Cbre010717.1
Basic Information
- Insect
- Culicoides brevitarsis
- Gene Symbol
- dmd-4
- Assembly
- GCA_036172545.2
- Location
- CM070087.1:6769049-6771551[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-25 1.7e-21 75.6 10.4 1 47 45 91 45 91 0.98 2 2 0.17 5.1e+02 0.4 0.2 29 39 254 264 251 272 0.60
Sequence Information
- Coding Sequence
- atGATCCCAATAATAAAATCTCAAGAAGAGtcaaaagaattaaaagaagaaaaagatcaaaaaatgggaaaatctCGCGTTccaaaaggaaataaattgtCAATGGCTTTAAATGCCTACGGGAATAATCCGCGAGTGCCAAAGTGTGCAAGATGTAGAAATCATGGAATTATCTCCGGATTGAGGGGacataagaaaaattgttcctACAGAAATTGTCGATGTGCAAAATGTTCGCTTATTTTTGAGCGTCAAAGGATTATGGCTCagcaggTTGCCCTCAAGCGTCAACAAGCGGTCGAAGATGCAATCGCTCTTCGTTTGGTCAATGAGAACGGAACACATTTGGAGCAACTGCCTCCcggaaaaatttatggaatgaCAGTGACAGAACCTTGTGCTTCTCCCAATAAATCTCCATCGCCCAATATCGTCGAGAatgattcaaagaaaaattcggAACAAGCTCAAGTTTCTCAAAATGCGATTGATATGTTAGCTCAACTCTTTCCGCATCGCAAACGGAGCGTGCTTGAACTCATTCTCAAACGTTGCGATTCTGACTTGATTCGAGCGATTGAACAATGCAGCAAACCCCAAACAACTTCAGCTTCTTCGGCATTTAGACCACCCGCACCATCGTCGCAGCAgatcCATCCTGATGCCACGTCAGTTCCTCCATACACTCCTCCGTCATTCGTTTATTATCCGAAATGGTTGTTTCCTGTAACCATGAATTTACCAAATTTAGCTCCAAgATGTCAAATTCCACACTGCACTTGCATTGCAAGTTCGTCGCCAGTATTTGCTCATCAAACATTGAGTccgtaa
- Protein Sequence
- MIPIIKSQEESKELKEEKDQKMGKSRVPKGNKLSMALNAYGNNPRVPKCARCRNHGIISGLRGHKKNCSYRNCRCAKCSLIFERQRIMAQQVALKRQQAVEDAIALRLVNENGTHLEQLPPGKIYGMTVTEPCASPNKSPSPNIVENDSKKNSEQAQVSQNAIDMLAQLFPHRKRSVLELILKRCDSDLIRAIEQCSKPQTTSASSAFRPPAPSSQQIHPDATSVPPYTPPSFVYYPKWLFPVTMNLPNLAPRCQIPHCTCIASSSPVFAHQTLSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -