Cmes015713.1
Basic Information
- Insect
- Cybosia mesomella
- Gene Symbol
- -
- Assembly
- GCA_946251875.1
- Location
- CAMIUH010000446.1:39009-41120[-]
Transcription Factor Domain
- TF Family
- IRF
- Domain
- IRF domain
- PFAM
- PF00605
- TF Group
- Helix-turn-helix
- Description
- This family of transcription factors are important in the regulation of interferons in response to infection by virus and in the regulation of interferon-inducible genes. Three of the five conserved tryptophan residues bind to DNA.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-09 0.00017 23.8 4.5 19 104 27 108 15 109 0.87 2 2 0.39 2.8e+04 -2.6 0.0 42 62 435 455 427 471 0.72
Sequence Information
- Coding Sequence
- ATGACTTCTCCAGATGATATATATAACTTCATAAACAAATCGTTTACCCAAGCGCGGAATGAGGCAAGCAAAGAGAGTAATTATAATATGAAACGTCGCAAAATATTTCGAGTACCATGGatgaacaataatataatacaactaTGCGATAAACGTGATAAGCTCTTTCGTCTATGGAAAAAAAATCCAACAAACCTACAACTAAAattagattataataaaactaggaaTAAAGTGCACAGTCTATTAGAAAAAAGTAGAAACCTATATTACATTAAAcacattgaaaataattttaataacacaAAAAAGGTGTACCAAATAATTAATCAAATGCTAGGGCGTGTGACATTAACAGTTGACGAAGTAATTATGAAGGCCTTTGATAATCAGGGATATAGTATTAAGACACTAGCCAACAACTTTGCAGATAATTTTAACAATAcagtcaaaaaaataattcctaACTGTAGTCGAAAATTACTAGATTCAGTAAGCAACAGGAAACCTTTGAACTCTTCAATACTATTCCAACAAGCTACTgcagaaaatattcaaaacgttATTAAAGACCTGGATCCCAATAAAGCCCCTGGTGACGACGCCATTAAAATTTCCgacgttaaaataataaaaaaagaaatatcaatAGCTATAGCAAATCTCATCAATACTAGTGTTAGATCAGGAATATATCCGGACGCATTGAAAAGAGGCTGTGTGAGACCTGTTTTAAAAAAAGGGAAGCGCAATGACGTTGACAACTATAGACCGATAACTCTTCTATCTACAGTAGATAAAATCGTTGAAAAGTACGTGTGTGAACAAATGCATAAGTTTTACAGCAAACATAAAATTCTATATCCCAATCAATTTGGTTTTCAACGTGGTAAAGGTACAACAGAACTTATGTCAAATTTTACGGACGAAGTTAATGCCCATCTAAACGACAAAAGACACGTATTGGCCCTATTTATCGACTTCTCACGTGCGTTTGATACCCTACAGCATAGGCAGCTTGTAAGTAAGCTTGAAACGTGCGGTATACGGGGCCCCCTACTTGGCTGGTGCAAAACTTACCTAAACAACCGAACTTTCCTAGTCAAAATCAATGACACACGTAGCAAAACGGTAACCACTACTGAGGGAACGGCACAGGGATCGGTAATCGGCCCATTGCATTTTTTGACATACGTCAATGATATGAGTAACCACCTAGAATACTCCAAATGCTACCAATTTGCTGATGATACGTGCCTAATTGTCGCCGATAGAGACCCAAATGAGGCCTGCAAGCTACTGCAAGCAGACTTCAATGTGTTAAATAGGTGGTGTCATAACAACGGTCTAGTACTCAATGTAAACAAGACCAAACTCATGCACATTAAGTCACCCTACCTTAAGCACCCGCTAACCAATACAATAACGGTACATAACCACATTTGCCTTCACCGTGGTCTAGCCAACGTCTCTTCCTGCTGCTGCCCGGTTATCCAACTTACTGACTCTCATACATACTTGGGTCTCAAAATTGACACCAATTTAAACTGGACACATCATATAGAACACGTTTGTAACAAATTGAGACAGTTCCTGGCCAATATTACTATGTTGAGAGACCGTATACCATATAAGGTAAGGATAATGTTGTACAATTCATTAGCTGAATCCCATGTCCAGTACTGCCTCAGTAGCTATGGTCGCACCTATAAAACATACCTGAAGAGAATTTACAACTTACAGTTACGAATATTGATGAAATTAGTATCACCAAAAACCAAACTACAGTACGAAAACGATGAATTAGGCCTTTTTAAACACTGTAATATATTACCCGTCCAGCtccaatttaaattgaatttaataaaagaacaattttttaatccATGTTTACTCACCAAAGTGGAGCACTCTGTGTATACGAGAAGTATTGCACAAAACAAGTTTTGTACTATGCGCGCTGATAATACATTCGGTGAACGAACTACTCGATACTTGGTGCCTCGCTTAGTGAATGAACTACCCTCAGATCTACGTAATAACATGACCGAAAAAAGTACTaaatcagtattaaaaaaaatccttatagacaatattgacatttttaaataa
- Protein Sequence
- MTSPDDIYNFINKSFTQARNEASKESNYNMKRRKIFRVPWMNNNIIQLCDKRDKLFRLWKKNPTNLQLKLDYNKTRNKVHSLLEKSRNLYYIKHIENNFNNTKKVYQIINQMLGRVTLTVDEVIMKAFDNQGYSIKTLANNFADNFNNTVKKIIPNCSRKLLDSVSNRKPLNSSILFQQATAENIQNVIKDLDPNKAPGDDAIKISDVKIIKKEISIAIANLINTSVRSGIYPDALKRGCVRPVLKKGKRNDVDNYRPITLLSTVDKIVEKYVCEQMHKFYSKHKILYPNQFGFQRGKGTTELMSNFTDEVNAHLNDKRHVLALFIDFSRAFDTLQHRQLVSKLETCGIRGPLLGWCKTYLNNRTFLVKINDTRSKTVTTTEGTAQGSVIGPLHFLTYVNDMSNHLEYSKCYQFADDTCLIVADRDPNEACKLLQADFNVLNRWCHNNGLVLNVNKTKLMHIKSPYLKHPLTNTITVHNHICLHRGLANVSSCCCPVIQLTDSHTYLGLKIDTNLNWTHHIEHVCNKLRQFLANITMLRDRIPYKVRIMLYNSLAESHVQYCLSSYGRTYKTYLKRIYNLQLRILMKLVSPKTKLQYENDELGLFKHCNILPVQLQFKLNLIKEQFFNPCLLTKVEHSVYTRSIAQNKFCTMRADNTFGERTTRYLVPRLVNELPSDLRNNMTEKSTKSVLKKILIDNIDIFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -