Cpun017053.1
Basic Information
- Insect
- Cyclophora punctaria
- Gene Symbol
- -
- Assembly
- GCA_951394245.1
- Location
- OX596189.1:716256-717329[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.2e-09 4.9e-05 23.2 4.9 49 192 73 215 46 281 0.79
Sequence Information
- Coding Sequence
- atgtcTTCATCTACGAAATGCGGAGCTTGTAACAAGCCGATTACCAATGCTAAAGAAACAATTAAATGCACAACTTGCATCCGATGTTATGATTTGGATTGTGTAGGTATTAATCCAAAGCGACTGAACACCATGGTCAAAGACAAATCTAGTTGGAAATGCCCGGCATGTCGCAGCATGGAGCCAAAAACCGGGAATACCAACACCCCAGTTAGGTCGGAAGCCCAGCATATTCAGGACATCGTACACGTCACTACAAGAAATGCGAAACTCTCAAGGCGTAAATCATCTGACGACAATCCTAATATCGAGGCAAATATATCATCTGACACAATCCGCACTATAATTAGAGAAGAGCTCGCACATACCCTAAATGCGTCAATAAAATCTCTGGTTTCTGATAAATTAAACTTGCTGAATGAGAAGATGTCATCGTTTGAAGATGCTCTTAACTTCATGAACGCTGCATACGAGGAAGTAAAAAAGAGTCTCGAAgagaaaacaaaaattatcGACACTCTAAAGAAAACTAACGACTCACTTACTTCTACAGTAACAGAGCTTGGAAATCGACTTAATGTTATGGAGCAATACTTAAGAGAAACAAATATAGAAGTTACAGGTGTACCGGAAGACAAAGAGGAAAATATTCCCACTCTGGTGGTCCAGCTAGCAAATGTTGTTAACTGTCCCTTGACTGCGGAAGACATAACTCACTGTAGTCGTGTGGCTAGATTGGATAAACTTAATAGTCGCCCCAGAGCCATAATTGTCAAGCTTAAGAGTCGTATCTTACGCAACAATCTATTATCAGCTACAATCAAATTCAATAAGCGCGAAACCACTAAATTGAATACGAAACATCTTGGCTATGGGTGCTCACCGGCACCGGTATACATATCAGAGCATCTTAGTCCTGCAAACAAGCATCTTTTTGCGGCGACAAGACGAAAGATAAAAGAAACCGGCTACAAATATGCATGGATTAAGGATGGTCGTATATTCGCCAGAAAAGATGAAAAATGTCCAGCCCTACATATCCGTACTCCAGAATCTCTAGAATTAATCATCTaa
- Protein Sequence
- MSSSTKCGACNKPITNAKETIKCTTCIRCYDLDCVGINPKRLNTMVKDKSSWKCPACRSMEPKTGNTNTPVRSEAQHIQDIVHVTTRNAKLSRRKSSDDNPNIEANISSDTIRTIIREELAHTLNASIKSLVSDKLNLLNEKMSSFEDALNFMNAAYEEVKKSLEEKTKIIDTLKKTNDSLTSTVTELGNRLNVMEQYLRETNIEVTGVPEDKEENIPTLVVQLANVVNCPLTAEDITHCSRVARLDKLNSRPRAIIVKLKSRILRNNLLSATIKFNKRETTKLNTKHLGYGCSPAPVYISEHLSPANKHLFAATRRKIKETGYKYAWIKDGRIFARKDEKCPALHIRTPESLELII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00406771;
- 90% Identity
- iTF_00406771;
- 80% Identity
- iTF_00407604;