Basic Information

Insect: Cyclophora albipunctata
Gene Symbol: -
Assembly: GCA_963082685.1
Location: OY720133.1:1991466-1999053[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3.3e-05 0.0025 18.6 6.9 1 23 45 67 45 67 0.98

2 13 1.8e-06 0.00014 22.6 0.2 3 23 81 101 80 101 0.98

3 13 3.9e-05 0.003 18.4 2.1 2 23 110 131 110 131 0.98

4 13 0.00024 0.019 15.9 2.1 1 23 137 159 137 159 0.98

5 13 7e-06 0.00053 20.7 1.3 1 23 165 187 165 187 0.97

6 13 1.3e-05 0.00098 19.9 8.4 2 23 194 215 193 215 0.97

7 13 5.4e-06 0.00041 21.1 0.4 1 23 221 243 221 243 0.98

8 13 9.9e-06 0.00075 20.2 1.7 1 23 249 271 249 271 0.99

9 13 5.8e-05 0.0044 17.8 0.5 1 23 277 299 277 299 0.98

10 13 0.00082 0.062 14.2 1.6 1 23 305 327 305 327 0.97

11 13 4.7e-06 0.00036 21.3 0.5 1 23 333 355 333 355 0.98

12 13 7.3e-05 0.0055 17.5 6.0 1 23 361 383 361 383 0.97

13 13 0.00012 0.009 16.9 2.7 1 23 446 468 446 468 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3.3e-05	0.0025	18.6	6.9	1	23	45	67	45	67	0.98
2	13	1.8e-06	0.00014	22.6	0.2	3	23	81	101	80	101	0.98
3	13	3.9e-05	0.003	18.4	2.1	2	23	110	131	110	131	0.98
4	13	0.00024	0.019	15.9	2.1	1	23	137	159	137	159	0.98
5	13	7e-06	0.00053	20.7	1.3	1	23	165	187	165	187	0.97
6	13	1.3e-05	0.00098	19.9	8.4	2	23	194	215	193	215	0.97
7	13	5.4e-06	0.00041	21.1	0.4	1	23	221	243	221	243	0.98
8	13	9.9e-06	0.00075	20.2	1.7	1	23	249	271	249	271	0.99
9	13	5.8e-05	0.0044	17.8	0.5	1	23	277	299	277	299	0.98
10	13	0.00082	0.062	14.2	1.6	1	23	305	327	305	327	0.97
11	13	4.7e-06	0.00036	21.3	0.5	1	23	333	355	333	355	0.98
12	13	7.3e-05	0.0055	17.5	6.0	1	23	361	383	361	383	0.97
13	13	0.00012	0.009	16.9	2.7	1	23	446	468	446	468	0.99

Sequence Information

Coding Sequence: ATGGTACAGGTAGTAGTACCTGAAGTGGAAGCTCCGAAACCGGCTAACAAGGACGAAGGTCTGAACTCTGACGAAGAGAACTACCTTCAAATGGTGGTGTTCCAAGCAACGTCGTCCGTGTCTCCGGGGAGACATGTGTGCAACCTCTGCCACAAGGAGTTCAAACACGCGAGGTGGCTCAAACAGCATATGAGGTCACATACTAACTGGATCAAAGCGAATTGTAAAAAGCCGCCGATGTGCCCTATCTGTGAACGGACTTTTAAGGGTCCAGGAATGCTCAAAATGCACATGCGGACCCATGAGCAGAGGCCTCCCAAACAGCCCACATGTTCCGTCTGTCAACGGACCTTCCCCACCAAGACGCTCCTCTACCGCCACAGGCAAACACACTTCGAACAGAAGACGCACCAGTGCACAGTGTGTGAGAAGAGGTTCTTTAGCGGCTACGCTTTAAGGTCGCATATGGCTCGGCACAGAGGCGAGAGGCCGTACATCTGCTCAAATTGCAACAAGAGCTTCTATAATCCTACTGATTTGAAGGTTCATTTCCGACTGCACACGGGCGAGAAACCCTTGAAATGCAGCGAATGCAACAAGACGTTCCGGCGTCACTCTACGCTCTGCCAACATATGAAGAAACACCGCGGTATACGGAACCATGTGTGCAGCGTCTGTGGCAAAGGATTCTACGAGGTCTCCAAACTGAATGCTCATATGAGGGTACATACAGGCGAACGTCCATACGAGTGTCAGTTTTGCTCGCGCAAGTTCGCCCAACAGTCGGCGCTGATCTACCACCGGCGCACGCACACCGGCGAGAAGCCTTACTCGTGCAAAGTGTGTCCCGCCAAGTTCACCACGTCCTCCGCCAGGAATAACCATATGGTCACGCATACTGGGAACAAAAAGTTCGTGTGCTCCGTGTGCTACAAGGGCTGCAACTCGCGCTCGGAGCTGCGCGTGCACGCGTCGCGGCACACGGGCGAGAAGCTGTTCGAGTGCGACGTGTGCGGGCAGCGGTTCAGCTCCGCCTCCTACTTCGCCGTGCACCGCCGCTACCACGCCGGCGAGCGCCGCCACCACTGCAGCGTCTGCGGCAAGAGTTACATGGAATCTTCTTCATTTAAGAAACATATGAAGACACACGAGCCCAAGTCAGAAGACGGAGAACAAAGTACGGAAGATAATGACGCCAAGAGTGAAGGTCACGAGACGCAAGGGGACGAGCAAGATGCGCAGGCGCAGGAAATCCCCGTCCAAGCTCAGAACCCGACACATCAAGTGCCACAAGAGCAGCCCGCGCCCACGCCGCCGCCCGAGAACCAGAAGCGATACAAGTGTGGCATCTGCGTCAAGACATACATGTACCTGCACAGCTTGAAGAAACACATGCTCATGCATATACCACAACAGCAACAACAGCAGCAACAGCAACAACAGCAACAACAacagcagcagcagcagcagcaacagcaacaacaacagcagcagcagcagcaacagcaacaacaacagcaacaacaacaacaagtCCAACAACAAGTGCAGCAACAGCAACAAGTACAATCCCCGGTCCAAACACAAGTGCAAGTGACTCATCAACACATCCAACAGCAACAACTGCAGCAGCTGCAACAACATCAACTGCAACAACAAGTGCTGCAGGTCGGAGGGGTGCAGCAACTGACTGTGCCTATACAGCAGCTGTCGCAGGGAATTACTGTTAATGGAGTGCAGCCCGGCCAGCACACGTACCCGGTGATATCGTCGGTGCAGTCCCTCCAGCTGCAACAAACACAACAGGTTAACACGCAACCGCAGCAGCTGCATGTCCAGACGATTCAGCTGCACCCGCAGCAGCAGCACCAACCCATACAGATACATGCCGTCGGAGTGCAACAAGTCCAACAACAacagctgcacgttgctacATCCAGTTGTCAAACCATGCTGCCTAACATTTTGCAGCTGCAGCCCGCCACCGTGGTGTCGGGGCTGAGCCAGCAGGAGCTGGGCGGCGTCGCGCACCGCATCATCCTGCAGCCCCAGGGCTCCGCGCCGCACCCCGCCGTCTACACCATACACCACTGA
Protein Sequence: MVQVVVPEVEAPKPANKDEGLNSDEENYLQMVVFQATSSVSPGRHVCNLCHKEFKHARWLKQHMRSHTNWIKANCKKPPMCPICERTFKGPGMLKMHMRTHEQRPPKQPTCSVCQRTFPTKTLLYRHRQTHFEQKTHQCTVCEKRFFSGYALRSHMARHRGERPYICSNCNKSFYNPTDLKVHFRLHTGEKPLKCSECNKTFRRHSTLCQHMKKHRGIRNHVCSVCGKGFYEVSKLNAHMRVHTGERPYECQFCSRKFAQQSALIYHRRTHTGEKPYSCKVCPAKFTTSSARNNHMVTHTGNKKFVCSVCYKGCNSRSELRVHASRHTGEKLFECDVCGQRFSSASYFAVHRRYHAGERRHHCSVCGKSYMESSSFKKHMKTHEPKSEDGEQSTEDNDAKSEGHETQGDEQDAQAQEIPVQAQNPTHQVPQEQPAPTPPPENQKRYKCGICVKTYMYLHSLKKHMLMHIPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQQVQQQQQVQSPVQTQVQVTHQHIQQQQLQQLQQHQLQQQVLQVGGVQQLTVPIQQLSQGITVNGVQPGQHTYPVISSVQSLQLQQTQQVNTQPQQLHVQTIQLHPQQQHQPIQIHAVGVQQVQQQQLHVATSSCQTMLPNILQLQPATVVSGLSQQELGGVAHRIILQPQGSAPHPAVYTIHH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00407771; iTF_01444108;
90% Identity: iTF_00407771;
80% Identity: -