCAGGCTCTGCCTCAAGCTTGGAGATTTTTACTCCATCTTCACGGTGGACAATGCTATCCAACTAGCGGAGATGGTTATGGAATGTACCAAAGTAAAGATTTACGATGGAGACGGACTGCCGGACAAAGTTTGCTCGGAATGCATACAGAAGTTGAGTAGTGCTTATATATTTAAGCAACAATGTGAAAGGGCAGATGAAGAGCTTAGACGGAACTATGTTCCTCCACCAGGTTTCAGCATCAGCCCTCCGCCACCTAACCGGCAAAGTAGTGACTCAGCATTTTCAACACACACTGACACCTCCAACCTGAAACTAAATGATAGTAAGGTGACTCCAGTTAGTAGAAGTAGGAAAAGAAGCATTGAGAGTGACAATGCATCCATTGGCAGTCGGTCTCGTGACTATAGTAGACCCACCAGCTCGAAACGCGTGCAGGAATTGCGGCAGACTCAAAAGCGCCAGCGTATGTCTCCCAACAACTCACAACTTGACCCTGATTATGATGACTTCAGCGGCGACTCAAGCTATGTGCCAGAAACAGACGATTCCGACGAGCACATCAATCAGGATATCATCCAGTGTAACATATGTCTAAAGACATTCAAATGGAAGAAAAGCCTTAAGTATCACTTGGAGAATGTTCACAAGAAGACCTCCCTGAATAATGATATTCCGACATCTACTCCTAAAAAGAGCATCGAAAATAATACAGAAGAACAAGAAAAGTCAAGTTGTGAAAAATGTGgaaaaacattcaaattaaaGATCATGTTGAAAAGGCATGCGGAAATATGTGAACTTCCTATAGAAAAATCTCCGAAAAAGGAACTTTTTATATCTTTAGAACCAATTGATGCTGTACAGCATAAAAAACCAACATGTCAATACTGTTCAGCCAAGTTTAAAACGACAGATAACTTGCAGAAACATTTGAGAGTAGTTCATGCTGCAACTTTGAAACCAGAAACTCAAGGATCCGGTTCCCAAAACACGTCTTTCACTCGCGCCAATAACACAGAGAAGAAAACAACTGCAGTGCCATGCCTTTACTGTATGAAGAAGTTTTCAGAATATCAAGATCATAATGCACATTTCAGCGTGTGTACTAAAAATGACTACCGCAAAGAGTTTGCTTGTTTGTTGTGTGACAAAGTTACGATGAATAAAACGTCGTATATAAGCCACATTCGTGGTGTACACTTTCTGATTTCTGCAGTTCCTAGAAAATCGGATGTTAACGAATTTGAATGTAGGATGTGTCAAAAGAAACTCCCAACACAGGAGAAGTTGATCAGTCACCTAGCGGCTCACATGTCGAACATTGACGAAGATGGCGACGACGTCTTCGACAGAAATGACAGCCACATGGAAGAGGCAGTATCGGTGCAAAGCTCGCAGACATCGCAGAGTGACTTACTCAAGTGCAGAGTCTGTGACAAAGAgttcaaatataaaaaggCGCTCGAATCTCATGAACAGAAGCACGCCGCAGAAGATTCGGAATATGTGAAGCAAGAACCTCCTGACAAACCGCCCAATAGTTTGCTCAGAGAGGCACTCGAAAATAGTTCCGAATCAGAATCTAGTCAAGATGAAACTGAGGATAACACATGTGATATTTGTGAAAAGCAGTTCTCTTACAAGCGTCTCTTAATCCATCATAAGAAGACGAAACATAATCAATGTTCTGGGATTAAAAGGGCAAAAATAACACTCAAAGATTGCCTCGTGAAGTGTCTCATTTGTGACGAGGAGATGAAAGTGGGCACTATCAATGAACACAACCAGAAGCATATTTCGGCGAATATTAAGCCCAGAAACGTGTATACTTGCATCCAGTGCGGACAGAAATTTAAGAGCTGCAGCAATTTAGCTACTCATATTAAATTGATACACAGatTGAAGCAGCAGCATGTGGAAAAAAAGTATATCGGCGAGATGGCGGATTTTTGTGAAGTCGTTGTGACGAAGGCGGAACCCCTGGACAATTTCCAGTCTCACAACGACTCCAAAGAGGTTCCGCCGTCCGCGGCGCCGCTCGTGAACCTGTCCGGGTTCACCTGCCCCATCTGCACTAAGACGATGCCCACGCTCATATCACTCAAGAGGCACGTCAACTGGCACTCCAATGTAGGAGACAATTTAGAAAAGAAATACGAGTGCTTTGTCTGTAAAGAGAATTTCCGGTTTCAATGTCACTTCAAGCTCCACATGCGGGAACATTACAATGATCCGAATCTAGATTCCGAACACCTGACATGCTCCATCTGCAACCGCAAGAGTAAAAACCTCCGCGCTGCGCAAGCGCACATGAACTTCCACAAACAGACTCGCTTCCAGACTAAAGACTACCAGTGCTCGATCTGCAAGCGAGTGTTCCAGTTCAGGAAGGTGTACCTCTCCCACATGGCCATCCACTACAAGAAGGGTGAGTCCGGACATAACACTGTCGTAGGTGACGTCATACCTAACAACGCGAAGGCTTCCTTCGACGGTAATTTCACATGTCAGCTCTGTGGAAAGGTGTGCGACTCCGAGAACTCTCTCAAACATCATCTCATATGGCACAAGTCCAAAACTCTGCTCTATGGCGCTCGACACGAGTGCCAAATATGTCAACTGCAGTTCACGAACAAGAGGCACCTCGAACTGCACACGCGATCTCACTACGAGGATGACAACGGACCGTTCAAATGTACCATCTGCGGGAAAGGTTACACAGATGAAGACTACTGTAAGCGACATATGAAGGGACACAACTTCGACCACCAATCTCACCAGAAAAGGTTGGAGAAGCTCAGGAAGGGGAAAGTCAAATGTGTGATATGTTCACGATTCTACCCGGATCTGGTGAAGCTGATTCGGCATCTGCGACGGACGCATCCCGAAAGCAAAATGATAAAGGAGGACCCCGACGCGCCGCCGCCCAGCTACTACTCGTGCAAGCTGTGCGCGCGCGTGTTCCTCAACGAGCAGCGGCTCAAGCACCACGAGGAGGCCCACCAGCGGAAACCGAACATATACAAGTGCAAGTTCTGCGGCAAGAACAGCATGTCCCTGAAGCTGCACAACATACACATCAAGGGGCACCTGACCACCAAGTACACGGACAGCCCGCTGCCGTGCCCGCAGTGCGAGCAGCGCTTCGTGCTGGGCTACGCGCTGCACCGGCACCTGCGCGACGCGCACGGCGTGCGGGAGACGTGGCTGGCGGAGCGCGGCGCGGCCGAGCGCGCGGGCCCGCTGCGCCCGCTGCAGTGCTCCGTGTGCCACAAGGTGCTCGCCTCCAAGGGCAACTTCGAGCGCCACATCGACTACCACAACTCGCTGCGCTGCAACTACTGCTTCGAGTACTTCAGCACGCCGCGCTTCTTGGAGGGCCATCTCATCTTCAACTGCGACAAGAGGCGGTTGGTGGGCGACACCGATTCTCACCCGAAAAGGGTCAAGTGCGATATTTGCTACAAGGCGTTCAGCGTCCAAGTGAAGCTGGATTGTCATTTGCGCACGCAGCACGACATCAGAGTCTCCCGAGAGGCCTCTAGCGCTAAAACTGATTTCGTCTGCGACTACTGTTTCAAGGTCTTCGAGAACGAGTACGCTCTCAGCACGCATAAGATATATCACCGTACGATCGGTTACTTCGGCTGCATATATTGTCCTAGAAAGTTCAATACCCAGACTGGATATCGAAAGCATAAGAATCATCATTTTTCGCAGTTGAATGTAGACGAGCCAACCAAATGTGAGCATTGTGACGAAACATTCGTAGCTTTTAGGGAAATGATATACCACATGAGGGATGTACATAACGACGACAAAGAATGGATTATTATGCCAAAGGATTCTATAGAGGAGATGTGccaaatatgtaataagtcTTTCTTCAATCTCCACAGACACATGGACTACCATGAGGAGAATAAATGTAAGAAGTGCAATGAATACTTCTTCTCCACGGCTGATTTCGACAGCCATTTGTGTAGTATTATAAGCGACGATGAGGAGGCTGTCGAAGCCGGCACTGCTGTCAATCAAACCTATGAAGATTGCACTTTCTGCTTCAAGCCTATTACTAAGAAAGATTCCAAGAAAAAACACGACATATTGCACAACGTATCCGGAGCGATATCGTGTAGGTTTTGCCAACTCAAGTTTAAAACTCTGGACGCCTTTAACATTCATGCATTCTCGCACAGGAGTCGGAAATATGACAAGAAGCCGATAAAATGTCGTATTTGTAAGGAACAATTCGTGAAGTACGGTCCCTTTATAAAACACATGAAATTCGTGCACAAATCATTGAAGAAAGTGCATTACCGAGCGCAAGTGAAGCCGGAACGATGCGTGGTTTGCGGCGGCGAGTTTCCTAACCTGCACAATCACTATCGAGCTCATTTGCTAAACCAGTGTCAACAGTGTCGCAAGTACTTCACGTCTACCAGACACTTCAACCGTCATCAGTGCGATAAGGAAGACTCGGATCCTTCTAAAGTATTTACCTCCGATGAAAACCTAAGGATTTTGATCAACACTTACATACCCAAGGACTTGAAGGACGACGAGAAGTATTACGGTTACACGGATGATGAGGAAGATGTTGAAAGTCCTTCAGTGGTGGATCATAGACAAGAGATGAATGGGCAGCGCACTTTGTCTGCGGAACCTCAGCTGGACGAGGACGAAAGAAACCTACACATGATGGTGCAGTCGCCCATCATATCGGACGTGTTATCTCTCTACCAAAAGGCCAACGACAGTGACAACCAAGACTCCAAGAGCCAGATCAGCGAATTCGGTGATGTGGTGCAACTTACTGACGACGACGAGATCGACGTCCACGAGAACGAGATAGTCACAGTGGTAGTCATCGACGATTAA
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTVDNAIQLAEMVMECTKVKIYDGDGLPDKVCSECIQKLSSAYIFKQQCERADEELRRNYVPPPGFSISPPPPNRQSSDSAFSTHTDTSNLKLNDSKVTPVSRSRKRSIESDNASIGSRSRDYSRPTSSKRVQELRQTQKRQRMSPNNSQLDPDYDDFSGDSSYVPETDDSDEHINQDIIQCNICLKTFKWKKSLKYHLENVHKKTSLNNDIPTSTPKKSIENNTEEQEKSSCEKCGKTFKLKIMLKRHAEICELPIEKSPKKELFISLEPIDAVQHKKPTCQYCSAKFKTTDNLQKHLRVVHAATLKPETQGSGSQNTSFTRANNTEKKTTAVPCLYCMKKFSEYQDHNAHFSVCTKNDYRKEFACLLCDKVTMNKTSYISHIRGVHFLISAVPRKSDVNEFECRMCQKKLPTQEKLISHLAAHMSNIDEDGDDVFDRNDSHMEEAVSVQSSQTSQSDLLKCRVCDKEFKYKKALESHEQKHAAEDSEYVKQEPPDKPPNSLLREALENSSESESSQDETEDNTCDICEKQFSYKRLLIHHKKTKHNQCSGIKRAKITLKDCLVKCLICDEEMKVGTINEHNQKHISANIKPRNVYTCIQCGQKFKSCSNLATHIKLIHRLKQQHVEKKYIGEMADFCEVVVTKAEPLDNFQSHNDSKEVPPSAAPLVNLSGFTCPICTKTMPTLISLKRHVNWHSNVGDNLEKKYECFVCKENFRFQCHFKLHMREHYNDPNLDSEHLTCSICNRKSKNLRAAQAHMNFHKQTRFQTKDYQCSICKRVFQFRKVYLSHMAIHYKKGESGHNTVVGDVIPNNAKASFDGNFTCQLCGKVCDSENSLKHHLIWHKSKTLLYGARHECQICQLQFTNKRHLELHTRSHYEDDNGPFKCTICGKGYTDEDYCKRHMKGHNFDHQSHQKRLEKLRKGKVKCVICSRFYPDLVKLIRHLRRTHPESKMIKEDPDAPPPSYYSCKLCARVFLNEQRLKHHEEAHQRKPNIYKCKFCGKNSMSLKLHNIHIKGHLTTKYTDSPLPCPQCEQRFVLGYALHRHLRDAHGVRETWLAERGAAERAGPLRPLQCSVCHKVLASKGNFERHIDYHNSLRCNYCFEYFSTPRFLEGHLIFNCDKRRLVGDTDSHPKRVKCDICYKAFSVQVKLDCHLRTQHDIRVSREASSAKTDFVCDYCFKVFENEYALSTHKIYHRTIGYFGCIYCPRKFNTQTGYRKHKNHHFSQLNVDEPTKCEHCDETFVAFREMIYHMRDVHNDDKEWIIMPKDSIEEMCQICNKSFFNLHRHMDYHEENKCKKCNEYFFSTADFDSHLCSIISDDEEAVEAGTAVNQTYEDCTFCFKPITKKDSKKKHDILHNVSGAISCRFCQLKFKTLDAFNIHAFSHRSRKYDKKPIKCRICKEQFVKYGPFIKHMKFVHKSLKKVHYRAQVKPERCVVCGGEFPNLHNHYRAHLLNQCQQCRKYFTSTRHFNRHQCDKEDSDPSKVFTSDENLRILINTYIPKDLKDDEKYYGYTDDEEDVESPSVVDHRQEMNGQRTLSAEPQLDEDERNLHMMVQSPIISDVLSLYQKANDSDNQDSKSQISEFGDVVQLTDDDEIDVHENEIVTVVVIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00407784;
90% Identity
iTF_00407784;
80% Identity
-