Ctho000547.1
Basic Information
- Insect
- Cyclargus thomasi
- Gene Symbol
- PAXBP1
- Assembly
- GCA_026546445.1
- Location
- JAOTAV010019425.1:28444-39897[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3e-17 9.4e-13 48.7 0.2 3 190 504 667 502 676 0.77 2 2 0.72 8.2e+03 -3.6 0.0 33 65 765 792 761 795 0.67
Sequence Information
- Coding Sequence
- ATGTCGCTCTTTCGTAAGCCAAAGAAAATACAGAGACGTGTATTTTGTGGCGATGATGACGACGACGGAGACCCTGAACCGCCACCGCCGCCGATTATTAGCCAAAATAAGAAAGAAAATAAACCTGTTAAAAGCATTCAGTTACTCAGCTTCGCGGACGAAGAGGAGGACGGTGAGGTGTTCAAAGTTAAGAAGTCATCACAGAGTAAGAAATTGGCAAAACGCAGGGAAAAGGAGAAGCATCGAGGTCCTGATAATGATGATACTAACAAATTTGACAGTAATGGTGACCAGGAAAGGCAAGAAGAGAAAATTACAGAGAAACCTAAGAAGAAGGTGACTCTGGAGGGGCTGATCCTGTCTGGGCGGGAGGCTCTGGCCGCCGACGCTGAGGGGGACCTGTCGTCCAGCGAGAACGAGGAAGACAGTAGGGGTTTCCACCGGTACCGCGCGGAGAATGTCCGCGCTGCGCTGGCGGTTGCCCCCGGACACATTCCCGACGCGGCGCTCATCCACGCCGCGCGCAAGACGCGACAGCAGGCTCGTGAGCTGGGCGACTTCGTGCCGATAACGTCTGACAAGTCCCCTGGGCCGGGCTCCCGTCTCCGGCGAGATGATGACATGGACGACGATGATGATGAAGACGAGGGCAGGATCGAGGTGCGCGGCTTGGAACTACCGAATGACAAACCTAAACGGACGACAGCAGCGGCGGCGTCCGACGAAGACATGAACAGCGAGGCGGACGAGTGGGAGGAGCAACAGATGCAGAAAGCTGTACCCGCCATAGCTGATATCACTGCCGCCCTCGGTAGCAGCGAGTTGAACCCGTTCGCGGTCCCGCCGCCGCCGGCTCGTGCGGACGCGCCGCAGTTGCGCACGCTGCTGGCGCCCGGCCGCGCCCCGCCCGCCACCGCACACGATCTCGTCGATGCGCTGCAGGAGCGGTTATCGGAGCTAAGCGCTAGTCGCGGCTCGGCGTTGGAGCGTCGCGAACGCTGCCGCTCGCGGCTGGTGGGCGCGGCACGCGTTCGGGAGTCGCGAGCGGCGCGCGCGCCCGCACTCGACGCCGCATACCGCCGCGCGCAGGCCGTACGCGGGTACGTCACAGACCTGATAGAGTGTCTCGACGAGAAGATGCCGCAGCTGGAGGCACTAGAGAGTCGCGCTCTAGCGCTGCACCGCCGCCGCTGCTCGTACCTGGTGGAGCGGCGCCGCGCCGACGTGCGGGACCAGGCGCACGACGTGCTCGCGCTCGCAGGTCGCGGCGGAGTCCCTCGCGCGCCAGAGGATCCAGAGGCGGCACGACGGGCGGCGGAGCGCGAGGGGCGGCGTCGCGCGCGTCGACTGAAGCGCGAGGCGGCGGGCGCGGCGCACCGCGACGGCGACTCGAGCGACGACGAACTTCCGCCCGCTACTGCGCATGCGCTTAACACTGCTGCAGAGGAGATACGTCGTGAGGCGGGCGCGTTATTCGCGGACGCGCTGCCGGCATGGCGTGGCGTGCGCGGCGTGTGCGCACGTCTGGCACGCTGGCGGCGGCGCGCACGTACGCTGTACGCCGACGCCTACCTCGCCGACAGCCTGCCGCAGCTGCTGGCGCCATATGTCAGACATCAGTTGATCCTGTGGAATCCGCTGGCTGATGAAGACAACGAGGACTATGAGAAAATGGACTGGTACAAATGTCTGATGATGTACGGCGTGCGATCGGACAGAGTGTCGAGCGACTCCGACCAGTCGTCCGACGAGGAGACGACGTCGGTGTCGGAGGAGGCCGTCCGATCTGACCCCGACCTGATGCTGGTGCCCACCATCGTAGATAAGGTTGTCCTACCCAAGGTTACCGAGCTAGTAGAGCAGGCGTGGGACCCGGTTTGCGTACGAGCGTGCGTGCGCCTGCGCAGCATCCTGTGTCGAGCGCTGGAGCTGCCGCGTGCGAGCTGCCTGCCGCGCCTCGCCGCTGCCGCGCACGCGCGTCTCGCTGCCGCTATCGCCGCCGACGTTTTCCTACCCGCGCTGCCGCCACACATTGTGGAGGGTGTGGGCGGCGTGTTCTGGCGTCGATGTCTCGGCGGTGGCGTGCGGCTGCTGCGTGCGACGCTCGCGTTATGCGCACCGCCGCCGCCGCTACACGCCGACCCGCTGGCGCTTAAACTTATTGACACGCTGAGTATGGCGGCGGGTGCGGCGCCGGGGCCGCAGATGGCGGGCGCGGCGGCGGCGCTGGCGGACACGCTGCCACGCGCCGGTGACCTTCGGCGACGCGCGTTACGTCGCCTCGCCGCACTAGCGCAGCTCGCCGCCTCGCGACTGCAGACGGATAACCCGCTACATCTGAAAGCCTTAGAACAAACAAGAGCTATTCTAGCCGAAGCCAAATCTGTCGAGTAG
- Protein Sequence
- MSLFRKPKKIQRRVFCGDDDDDGDPEPPPPPIISQNKKENKPVKSIQLLSFADEEEDGEVFKVKKSSQSKKLAKRREKEKHRGPDNDDTNKFDSNGDQERQEEKITEKPKKKVTLEGLILSGREALAADAEGDLSSSENEEDSRGFHRYRAENVRAALAVAPGHIPDAALIHAARKTRQQARELGDFVPITSDKSPGPGSRLRRDDDMDDDDDEDEGRIEVRGLELPNDKPKRTTAAAASDEDMNSEADEWEEQQMQKAVPAIADITAALGSSELNPFAVPPPPARADAPQLRTLLAPGRAPPATAHDLVDALQERLSELSASRGSALERRERCRSRLVGAARVRESRAARAPALDAAYRRAQAVRGYVTDLIECLDEKMPQLEALESRALALHRRRCSYLVERRRADVRDQAHDVLALAGRGGVPRAPEDPEAARRAAEREGRRRARRLKREAAGAAHRDGDSSDDELPPATAHALNTAAEEIRREAGALFADALPAWRGVRGVCARLARWRRRARTLYADAYLADSLPQLLAPYVRHQLILWNPLADEDNEDYEKMDWYKCLMMYGVRSDRVSSDSDQSSDEETTSVSEEAVRSDPDLMLVPTIVDKVVLPKVTELVEQAWDPVCVRACVRLRSILCRALELPRASCLPRLAAAAHARLAAAIAADVFLPALPPHIVEGVGGVFWRRCLGGGVRLLRATLALCAPPPPLHADPLALKLIDTLSMAAGAAPGPQMAGAAAALADTLPRAGDLRRRALRRLAALAQLAASRLQTDNPLHLKALEQTRAILAEAKSVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00164384;
- 90% Identity
- iTF_00403824;
- 80% Identity
- -