Cpun017189.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cyclophora punctaria
Gene Symbol
-
Assembly
GCA_951394245.1
Location
OX596189.1:2466346-2468256[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3e-16 1.4e-13 50.7 0.1 1 44 17 60 17 60 0.95

Sequence Information

Coding Sequence
ATGCCAAATAAGTATCAGAGAAAAGCCATAGCCACCCGTGGTTGTTGGAGTGAAGATTCACTAAAAGCTGCTATAAATTCCATAAAAAATGGAGAAATGTCGGTGTATAGAGCAGCAGTTATCTACGGCATACCTCGTAAAACACTTGAAAGAAGGTACAAGACTAATAATGACAAAAAGGGACCAATGGGACCTACCTCTATGCTTGGAGaccaaaatgaaaaaaaactgGCTGATCATATTAAAACGATGCAAGGAACAGGATTCCCTTTGACAATTAGTGATGTAAGAGTGATTGCCTTTCAGTTTGCTGAGCAATTAAACATCAAacataaattcaataaatcaaatgaaaagGCTGGCTATGATTGGCTGCAGATGTTTTTACGCAGACATCCAGATATTGTTTTGAGAAAGTCTGAAGGAGTTTCAATAGCCCGTTGTCAAGGTATGAACAGAAACGAGGTCAGTGCTTACTTTGATTTGTTAGAAAAAAATCTCATAGATAATGACTTGATGACAAAGCCCAATTGTGTGTTCAATATGGATGAATCAGGTCTACAGCTAAACAATCGCCCTGGACATGTACTCGCAGCAAAGGGTACTAAAGCTGTATCCACGACAACGTCAACTGAAAAGGGTGAAACCATTACAATCATAGCATGTTGCAATGCTGAAGGCACTTTTCTACCACCGGCGTGTATCATGAAGGGTATGAATAAGAAAAGCGAATATGAAGATGGAATGCCTCCAGGATCCCGTATTTTTATGTCCAAAAAATCCGCTTATATCACATCAGCAATATTTTTGGAATGGctcaaaatacattttatgccTAGAAAGCCGCCAGGAAAAGTTTTACTTTTGCTTGATGGTCACTCCACGCACTGCAATTCAGTAGAAATGCTTGAATATGCCAATGAAAATGAAATCATTCTTCTGTCTATGCCGAGCCACACATCTCATTATTTACAGCCCCTTGATAGGGCAGTGTTTAAATCGCTGAAATGTCACTTTTATGAACAATGCCGGCTATGGATAAACCAAAATCCGGGTCGCCGAATCACAAGACTCTCATTTGGGTCATTATTGAATAAAGCATGGGGCAAGGCAGCTACAGCTGAAAACGCCATTTCTGGATTTAGAGCATGTGGAGTGTTCCCATTTAATCCAACAGCAATACCTGATTATGCATTTATCAGTGACCGACAACCAGATGAAGTGACTAACATTCATTCAAGTTTACCTGTTTCTACAAGTGTAACGCCCATCACTCCACCAGATTTCAGAGAAACAGGTGAAAATGAACCATTAGCAATACCAGGAACATCTGCTGATCAATGGACGCCTTCTCGAATTTTAAAAGACCTATCCCCTATTCCTCAAAAAATAATGGAAGTTCGTAAACGTAGCAAACAGATTGGGAAACTTTTGACTTCAGAGGAGCATATAGCATTAAGAAAGGATAAAGAAAACGAAAAGACTTTGAAAGAGCATAGGCGTAAAgttaaacaagaaaaaaaaatggttaaaCCCAAAGATAAGAAGACTGATAcaaataagaatagaaaacGGAAAGCTATAAGGCGTATTAGCGAAAGCAGTTCTGATCTCAGTGAACCAGTATTGTGTGATACATCTGACGAAGAAGATAAAGAAAACGAAGCAGATAACTGCGCTGGATGCGgagaaaattattataagacTCGTCTTGTGGAAGAATGGCTCCAGTGCCTTATTTGTGACAGGTGGGTACATGAAAACTGTACAGAGTTTGATGATATGTGCTCCAAATGTGGacagaagaagaaaaaagaaGCTAAACAAGCCGAATTTCAGGGCAAGGGAAAGGGAAAAGGGAAGTCAAGTACTGGTCATCTATCCCGTATAGCTACGGCCAACTCACCCTGA
Protein Sequence
MPNKYQRKAIATRGCWSEDSLKAAINSIKNGEMSVYRAAVIYGIPRKTLERRYKTNNDKKGPMGPTSMLGDQNEKKLADHIKTMQGTGFPLTISDVRVIAFQFAEQLNIKHKFNKSNEKAGYDWLQMFLRRHPDIVLRKSEGVSIARCQGMNRNEVSAYFDLLEKNLIDNDLMTKPNCVFNMDESGLQLNNRPGHVLAAKGTKAVSTTTSTEKGETITIIACCNAEGTFLPPACIMKGMNKKSEYEDGMPPGSRIFMSKKSAYITSAIFLEWLKIHFMPRKPPGKVLLLLDGHSTHCNSVEMLEYANENEIILLSMPSHTSHYLQPLDRAVFKSLKCHFYEQCRLWINQNPGRRITRLSFGSLLNKAWGKAATAENAISGFRACGVFPFNPTAIPDYAFISDRQPDEVTNIHSSLPVSTSVTPITPPDFRETGENEPLAIPGTSADQWTPSRILKDLSPIPQKIMEVRKRSKQIGKLLTSEEHIALRKDKENEKTLKEHRRKVKQEKKMVKPKDKKTDTNKNRKRKAIRRISESSSDLSEPVLCDTSDEEDKENEADNCAGCGENYYKTRLVEEWLQCLICDRWVHENCTEFDDMCSKCGQKKKKEAKQAEFQGKGKGKGKSSTGHLSRIATANSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00406636;
90% Identity
iTF_01264325;
80% Identity
iTF_00407492;