Csei009976.1
Basic Information
- Insect
- Cyaniris semiargus
- Gene Symbol
- -
- Assembly
- GCA_905187585.1
- Location
- LR994553.1:15060713-15062668[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-09 5.4e-07 29.7 0.0 3 41 16 54 15 56 0.95
Sequence Information
- Coding Sequence
- ATGACGGACCCTAAAGCTAAAATTAAATATTACAATTGGAATATAGAGGACCTAGAAAGGGCTGTTGCGGCTTACGAAAATAAAGAATTAAGTTTGAACCAAATTTCAAACACTTATTCTATACCAAAACCTACAATTCTACGGCATGTAAAAAAGAAAAATAAGATTGCTGTTGATACAAAAATCCAAAAAGGGAGACCGGTTATCTTCGATGTTGAAACTGAAAACAAGTTGGCTGAGCATATTCTTTATCTCGAAACACACATGTTTGGTCTAACAATAAGCGATATTCGACGTCTTGCATTTGAAATTGCTGAAATCCATAATATTCAGAATAATTTTAATAAAGAAAAACGCATAGCTGGCAAAGCATGGTTCTACAAATTTATGAAAAGGCACCCACAACTAAGTGTTCGACAACCTGAAAACACATCTTTGAATAGAATTAAAGGATTCAATAAAGAAAATGTTTTTCACTTTTTTGATTTGTTAGAGAAGATTGTAGATGAAAATGGTATAGAACCTACCAATATCTTCAATGTAGACGAAAGTGGATTTTCAACCGTGCAAAAGAAACCTCAAAAAATTGTAGGATTAAAGGGAAAGAAGCAAATTGGCGCTGCCACTAGTGGAGAACGAGGTGTCAATACCACTGCCGTATGCTGCGCTAGCGTATCTGGCCAATTTATCCCTCCAATGCTAATATTTAAAAGGATGAGACAAAACCCAGAACTAGCAAATGGTGCTCCTTTAGGGAGCGTTGTTACTGTTTCTGAAAGCGGTTACATTAACTCTGCGCTCTTTGTTGAATGGTTAAAGCACTTTATTAAAATAGTAAAGCCCACACTTGAAAACAAAGTTCTGCTGCTTTTGGATGGACATACAACACATTCAAAAAATTTGGAAGCTTTGTGTTTAGCGAGAGATAATGGAATAATACTGTTACAACTACCAGGTCACACCACAAATCGAATTCAGCCTCTTGACGTTTTGTTTTTCAAACCACTGAGTACTTATTACATCCAAAGCACAGAAAAATGGTTGAGAACCAATCCTGGGCGACAAGTAACACAATACCAAGTTGCTCAATTATTTGGAGAAGCTTACGAAAGAGCAGCAGTGATTGGCAATATTGTGAATGGATTCAGAGCTAGTGGAATTTGGACTATAAACAGACATGTTTTTCCAGAGCATATGTTTGAGGCTGCTGACAATTTGCTAACCGCTGAAACAGCCAATTCGAGCAACGAAAGCGTATCAGTTTTGCAAAATTTTACGGAATTAGAAAAAAAAGATGACCTAAAGAAAGAAAAAAAGGTAGAAGGAAATGATGACAAAGAAAATTACAATCAAGAAAAGGGCAATAACGAAAAGAAAAAACAAGAAAAGGAGCATTTAAATTCTTCCCTTACTGAAATATATGCACAGCCATCGACGTCGAAAAATAAATATATTCAACTGAAAACTACGCCTGCTGATATTAAAAAAACCATAAAAGTTTTATCACCACTACCAAAAAATACATTGAAAAAGAAGAACACTATACAAAAAGCTATTGAAATTACATCAAGCCCATATAAAAATCAACTAGAAGACAAGATAAAGCAGAAGAAAGTTAAAGTAAAGAAAGAAAAGGTTTGTAAACCAAAGAATTACCAAACAGTGAAAAAAGAAAATAAGATAACAGCTATATCCAAGGGTAAATGCAAAAGTTTTAAGAAGAAACGATCCCCTTCCATCACTAGTAGCGATGACTCAGAAGAAACACTTGTTATGGAATTAGATGACGATGATGACAGCGATGATGATCTCGAAAATATATGTGGAAAGTGCAATCGTTCTTACTATGATAAAAAGGGTCCAAAGGTTGATTGGATTCAATGCGTTCGCTGTCAGCGGTGGTTACATGAAACATGTACTTCCAATCCAGACATTTGCGATGATTGTTTCCGATAA
- Protein Sequence
- MTDPKAKIKYYNWNIEDLERAVAAYENKELSLNQISNTYSIPKPTILRHVKKKNKIAVDTKIQKGRPVIFDVETENKLAEHILYLETHMFGLTISDIRRLAFEIAEIHNIQNNFNKEKRIAGKAWFYKFMKRHPQLSVRQPENTSLNRIKGFNKENVFHFFDLLEKIVDENGIEPTNIFNVDESGFSTVQKKPQKIVGLKGKKQIGAATSGERGVNTTAVCCASVSGQFIPPMLIFKRMRQNPELANGAPLGSVVTVSESGYINSALFVEWLKHFIKIVKPTLENKVLLLLDGHTTHSKNLEALCLARDNGIILLQLPGHTTNRIQPLDVLFFKPLSTYYIQSTEKWLRTNPGRQVTQYQVAQLFGEAYERAAVIGNIVNGFRASGIWTINRHVFPEHMFEAADNLLTAETANSSNESVSVLQNFTELEKKDDLKKEKKVEGNDDKENYNQEKGNNEKKKQEKEHLNSSLTEIYAQPSTSKNKYIQLKTTPADIKKTIKVLSPLPKNTLKKKNTIQKAIEITSSPYKNQLEDKIKQKKVKVKKEKVCKPKNYQTVKKENKITAISKGKCKSFKKKRSPSITSSDDSEETLVMELDDDDDSDDDLENICGKCNRSYYDKKGPKVDWIQCVRCQRWLHETCTSNPDICDDCFR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01507158;
- 90% Identity
- iTF_01340028; iTF_00824675; iTF_00824674; iTF_01333738; iTF_00636299; iTF_01090673; iTF_01090672; iTF_01178462; iTF_01264466;
- 80% Identity
- -