Cqui008657.1
Basic Information
- Insect
- Culex quinquefasciatus
- Gene Symbol
- pnr
- Assembly
- GCA_015732765.1
- Location
- NC:200535136-200862959[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2 4.7e+03 -3.0 0.1 23 27 156 160 153 162 0.62 2 2 3.6e-17 7.6e-14 50.7 4.6 1 35 747 780 747 781 0.98
Sequence Information
- Coding Sequence
- ATGAATCGGTCCACGACCATGTGTAACGTGCCGCCCAAATTTCACAAGCTGTGCCGGCTCTGTCTGGTCGCCGTCGCCGACTGTGACCTGGCCGAGTCCGCGGTCACCTACGGCCAGCAGCAAACAACAGAGAAGAGCAGCGCTGGGCGCAAAAAGCAGAATGGTGCTACCGAGGTGGTCGTGATTGATCAGAACTCGGCCGCAGCCACCAGTGGTGAAGGAGGTGATGGTGGCGGTGGTGGGGGCCTCCTAAGTagttccagcagcagcagcagcggaagtTCCAGCAATTCTAGCTCGAGCTCCAGCTCCAGCTCGAGCAGCAGCAGTGCTAGCGATGATGAAGATTACGACGAGGACGATTTCTTCGGCGAAGGCGGAACGGACGGGACGAACCTGGCCAAGCGGATACGGACGTGTCTATCGATCAAGATAACACCGAAAGATGGCCTGCCAACGGTGGTGTGTAGTTCCTGCCGCGAACAGCTGGAGACCTGCCACCGGTTCCGACGAGTGGCGCACAAGACGCAAAAGTCACTGCAGAGCTTCCTCAGCTACGCCGCCAAACTGAGCGGAAGTGCACAGgaaatcCTCTCGCAGTCGTCCGAGAAGCTGGAACACCTGATCGCCTCCTCACCTGCCTCGTTAGCCGCGAAAGCGTCCGCCGAGCAGGATGCGATAGCAGCGTTACAAGCGTTACGCAACAATAACAATCATACAAAGCCAGTTACCTCAGTACTTAGTAAAACGCATCTCGAGAACCTGCACGCAAATTCAGTATCTGTGATCCCGATTGAGAGCATGAAAATCAGtcaccaacagcagcagcagcaacaacaccaTCAACAGCCGACGATCATTCATCATCAAACGATAcacctgcagcagcagcagcagcagcatcaaccAAAACAGCAACCGTTGATCCAGGTCAAGAACCTGACCCAGCTCCAGCAGGAACATCTGGAGACGGCCGCGGTGTTGATGGACATTAGCAAAAAAGTGATAATCTCGCCACCCAGCTCGAACCCGCAGTCGCCAAGTTTGATTGCCGCcgaacagcaacagcagcagcagcagcaaaagttgcaacaacaacaacaccatcaacagcagcagcatcaacaacagtatcaaaccatcaacaacaacaatcagtcGCAACTACAAAGTATTAAATCTTCTGTGATAAAGCCGCACGACTTTGCCCATCAGAACCACCTGAAGCGCTCGCCGAGCAGCGAAGAGATGGACCTCACGATGAAGCGCGTCAAGGTGGAGCCGAACATCCTGTCGCCGACGCTTCCGGCGACCACGCTGGTCAAGAAGAACGTCATCAAGCGCGAAAACCTGGACGCGATGGACTTGGGCGGCGGCACGCTGGTCGATGACCATGCCAGCCAGCACAGTGACAGCGCCGACAGCAGCGATTCGGGCCGGCTGCAGATGGACATTTCGTCGCAGGACGCCGGTTCGGAGTGCACCACGGATGAGATTAAGCGGTCGAAcaacaataataacaacaaccaTCATAACAGCCAGTTGGACCACATTGGGCGGGAAACGCCGGACAGCTTGAACTCGCTCGAGGAACAGCAGCACCTGCAGCAGGCCCAGATTCACCTGGGGCAGCAGTTTAGCGCGTTGGCCGATGGGGCCGATCCGGCCACGACGCAGCTGTGGCAAGCGCTGGCGCATAATACGAatttgATTGTAAATGGTGCCGGAAATGAGGCGACCCAGCTTCTCCGGAAGATGATCAACGCACGAACACTTGGCCTTCAGTTTTCGCCGTCCATTCAGCTAACGCCCGGAGTGTCGCTCATGAAGCAGGCCGAAGCGAACCGCACGATCAACCAGGGTCGCCGGAAGCAGTCCTGTCCGATCCGAACGACGCCCGTGGAGGGCAACTCGCCCAACACCACGATGGAAGCCTTAAAGTTGACCAACAAGTCCGGCGTCACAACGGTAGTTACCAACAGCAGCGGTGGCGGCAGTCCAATCAACCTGGACGCCTCCTCGCACCCCAATCAGCTGAACCGTGCCAACATCCTGTTCCGAACCAAAACCGTGGTGGACAGCCCACTGCCCACGACCACCATCGAGCCAAACAGCGGCGCCGCCAGTCCGCAGCTGCTGAAGAACGTCCCAACTCCGCAGCAGTCGCAAAccccgcagcagcagcaaagtCCCCAGAACCAGAACTCGCAGCAAAACTCCCAGCAGAAGGACATGTCCTGCACCAACTGCGGCACCACCACGACCACCATCTGGCGGCGGAACATCCGCGGCGAGATGGTGTGCAACGCGTGCGGGCTGTACTTCAAGCTGCACGGCGTCAACCGGCCGCACACGATGCGACGGGACACGATCCACACGCGGCGGCGACGCCCCAAGGGCGACAAGTCCACCCGGAGGAAATCCATCAAACAGGACGGTGCGACGGTGGAACCGATCGACAACGGCGTGGTGGAGGGTGCCGCTGACCTGCAGGCCCTGCAGAACCACAACCTGCTGATTGCGCTGCGGGATGCGGCCCGGGCGACACCACCCAACTTCCCGATGCCTCCCgcctTCCAGCACTACCTGCGGGTAACGCAGCAGAACTTTGACGCCAGCGGCGGTGGCGGCGTCGGCCAGGACATGGACGCCGGCGAGGACAGCGGCCCGGAGAACGACATCGACTCGTGCAACCTGCCGCTGAATCTGGTGGCGACCCAGCTGGGCAGCGACTCGTCGCAGCACTGA
- Protein Sequence
- MNRSTTMCNVPPKFHKLCRLCLVAVADCDLAESAVTYGQQQTTEKSSAGRKKQNGATEVVVIDQNSAAATSGEGGDGGGGGGLLSSSSSSSSGSSSNSSSSSSSSSSSSSASDDEDYDEDDFFGEGGTDGTNLAKRIRTCLSIKITPKDGLPTVVCSSCREQLETCHRFRRVAHKTQKSLQSFLSYAAKLSGSAQEILSQSSEKLEHLIASSPASLAAKASAEQDAIAALQALRNNNNHTKPVTSVLSKTHLENLHANSVSVIPIESMKISHQQQQQQQHHQQPTIIHHQTIHLQQQQQQHQPKQQPLIQVKNLTQLQQEHLETAAVLMDISKKVIISPPSSNPQSPSLIAAEQQQQQQQQKLQQQQHHQQQQHQQQYQTINNNNQSQLQSIKSSVIKPHDFAHQNHLKRSPSSEEMDLTMKRVKVEPNILSPTLPATTLVKKNVIKRENLDAMDLGGGTLVDDHASQHSDSADSSDSGRLQMDISSQDAGSECTTDEIKRSNNNNNNNHHNSQLDHIGRETPDSLNSLEEQQHLQQAQIHLGQQFSALADGADPATTQLWQALAHNTNLIVNGAGNEATQLLRKMINARTLGLQFSPSIQLTPGVSLMKQAEANRTINQGRRKQSCPIRTTPVEGNSPNTTMEALKLTNKSGVTTVVTNSSGGGSPINLDASSHPNQLNRANILFRTKTVVDSPLPTTTIEPNSGAASPQLLKNVPTPQQSQTPQQQQSPQNQNSQQNSQQKDMSCTNCGTTTTTIWRRNIRGEMVCNACGLYFKLHGVNRPHTMRRDTIHTRRRRPKGDKSTRRKSIKQDGATVEPIDNGVVEGAADLQALQNHNLLIALRDAARATPPNFPMPPAFQHYLRVTQQNFDASGGGGVGQDMDAGEDSGPENDIDSCNLPLNLVATQLGSDSSQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00401381;
- 90% Identity
- iTF_00401381;
- 80% Identity
- -