Calb000605.1
Basic Information
- Insect
- Cyclophora albipunctata
- Gene Symbol
- bab1
- Assembly
- GCA_963082685.1
- Location
- OY720111.1:6029158-6031006[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-17 3.1e-14 52.8 0.0 1 43 31 74 31 76 0.95 2 2 5.5 2e+03 -1.0 1.1 6 15 166 175 162 179 0.83
Sequence Information
- Coding Sequence
- ATGCAGCATCTTTGGCAGCAGTGTTGGAACACCAATCAGAACATGGTGCAGAATCTACGACTGCGAGAAAGAGGCCCTTTGAAGTCCTGGAGACCAGAGACAATGGCTGAAGCCATCTTCTCCGTGCTGAAGGAAGGACTGTCGCTGTCCCAAGCGGCTAGGAAGTTCGACATACCATACCCTACATTCGTGCTCTACGCCAATCGAGTCCACAACATGCTTGGACCGAGCGCTGACGGCGGAGCAGACTTGAGGCCGAAGGGGCGCGGCCGGCCGCAGAGGATTCTACTGGGCGTGTGGCCCGACGACCACATCCGCGGGGTGATCAGGGCCGTGGTGTTCCGCGAGAACCACGCGCAGCACCCGCCGCACCATCTGCGCGAAATCGATATGCCCATCTACCCGGCGATCACGGAGGGCCCGTCGCCTCAAAATACGGTTGGAGGAAACGGGTGCGGTGGCCGCGAGGGGAGGCTGTCCCCGAAcgcggcggccgcggcggCTGTGGCCGCGGTGGCGCACGGGCTGCGCCAGCAGATGTGCAACATGGTGGTGGCAGCGCAGCGGCCGGGCGAGCAGGGCGCGCAAGTGGCGCTACCGCCGTTGCCGCTGCACTCACCGCGGCTGCCCTCACCTATCTCCACAGGGCTCGAGTCACCGCTGACGTCGCCGCCGCCTCCGGGGCTGGCCATCGCCGCTTCGACTCCGTTCCGGCCGTTCGCGTCGCCGCCGCACTACGACACGGGTGAGATGCGCCCGCCGCGGACGCCGCTCAACCGGAACGGACAGGGCGCCTCGCCGGTCGAGGCGGAGAACCCGCCGCTCAACGACCGCGCGCGGCTCGACATCTGA
- Protein Sequence
- MQHLWQQCWNTNQNMVQNLRLRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDDHIRGVIRAVVFRENHAQHPPHHLREIDMPIYPAITEGPSPQNTVGGNGCGGREGRLSPNAAAAAAVAAVAHGLRQQMCNMVVAAQRPGEQGAQVALPPLPLHSPRLPSPISTGLESPLTSPPPPGLAIAASTPFRPFASPPHYDTGEMRPPRTPLNRNGQGASPVEAENPPLNDRARLDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00407489; iTF_01443752;
- 90% Identity
- iTF_00407489; iTF_01443752;
- 80% Identity
- iTF_00407489;