Csei022672.1
Basic Information
- Insect
- Cyaniris semiargus
- Gene Symbol
- Hr39
- Assembly
- GCA_905187585.1
- Location
- LR994554.1:16187966-16199288[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.047 5.8e+02 0.1 4.5 78 173 204 322 68 333 0.64 2 5 5.1e-08 0.00064 19.7 0.1 1 20 423 442 423 456 0.91 3 5 0.024 3e+02 1.0 0.0 77 119 469 509 450 537 0.67 4 5 4.2e-43 5.2e-39 135.3 0.0 165 339 487 662 472 672 0.79 5 5 0.21 2.6e+03 -2.1 0.0 388 408 674 694 662 694 0.75
Sequence Information
- Coding Sequence
- ATGAATACGATGGGTGACGCTGAGCCTGTGAAGGTGGAAGGGGGACATATCTCTGTGACCACCATCAGCATGTCGGGCCCAGACAATAGCAATGGTCAATTCTCGTACAGCTCCAGTGGAGTCCGCATCAACGTGTCGTCGGACATCCACGACGAGGACTCTACCGATGCCGAAATATCCAAAATTGACTTCAATCAACATCAATATGAGGTCAATATGCGGAATAAGAAGAAGCGGTCGAGCGGTCAGTTTGAGCACCCCAATCCCTCCCAGGAGAGACCAATGTCGTGGGAGGGAGAACTCTCTGACTCTGAAATGGTCATAGACACCAGTGGGAATAATGACGAGAACAGCAATTCCCTTGAGCTGCAGTCATCCCGGGACTCCATAGACACTCTCCGCAATGTCACCGTCAAGTCCGAGCCTCGGCACGAACAGGACGACCGCGTGCTGGACCTCAAGTATAACGCGCTGCAGCCGCATCAGAGGAGTCTGAGTATGAACAGGATATCCGACAGCAGTCTATCTCTGTCGCGGCGGCCATCTTCGCCCGCGGGCAAGCCGAGCGCGGAGTTTGAGCCGCCGCCGAACCCGCTAGCCGAAGTACAGAACCTCAGCATCAAGAAGGAGCAGCTTTCAGAGTTGAAATGCGAGCCGCTAAGCATGGAGAAGATCCTGAGTGTCGGTTCACCGTTACTGGGGCGGCTGCCGCGCGTGCAGTCCAGCGCCAGCACCGACTCCGCTGTACACTCCATGTATACGCACAGCGTCTATAGCAGTCCGTCGGCGTCGCCTCGTCCGCAGCGGCTGTACACGCCGTCGCTGTCGCGCAACAACAGCGATGCGTCACATTCCTCCTGCTACTCCTACAGCTCCGACGACGCGTCGCACTCCTCCTGCTACTCCTACAGCTCCGAGTTCTCGCCCACGCACTCGCCCGTGCAGAGCCGGCATCCGCACCTGGTGTACCGCGAGGCTGGTGGCGTTGAGGAGGACGACGGCGGAGAGCAGCTACATCACCACCAGGGGATCAGCAGACAACAGCTTATTAATAGTCCATGCCCCATCTGCGGCGACAAGATCTCCGGGTTCCACTACGGGATATTCTCGTGCGAGTCCTGCAAGGGGTTCTTCAAGCGCACGGTCCAGAACCGCAAGAACTACATGTGCCTGCGCGGCGGGAACTGTCCCGTCACTGTCGCGACGAGGAAGAAGTGTCCCGCCTGTCGATTCGATAAGTGTCTGTGCTGTGGGATGAAGCTTGAAGCGATCCGCGAGGACCGTACGCGTGGCGGGCGCAGCACCTACCAGTGCTCGTACTCGCTGTCCGGCGCCGCGTCCACCGGCTCGCTGCTGGCTGCGCCCGCGCCACCCGCGCAGCTCCGACACGCCTCCAGCCTCACTTGTGTGAACGGCCCAGCGTCGTACAGCAGTCGAGGCGAGGGCAGCAGCAGCCGCCTCACGCCTGACATACCGCCGTTATTGCAAGAGATAATGGACGTGGAGCACCTGTGGCAGTACAACGAGTCGGAGCTCCCGCACCGGGGGTCGGGCTCGAACCCCCTGCTCGCGGCGTCCGGCATCACAGCCACTGCCGCCAGCGCAGACTTCCTGGCTGATCTTTGTCACGTTGCTGATCATAGACTGTACAAGATCGTGAAGTGGTGCAAGAGTTTGCCGTTGTTTAAGAATATTTCGATTGACGACCAGATCTGCCTGCTGATCAACAGCTGGTGCGAGCTGCTGGTGCTGTCGTGCTGCTACCGCGGCGTCGCCTGCCCCGGCGAGGTGCGAGTCGGCGGACCCAACGGCATCACGCTGCAGCAGAGCGCCAAATATGGTTTGACGCCGTGCATCGAGCGCATGTTGAGCTTCACTGACCACCTGCGGCGGCTGCGCGTCGACCGGTACGAGTACGTCGCGCTCAAGGTCATCGTGCTGCTCACCTCCGACGCTGCGGAGCTGCGCGAGGCTGAGAAGTTCTTCATGCAAGTCGGCAAGGAGATGCTGAACCCGGCGAACAAGAAAGACGGCGACGGCCCCAGCTTCAACCTGCTCATGGAGCTGCTGCGGGGCGACCACTGA
- Protein Sequence
- MNTMGDAEPVKVEGGHISVTTISMSGPDNSNGQFSYSSSGVRINVSSDIHDEDSTDAEISKIDFNQHQYEVNMRNKKKRSSGQFEHPNPSQERPMSWEGELSDSEMVIDTSGNNDENSNSLELQSSRDSIDTLRNVTVKSEPRHEQDDRVLDLKYNALQPHQRSLSMNRISDSSLSLSRRPSSPAGKPSAEFEPPPNPLAEVQNLSIKKEQLSELKCEPLSMEKILSVGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRPQRLYTPSLSRNNSDASHSSCYSYSSDDASHSSCYSYSSEFSPTHSPVQSRHPHLVYREAGGVEEDDGGEQLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLCCGMKLEAIREDRTRGGRSTYQCSYSLSGAASTGSLLAAPAPPAQLRHASSLTCVNGPASYSSRGEGSSSRLTPDIPPLLQEIMDVEHLWQYNESELPHRGSGSNPLLAASGITATAASADFLADLCHVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVACPGEVRVGGPNGITLQQSAKYGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAAELREAEKFFMQVGKEMLNPANKKDGDGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00985246;
- 90% Identity
- iTF_00933945;
- 80% Identity
- iTF_00403927;