Cmes008217.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cybosia mesomella
Gene Symbol
Hr39
Assembly
GCA_946251875.1
Location
CAMIUH010000235.1:352141-368007[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.26 6.2e+03 -1.8 0.4 82 153 90 174 37 211 0.47
2 4 2.4 5.9e+04 -5.0 7.9 49 162 175 282 135 303 0.44
3 4 3.7e-08 0.0009 20.7 0.1 1 21 414 434 414 457 0.90
4 4 2e-64 4.8e-60 206.1 0.0 149 408 466 732 441 732 0.84

Sequence Information

Coding Sequence
ATGTTCCTACACTATGGTCAATTCTCCTACAGCTCGAGCGGAGTCCGCATCAGTGTATCTTCAGATCCTCACGATGAAGACTCCACTGATGCCGAGATCTCTAAAATCGACTTTTCACAACATCAGTACGAGGTTAACATGCGTAACAAGAAAAAGCGATCATCGAGTGGAGCGCACTGTGAAGTATCGAATACTGAACGCGAGCGGCCCATGTCGTGGGAGGGCGAGCTGTCAGACTCCGAAATGGTCATAGACACCAGTGTTAATAACGACGAAAACAGCAGCTCCTTAGATCTCCAGTCGTCTCGAGATTCCATCGACACTCTTCGAAATGTGACCATCAAGACAGAGCCGCTGAAGAACGAAGGATTCCAGGCAGTGGACGAGCGAGTACTGGACTTGAAGTACAACGCACCGCTGCAAACGCACCAAAGGAGTCTAAGTATGAACAGGATATCAGTACTAACAGATGCTGCGTCGTTATCATTATCTCGCCGGCCGTCGTCCCCCACAAGCAGTGCCAAGTCCTTAGCGTTAAGTGACCATGGTTCCGTGCCCATGCCGCACGCGGGACTCGATCAGGTCCACAATCTGATCATCAAGAAGGAGAGTCAGCTGTCTGAGCTTAAAAGCGAGCAGTCAGTAGGCATGGATAAGCTGATTGGTGCTTTACATGGGTCACCGCTGCTGGGCCGCTTGCCGCGCGTCCAGTCTAGTGCCAGCACTGATTCTGCTGTACACTCTATGTATACTCACAgCGTATACAGCAGTCCATCGGCCAGTCCCCGAGCGTCTCGACACTACACGCCCTCGTTGTCGCGGAACAATAGCGACGCCTCGCACTCTTCCTGCTATTCGTACAGCTCAGAATTTTCACCAACACATTCTCCAGTACAGGGTCGTCACCCCGGCATCTTGTACCGCGAAGCGCCGGCGGCCTACGACCCGACGCACGACGACGAGCCCGACGCTCCGGACGACAGACTGCATCACCACCAGGGCATCAGCCGGCAACAACTTATCAACAGTCCGTGTCCAATCTGCGGTGATAAAATCAGTGGTTTCCACTACGGGATATTCTCGTGCGAGTCCTGCAAGGGTTTCTTTAAACGCACCGTGCAGAACAGGAAGAACTACATGTGCTTAAGGGGAGGGAACTGCCCGGTCACCGTCACCACCAGGAAGAAGTGTCCCGCGTGTCGGTTTGACAAGTGTCTCGGCTGCGGGATGAAGCTCGAAGCGATCCGAGAAGATCGAACCCGTGGCGGTCGCTCAACGTACCAGTGCTCGTACACGCTGTCGGGCGCTGCGTCTACCGGCTCGCTGCTGTCGGCGCATGCGCCAACTACCTTGCGGCACGCCTCTAGCTTGACTTGTGTGAATGGCCCTGGGTCTTACAGCAGTCGAGGAGAATCCAGTAACAGTCATGTAACGCCAGATATACCGCCATTATTACAGGAAATAATGGACGTGGAACATCTCTGGCAATACAACGAGTCTGAGCTCAGTCGGTTAGGGAAGTCGACTGGTAGTCCCTCGGCCAACCCGCTGCTGGCCGCCAGTGGCATCACAGCACACAACTCCAGTCCGGACTTCTTAGCCGACCTGTGCAATATTGCCGACCACAGGTTGTACAAGATCGTCAAATGGTGCAAGAGTTTGCCACTGTTCAAGAATATATCGATCGACGACCAGATCTGCCTGCTGATCAACAGCTGGTGCGAGCTGCTGGTACTGTCGTGCTGCTACCGCGGCGTCAGCACGCCGGGCGAGGTGCGCGTGGGCGGGGGGAGGGGAATCACCTTGCATCAGAGCGCCAAGTTGGGTCTGACGCCGTGCATCGAGCGCATGTTGAGCTTCACGGATCACTTGCGGAGGCTGCGGGTCGACAGATACGAGTACGTCGCGCTTAAGGTCATCGTACTTCTCACTTCAGACGCGCCGGATCTCCGCGAAGTGGAGAAAGTACGAGCATCTCAGGAGAAAGCTTTAGCGGCGCTACAGGCTTACATTGCGACACATTCTCCTGGAACTCCCGCTAAGTTTGGAGAATTGTTGCTGCGTATACCGGAACTGCAACGGACTTGTCAGTTCTTCATGCAAGTCGGTAAAGAAATGCTTAACCCTGCTAACAAAAATAAAGACGGTGATGGACCAAGCTTCAATTTGCTCATGGAATTGCTCCGCGGTGACCACTGA
Protein Sequence
MFLHYGQFSYSSSGVRISVSSDPHDEDSTDAEISKIDFSQHQYEVNMRNKKKRSSSGAHCEVSNTERERPMSWEGELSDSEMVIDTSVNNDENSSSLDLQSSRDSIDTLRNVTIKTEPLKNEGFQAVDERVLDLKYNAPLQTHQRSLSMNRISVLTDAASLSLSRRPSSPTSSAKSLALSDHGSVPMPHAGLDQVHNLIIKKESQLSELKSEQSVGMDKLIGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPGILYREAPAAYDPTHDDEPDAPDDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVTTRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYTLSGAASTGSLLSAHAPTTLRHASSLTCVNGPGSYSSRGESSNSHVTPDIPPLLQEIMDVEHLWQYNESELSRLGKSTGSPSANPLLAASGITAHNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLHQSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPDLREVEKVRASQEKALAALQAYIATHSPGTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKNKDGDGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00042698;
90% Identity
iTF_00806824;
80% Identity
iTF_00405113;