Cqui012492.1
Basic Information
- Insect
- Culex quinquefasciatus
- Gene Symbol
- nfxl1
- Assembly
- GCA_015732765.1
- Location
- NC:120419798-120422831[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.89 6.6e+03 -3.0 1.4 14 19 198 203 198 203 0.86 2 15 0.16 1.2e+03 -0.6 0.8 4 10 234 240 233 240 0.95 3 15 1.1e-07 0.00084 19.0 16.7 1 19 248 265 248 265 0.99 4 15 0.00014 1.1 9.1 12.8 1 19 298 317 298 317 0.95 5 15 1.8e-09 1.3e-05 24.8 13.6 1 19 352 370 352 370 0.99 6 15 1.7 1.3e+04 -3.9 0.8 6 10 395 399 394 401 0.54 7 15 1.2e-05 0.087 12.6 12.2 1 18 405 422 405 423 0.92 8 15 0.00013 0.97 9.3 17.1 1 18 457 474 457 475 0.98 9 15 6.4e-09 4.8e-05 23.0 15.9 1 18 484 501 484 502 0.97 10 15 0.058 4.3e+02 0.8 17.0 8 19 547 558 540 558 0.82 11 15 0.04 3e+02 1.3 4.7 4 12 572 580 570 580 0.86 12 15 0.00031 2.3 8.1 5.0 1 11 651 661 651 662 0.96 13 15 0.58 4.3e+03 -2.4 0.7 15 19 675 679 674 679 0.80 14 15 0.0068 50 3.8 19.0 1 19 690 707 690 707 0.93 15 15 2.2e-07 0.0016 18.1 12.0 1 16 758 772 758 778 0.88
Sequence Information
- Coding Sequence
- ATGTCCACCCGAAACCGTCACCACCACAAAGGCAACGCGCAACCGGCCAACCCGTGGAATCGGGGAAACAACGCGGGGTCGACGGATGGCCAGCAGCAGCCAAAGGTGAAAAACGTCAAAACACCGGCTAACAGCGGTGGCCCATCGAGTTCGCTGAAAAAGTCCGAGGAAAAGTTCGCTCAGGCCCACCAGAAGAACCTGGAAGCGGCCAAAAAGTACGCCGCCCAGCAGTCGTACGAGTCCAGCGAGGATGAGGATGAGCGGGGTGGAAGTGATGGCCCGACGCAGGACATTTTGGGATCCGTGCTGAAGAACTACGGAGGCGGTGGTGGGGATATTGGCAAGACCCAGGAGTACCTGCAGAACCTGCTGGAGTCCCGTTCGGCGGTTTGTTTGATCTGCATTGGCACGGTGAAGCGGGCGGACTCGATCTGGTCCTGCAAGAGTTGCTACACGTTCTTTCATCTGCTGTGCATTCAACGGTGGGCGAACGATAGCATTTCGCAGAAGCGAATCTCCCACGAACAGCAGGAAGGTTACTACAACAGTCGGGGCGAGTACATCCCGAAGCCGGCACTGTCGGTGCACTGGGACTGTCCGAAGTGCCGCAAGGAGTACGAACCGGTGGACATTCCGCGCCACTACGAGTGCTTTTGCGCCAAGGAGTTGAACCCGGCAAATCACCTCTGGTTGATACCGCACTCGTGCGGCGAGACTTGCCGGAAGCGGCTCGTGCCGGACTGCGGTCACAACTGTGTCCTGCTGTGCCATCCGGGACCGTGTCCGCCGTGTCCGCAGACGGTCGTCGTGTCGTGCCAGTCGAACGCGAAAACGATTCGTTGCTCGCAGCGATCCTGGACCTGTCTGAAGACGTGCAAGCTCAAACGGAACTGCGGAATCCACGAGTGTGGCGGTGTATGCCACGCGGCGTCGGAGTGTCCACCGTGTACGAGCCGAAGCAAACAGAAATGTGCGTGCGGTTCACGAACCAAAGAGGTGAACTGTTCCGAGTCGCGTTGGTCCTGCGGGAAGGTTTGCGGCAAGAAGTACGCGTGCGGATTGCACAGCTGCGAAAAAGTTTGCCACGAAGGTGACTGCGGCGAGTGTCCGTTGGGATTGCCTAGGACTTGTCCTTGTGGCAAAACTAGCTCCGTCGCGTCTTGCTCCGAGGACATTGGAACGTGCGGAGATACTTGCCAAAAGTACCTGGAATGTGAACAGCATCGCTGCAGCGAACGGTGTCACTTGGGGAAATGTGGCCAATGCTTGGAACTGGTTCGCAAGGCCTGCCGCTGTGGTTCCTTGAGCAAGGAAGTTGCTTGCCACAAAGTGCTCAATTGTGACCTGAAGTGCAAGAACGTACGAAGCTGCGGCAAACATCCCTGTAACCGTAAGTGCTGCGACAGCCAATGTCCTCCGTGTGATAAAGTTTGCGGGAAAACGCTGCCTTGCGGCAAGCACAAGTGCAATTCACTCTGCCACCACGGACCGTGTTATCCCTGCAACCAGAAAGCAACCGTCAAGTGCAGGTGTACGGGCACGACCCAGGAGGTTCCGTGCGGCCGCGAGAAGAAAATCGGCGCTCCAAAATGCCGACTTCCCTGTCGAATCCACTCCAAGTGTCACCACACGAACCCGCACCACTGCCACCAGGGCGACTGTCCGCCGTGCCAGAAGATCTGTGAACTCCCCAACGATACCACCAACTGCGCCCATCCCTGCGCGGCCAAGTGCCACGACGCGGTCCGCGTAGTCACCaaagacaaaaacttcaaaccCGTCGGTCCGTGGGACGTTCCAATGGAAATCGTCGAGATTAAGCAGTTGCCGCACCCTCAATGTCAGGTCCCAGTCCCCGTGACCTGCATCGGAGGTCACGAAACGGCGCAGTGGCCTTGTTACAACTCTAAACCGGCGTCCTGTGGGCGCGAATGTGGTCGCGCTTTAAAATGCGGCGTCCACACCTGTCCCCTCCAGTGTCACGCCTTCAAGAAACGCGACACAACCGAAGAAGACCCGAGGTGCCAGTCTTGCACGGCGGGTTGCATCATCCCGCGTCCCGCCGGGTGTTCCCATCCGTGCAAGCGACCGTGTCATCCGCCACCGTGCAATCCCTGCCAGGCGCCGACAAAGGTGGCCTGCCACTGCGGACTGACGCAGATCTTCTACAAGTGTCATGAGTTTTACAGCAGCGACAAGACGGAGCAGGAGTTGGTGGCGTTCCGCGAGGGGATTCTGAGCTGCGGgcaaaaatgtatcaaaaatTTCCCCTGTGGCCATCGCTGCAACTCGACGTGCCACTCCGGCGACTGTCCGAACCCGgaagcgtgcaccaaaaaggtGAAAATCACCTGCGAATGCCGCCACCGGAGGCTGGAGGTGGCCTGCAGTGCGGCCCGCACCAACCCCCGGTCACTGGAGTGCGACGAAAGCTGCAAATCCGTAAAGGCCGCCAAGGAGCAGGTGCTGACCGAGCGCGAGCGCGCCCAAAAGGAGCAGGAGGAGGCAGAAAATCAACGCGAGTTGGAGGAGTATGAGAGAAAAGTAGGCGGCCGCAAGAAGCACCGCGAACGTAAACGAGTTCAGGTGGAGGAGACCAAAGAAAGTAACTGGATGGTGATGGTGGCCGTTCCGGTCGGAGTGCTAGTGCTTGCCATGAttgtttatttcactttgttgcGTTAA
- Protein Sequence
- MSTRNRHHHKGNAQPANPWNRGNNAGSTDGQQQPKVKNVKTPANSGGPSSSLKKSEEKFAQAHQKNLEAAKKYAAQQSYESSEDEDERGGSDGPTQDILGSVLKNYGGGGGDIGKTQEYLQNLLESRSAVCLICIGTVKRADSIWSCKSCYTFFHLLCIQRWANDSISQKRISHEQQEGYYNSRGEYIPKPALSVHWDCPKCRKEYEPVDIPRHYECFCAKELNPANHLWLIPHSCGETCRKRLVPDCGHNCVLLCHPGPCPPCPQTVVVSCQSNAKTIRCSQRSWTCLKTCKLKRNCGIHECGGVCHAASECPPCTSRSKQKCACGSRTKEVNCSESRWSCGKVCGKKYACGLHSCEKVCHEGDCGECPLGLPRTCPCGKTSSVASCSEDIGTCGDTCQKYLECEQHRCSERCHLGKCGQCLELVRKACRCGSLSKEVACHKVLNCDLKCKNVRSCGKHPCNRKCCDSQCPPCDKVCGKTLPCGKHKCNSLCHHGPCYPCNQKATVKCRCTGTTQEVPCGREKKIGAPKCRLPCRIHSKCHHTNPHHCHQGDCPPCQKICELPNDTTNCAHPCAAKCHDAVRVVTKDKNFKPVGPWDVPMEIVEIKQLPHPQCQVPVPVTCIGGHETAQWPCYNSKPASCGRECGRALKCGVHTCPLQCHAFKKRDTTEEDPRCQSCTAGCIIPRPAGCSHPCKRPCHPPPCNPCQAPTKVACHCGLTQIFYKCHEFYSSDKTEQELVAFREGILSCGQKCIKNFPCGHRCNSTCHSGDCPNPEACTKKVKITCECRHRRLEVACSAARTNPRSLECDESCKSVKAAKEQVLTERERAQKEQEEAENQRELEEYERKVGGRKKHRERKRVQVEETKESNWMVMVAVPVGVLVLAMIVYFTLLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00401389;
- 90% Identity
- iTF_00401389;
- 80% Identity
- -