Cpip005771.2
Basic Information
- Insect
- Culex pipiens
- Gene Symbol
- pnr
- Assembly
- GCA_016801865.2
- Location
- NC:25284503-25627269[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9 8.2e+03 -3.0 0.1 23 27 156 160 153 162 0.62 2 2 1.4e-16 1.3e-13 50.7 4.6 1 35 748 781 748 782 0.98
Sequence Information
- Coding Sequence
- ATGAATCGGTCCACGACCATGTGTAACGTGCCGCCCAAATTTCACAAGCTGTGCCGGCTCTGTCTGGTCGCCGTCGCCGACTGTGACCTGGCCGAGTCCGCGGTCACCTACGGCCAGCAGCAAACAACAGAGAAGAGCAGCGCTGGGCGCAAAAAGCAGAATGGTGCCACCGAGGTGGTCGTGATTGATCAGAACTCGGCCGCAGCCACCAGTGGTGAAggaggtggtggtggcggtggtggGGGCGTCCTAAGTagttccagcagcagcagcagcggaagttCCAGCAATTCTAGCTCGAGCTCCAGCTCCAGCTCGAGCAGCAGCAGTGCTAGCGATGATGAAGATTACGACGAGGACGATTTCTTCGGCGAAGGCGGAACGGACGGGACGAACCTGGCCAAGCGGATACGGACGTGTCTATCGATCAAGATAACACCGAAAGATGGCCTGCCAACGGTGGTGTGTAGTTCCTGCCGCGAACAGCTGGAGACCTGCCACCGGTTCCGACGAGTGGCGCACAAGACGCAAAAGTCACTGCAGAGCTTCCTCAGCTACGCCGCCAAACTGAGCGGAAGTGCACAGgaaatccTCTCGCAGTCGTCCGAGAAGCTGGAACACCTGATCGCCTCCTCACCTGCCTCGCTAGCCGCGAAAGCGTCCGCCGAGCAGGATGCGATAGCAGCGTTACAAGCGTTACGCAACAATAACAATCATACAAAGCCAGTTACCTCAGTACTTAGTAAAACGCATCTCGAGAACCTGCACGCAAATTCAGTATCTGTGATCCCGATTGAGAGCATGAAAATCAGtcaccaacagcagcagcagcaacaacagcaacaccATCAACAGCCGACGATCATTCATCATCAAACGATAcacctgcagcagcagcagcagcatcaaccAAAACAGCAACCGTTGATCCAGGTCAAGAACCTGACCCAGCTCCAGCAGGAACATCTGGAGACGGCCGCGGTGTTGATGGACATTAGCAAAAAAGTGATAATCTCGCCGCCCAGCTCGAACCCGCAGTCGCCGAGTTTGATTGCCGccgaacagcagcagcagcaacagcaaaagTTGCAACAGCAACaccatcaacagcagcagcagcagcaacatcaacagtatcaaaccatcaacaacaacaatcagtCGCAACTACAAAGTATTAAATCTTCTGTGATAAAGCCGCACGACTTTGCCCATCAGAACCACCTGAAGCGCTCGCCGAGCAGCGAAGAGATGGACCTCACGATGAAGCGCGTCAAGGTGGAGCCGAACATCCTGTCGCCGACGCTTCCGGCGACCACGCTGGTCAAGAAGAACGTCATCAAGCGCGAAAACCTGGACGCGATGGAGTTGGGTGGCGGAACGCTGGTCGATGATCATGCCAGCCAGCACAGTGACAGCGCCGACAGCAGCGATTCGGGCCGGCTGCAGATGGACATTTCGTCGCAGGACGCCGGCTCGGAGTGCACCACGGACGAGATTAAGCGGTCGAAcaacaataataacaacaaccaTCATAACAGCCAGTTGGACCACATTGGGCGGGAAACGCCGGACAGCTTGAACTCGCTCGAGGAGCAGCAGCACCTGCAGCAGGCCCAGATTCACCTGGGGCAGCAGTTTAGCGCGTTGGCGGATGGGGCCGATCCGGCCACGACGCAGCTGTGGCAGGCGTTGGCGCATAATACGAATTTGATTGTAAATGGCGCCGGAAATGAGGCGACCCAGCTTCTCCGGAAGATGATCAACGCACGAACACTTGGCCTTCAGTTTTCACCGTCCATTCAGCTAACGCCCGGAGTGTCGCTCATGAAGCAGGCCGAAGCGAACCGCACGATCAACCAGGGTCGCCGGAAGCAGTCCTGTCCGATCCGGACGACGCCCGTGGAGGGCAACTCGCCCAACACCACGATGGAAGCCTTAAAGTTGACCAACAAGTCCGGCGTCACAACGGTAGTTACCAACAGCAGCGGCGGCGGCAGTCCGATCAACCTGGACGCCTCCTCGCACCCCAATCAGCTGAACCGTGCCAACATCCTGTTCCGAACCAAAACCGTGGTGGACAGCCCGCTGCCGACGACCACCATCGAGCCAAACAGTGGCGCCGCCAGTCCGCAGCTGCTGAAGAACGTCCCAGCTCCGCAGCAGTCGCAAAccccgcagcagcagcaaagtcCCCAGAACCAGAACTCGCAGCAAAACTCCCAGCAGAAGGACATGTCCTGCACCAACTGCGGCACCACCACGACCACCATCTGGCGGCGGAACATCCGCGGCGAGATGGTGTGCAACGCGTGCGGGCTGTACTTCAAGCTGCACGGCGTCAACCGACCGCACACGATGCGACGGGACACGATCCACACGCGGCGGCGACGCCCCAAGGGCGACAAGTCCACCCGGAGGAAATCCATCAAACAGGACGGTGCGACGGTGGAACCGATCGACAACGGCGTGGTGGAGGGTGCCGCTGACCTGCAGGCCCTGCAGAACCACAACCTGCTGATTGCGCTGCGGGATGCGGCCCGGGCGACGCCACCCAACTTCCCGATGCCTCCCgcctTCCAGCACTACCTGCGGGTAACGCAGCAGAACTTTGACGCCAGCGGCGGTGGCGGCGTCGGCCAGGACATGGACGCCGGCGAGGACAGCGGTCCGGAGAACGACATCGACTCGTGCAACCTGCCGCTGAATCTGGTGGCGACCCAGCTGGGCAGCGACTCGTCGCAGCACTGA
- Protein Sequence
- MNRSTTMCNVPPKFHKLCRLCLVAVADCDLAESAVTYGQQQTTEKSSAGRKKQNGATEVVVIDQNSAAATSGEGGGGGGGGGVLSSSSSSSSGSSSNSSSSSSSSSSSSSASDDEDYDEDDFFGEGGTDGTNLAKRIRTCLSIKITPKDGLPTVVCSSCREQLETCHRFRRVAHKTQKSLQSFLSYAAKLSGSAQEILSQSSEKLEHLIASSPASLAAKASAEQDAIAALQALRNNNNHTKPVTSVLSKTHLENLHANSVSVIPIESMKISHQQQQQQQQQHHQQPTIIHHQTIHLQQQQQHQPKQQPLIQVKNLTQLQQEHLETAAVLMDISKKVIISPPSSNPQSPSLIAAEQQQQQQQKLQQQHHQQQQQQQHQQYQTINNNNQSQLQSIKSSVIKPHDFAHQNHLKRSPSSEEMDLTMKRVKVEPNILSPTLPATTLVKKNVIKRENLDAMELGGGTLVDDHASQHSDSADSSDSGRLQMDISSQDAGSECTTDEIKRSNNNNNNNHHNSQLDHIGRETPDSLNSLEEQQHLQQAQIHLGQQFSALADGADPATTQLWQALAHNTNLIVNGAGNEATQLLRKMINARTLGLQFSPSIQLTPGVSLMKQAEANRTINQGRRKQSCPIRTTPVEGNSPNTTMEALKLTNKSGVTTVVTNSSGGGSPINLDASSHPNQLNRANILFRTKTVVDSPLPTTTIEPNSGAASPQLLKNVPAPQQSQTPQQQQSPQNQNSQQNSQQKDMSCTNCGTTTTTIWRRNIRGEMVCNACGLYFKLHGVNRPHTMRRDTIHTRRRRPKGDKSTRRKSIKQDGATVEPIDNGVVEGAADLQALQNHNLLIALRDAARATPPNFPMPPAFQHYLRVTQQNFDASGGGGVGQDMDAGEDSGPENDIDSCNLPLNLVATQLGSDSSQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00402440;
- 90% Identity
- iTF_00402440;
- 80% Identity
- -