Cqui007146.1
Basic Information
- Insect
- Culex quinquefasciatus
- Gene Symbol
- stc
- Assembly
- GCA_015732765.1
- Location
- NC:140617431-140634019[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.9 1.4e+04 -4.0 1.6 15 19 311 315 310 315 0.81 2 15 0.089 6.6e+02 0.2 0.5 4 10 344 350 343 352 0.94 3 15 9.6e-06 0.071 12.9 17.9 3 19 357 373 350 373 0.84 4 15 2.4e-09 1.8e-05 24.4 13.0 1 18 409 426 409 427 0.98 5 15 1.8 1.4e+04 -4.0 1.2 6 10 457 461 457 461 0.96 6 15 2.5e-07 0.0019 17.9 11.7 1 18 467 484 467 485 0.96 7 15 2 1.4e+04 -4.1 0.4 6 10 516 520 516 521 0.89 8 15 0.002 15 5.5 13.1 1 18 526 547 526 548 0.86 9 15 0.15 1.1e+03 -0.6 7.7 1 11 588 598 588 599 0.93 10 15 0.77 5.7e+03 -2.8 1.4 4 10 603 609 602 609 0.92 11 15 1.8e-07 0.0013 18.4 16.4 1 18 615 632 615 633 0.97 12 15 2 1.5e+04 -11.5 15.4 10 18 680 689 666 690 0.78 13 15 6.3e-06 0.047 13.5 9.8 1 16 726 741 726 743 0.92 14 15 7.5e-06 0.055 13.2 13.2 2 18 762 780 761 781 0.85 15 15 0.62 4.6e+03 -2.5 0.1 8 12 797 801 794 801 0.85
Sequence Information
- Coding Sequence
- ATGGCCAACGCCGGCGAAGGTTCCTCGTCGGGCAGTGGACGCCAGCAAAATCACCAGAGCTTCGAGCAGTTCATCTCGCAGTTCAACAACCGCACTTCCATCCAGCCTCAGCAGCAACAGGGCGGAGCAGGTTCATCGTCCCACGTGGAGTCGTCCAGCTTGAAGCCGACCGCGGCCGAGTTCGTACCACGGTGGCAGAACGAACCTGGCCAGCCGAGGGGTCAACCCCAAGAGAATGGAGGTGGTGGTGGCCGGGGTGGGAACGGTAACAACGGAGGAGTGCGCAGGCAGTACAACGAAGGAGGACCGCGGTGGAACAACGGAGGACGGAGGAATAACCGTGGTGGCGGCGGCGCTGACGATTATGGCAAGAACCGCCGCGGGCGGAACTTTAACGATTCCCGGGATGACCGAACGGATGATGGAGGTGGGTTCTACGAGCAGGATAGGCCGCAACGGCAGCAGCGAAACCACCACCAACAGCAgcaacatcagcagcagcagcagcagcagagtaaCGGTGGTGGGAGATGGAAGGGAAACGCCGGAGGAGGAAGATTCCGGAATGGTGGTGGGGGAAGGGGCCCGAAGAATGAGAGGGAACAGGGTCCGATGGGGAATGGAGGTGAGGAGCACCAGAGACAGGTGGAACCTGTGTCGTCGGCGCCGGAACGAAAGGAACGTCGACCAAATGGTTATCAGCGGCAGCGTGCACGACAGGAAAAGCTGGAGGCCAACATCATCTCCAAGTGTTCGCAGCGCGAGAAGCTGATCCGTGAGCTGGACTCGTGCCGGGTCGAGTGTCTCGTGTGCTGCGAGCTCGTCCGTCCGACGCAGTCGGTTTGGTCCTGCCTCAACTGCTATCACATTCTTCACCTGAACTGCACCACCAAGTGGGCCAATTCTTCCCAGTCGGACGACGGTTGGCGCTGTCCGGCCTGCCAGAACGTGTCGAAGAAGATCCCGCGGGATTATTACTGCTTCTGTGGCAAGCAGAAGAACCCGCAGTACAACCGCAGTGACGTGGCCCACTCGTGCGGGGAACTGTGCGGCCGGGAAGATCTGTGCGAACATCCGTGCACGTTGCTTTGCCATCCGGGACCGTGTCCACCGTGTCAGGCGATGGTTCAACGTAGTTGTGGGTGTGGTCGTACGACGAAGCCACTGCAGTGCAGCCAAAAGGACGACATAGCGTGCGAAGCGATCTGCGCGAAACCGCTCAACTGCGGAATTCACACGTGCCAGCAAAAGTGCCACGTGGGTGACTGTGCGGAGTGTGGGGAAACGCTGGAACACGAGTGTCACTGTGGCAAGCAGAAGAAGCAGGTCACCTGCACGGTGTCCAATCTGGACAACACCCGGTTCTGCTGCGAGGCGGTTTGCGATGCCCAGCTCAGCTGTAACAACCACGCCTGTACCAAGGTATGTCACGCAGGTCCCTGCGGAGAATGCGTCCTCTCGCCAACCCTGGTCACGTCCTGTCCCTGCGGCAAACAGGCCATCGTCAAGggcgaacgcaaaagctgtctggaTCCGATTCCGATCTGCAAAGCCGTCTGCGGCAAACAGCTTCCTTGCGGAAGTCCCGGCGCTCATCACGTGTGCTCCGCCAAATGCCATCTGGATGAATGCCCACCCTGCAACAAGACCACGATGGTCAAGTGTCGCTGCGGCCACATGGACCAGCAAATCAAGTGCAAACAGCTGCAAACTCGAGCCGACGACGCTCGCTGCAAGAAACGCTGCACGCGGATGAGAAGCTGCGCCAAGCACAAATGTAACCAGGAATGCTGCATCGATTACGATCACATCTGCACCAAGACCTGCTCGCAAGCCCTCACCTGCGGCCGACATCGCTGCGACAAACCGTGCCACCGCGGCTCGTGCAGCACCTGCCACCGGGTTTCATTCGACGAACTAACCTGCGAGTGCGGTGCAGCCGTCATCTTCCCGCCGGTGCCTTGCGGAACGAGCAAACCTCCCTGCAACAAACCCTGCTCCCGCCAGCACCCCTGTTCCCACCCAGTCCTCCACAACTGTCACTCCGAACCCAACTGTCCGCCCTGTGTCGTCCTCACTACCCAGCACTGCTATGGCAAACACGAACAGCGCAAAACCATCCCCTGCTACCAAAGCTCCTTCAGCTGTGGACTCGCCTGCGCCAAACAACTTCCGTGTGGCCGCCACACGTGCATCAAACCGTGCCACGAAAACGGATGCCAATCGAACGCCGCCGAGCCGGAAGTGTGTCGCCAGAGTTGCACCAAAACGCGCACGACCTGCGCCCACCAGTGCAAGGCGCCGTGCCACGAGGGCGAGTGCCCGCCGGATCTGCCCTGCCGGGAGATGGTCGAGGTGACGTGCGAGTGTGGCAACCGGAAGCAGATGCGCACGTGTCACGACTTTAGCAAGGAGTACCGCCGCATCACGTCCGCCCAGCTGGCCTCGTCGATGCAGGAAATGCAACGCGGTGGATCCGTCGAGCTGAGCGACATCCTGGGCACAGGAAAGCCGAAGAGTAACAAGACCCTGGAATGCAACGACGAGTGCCGCACGCTGGAGCGCAACCGCCGGCTCGCCATCGGACTGCAGATCCGCAACCCGGACCTGTCGTCCAAGCTGCAGCCCAACTACTCCGAGTTCCTGCGGACGTACGCCAAAAAGGACCCGGCCCTGATCAAGATGATCCACGACCGGCTGAGCGAGCTGGTTAAGCTGGCCAAGGAAAGCAAACACCAAAAGTCGCGCTCCTTCTCCTTCCCGGTGATGAACCGCGAGAAGCGCCACGTGGTGCACGAAATGTGCGGCATGTTCGGCATCGAGTCCGTCGCGTACGACGCGGAACCGAACCGGAACGTGGTGGCCACCGCCGATCGATTCAagTCGTGGCTGCCGAGCATGAGCCTGCTGGAGGTCATCCAACGGGAAAACGGCCAGCGGCGGGTGATTGTGCCCAACCTGAACGCCTGGGGCAGAAcggccaacagcagcagcagcgcggcCAAATGA
- Protein Sequence
- MANAGEGSSSGSGRQQNHQSFEQFISQFNNRTSIQPQQQQGGAGSSSHVESSSLKPTAAEFVPRWQNEPGQPRGQPQENGGGGGRGGNGNNGGVRRQYNEGGPRWNNGGRRNNRGGGGADDYGKNRRGRNFNDSRDDRTDDGGGFYEQDRPQRQQRNHHQQQQHQQQQQQQSNGGGRWKGNAGGGRFRNGGGGRGPKNEREQGPMGNGGEEHQRQVEPVSSAPERKERRPNGYQRQRARQEKLEANIISKCSQREKLIRELDSCRVECLVCCELVRPTQSVWSCLNCYHILHLNCTTKWANSSQSDDGWRCPACQNVSKKIPRDYYCFCGKQKNPQYNRSDVAHSCGELCGREDLCEHPCTLLCHPGPCPPCQAMVQRSCGCGRTTKPLQCSQKDDIACEAICAKPLNCGIHTCQQKCHVGDCAECGETLEHECHCGKQKKQVTCTVSNLDNTRFCCEAVCDAQLSCNNHACTKVCHAGPCGECVLSPTLVTSCPCGKQAIVKGERKSCLDPIPICKAVCGKQLPCGSPGAHHVCSAKCHLDECPPCNKTTMVKCRCGHMDQQIKCKQLQTRADDARCKKRCTRMRSCAKHKCNQECCIDYDHICTKTCSQALTCGRHRCDKPCHRGSCSTCHRVSFDELTCECGAAVIFPPVPCGTSKPPCNKPCSRQHPCSHPVLHNCHSEPNCPPCVVLTTQHCYGKHEQRKTIPCYQSSFSCGLACAKQLPCGRHTCIKPCHENGCQSNAAEPEVCRQSCTKTRTTCAHQCKAPCHEGECPPDLPCREMVEVTCECGNRKQMRTCHDFSKEYRRITSAQLASSMQEMQRGGSVELSDILGTGKPKSNKTLECNDECRTLERNRRLAIGLQIRNPDLSSKLQPNYSEFLRTYAKKDPALIKMIHDRLSELVKLAKESKHQKSRSFSFPVMNREKRHVVHEMCGMFGIESVAYDAEPNRNVVATADRFKSWLPSMSLLEVIQRENGQRRVIVPNLNAWGRTANSSSSAAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00401390;
- 90% Identity
- iTF_00401390;
- 80% Identity
- -