Basic Information

Insect: Culex quinquefasciatus
Gene Symbol: L
Assembly: GCA_015732765.1
Location: NC:487186-507146[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.1e-05 0.0006 19.9 2.0 1 23 137 159 137 159 0.98

2 18 0.9 26 5.3 5.7 1 23 165 187 165 187 0.98

3 18 4.9e-07 1.4e-05 25.0 3.1 1 23 193 215 193 215 0.99

4 18 2.3e-05 0.00065 19.8 0.3 1 23 221 243 221 243 0.98

5 18 0.22 6.2 7.2 0.5 2 23 348 370 347 370 0.96

6 18 0.32 9 6.7 0.2 1 23 517 539 517 539 0.95

7 18 2.3 66 4.0 0.3 1 23 549 571 549 571 0.89

8 18 0.002 0.057 13.6 1.1 1 23 579 603 579 603 0.92

9 18 0.0068 0.19 12.0 0.1 1 23 608 631 608 631 0.93

10 18 0.016 0.46 10.8 1.5 1 23 638 661 638 661 0.98

11 18 0.0028 0.08 13.2 2.0 1 23 693 715 693 716 0.96

12 18 1 29 5.1 0.2 1 23 925 949 925 949 0.93

13 18 0.0026 0.073 13.3 0.2 2 23 958 980 957 980 0.96

14 18 0.0066 0.19 12.0 0.1 1 23 986 1008 986 1008 0.98

15 18 0.28 7.9 6.9 2.6 2 23 1016 1037 1016 1037 0.96

16 18 1.8 50 4.4 1.4 2 23 1168 1189 1168 1189 0.95

17 18 0.0026 0.075 13.3 0.3 1 23 1199 1221 1199 1221 0.97

18 18 0.0021 0.059 13.6 1.6 1 23 1228 1250 1228 1250 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.1e-05	0.0006	19.9	2.0	1	23	137	159	137	159	0.98
2	18	0.9	26	5.3	5.7	1	23	165	187	165	187	0.98
3	18	4.9e-07	1.4e-05	25.0	3.1	1	23	193	215	193	215	0.99
4	18	2.3e-05	0.00065	19.8	0.3	1	23	221	243	221	243	0.98
5	18	0.22	6.2	7.2	0.5	2	23	348	370	347	370	0.96
6	18	0.32	9	6.7	0.2	1	23	517	539	517	539	0.95
7	18	2.3	66	4.0	0.3	1	23	549	571	549	571	0.89
8	18	0.002	0.057	13.6	1.1	1	23	579	603	579	603	0.92
9	18	0.0068	0.19	12.0	0.1	1	23	608	631	608	631	0.93
10	18	0.016	0.46	10.8	1.5	1	23	638	661	638	661	0.98
11	18	0.0028	0.08	13.2	2.0	1	23	693	715	693	716	0.96
12	18	1	29	5.1	0.2	1	23	925	949	925	949	0.93
13	18	0.0026	0.073	13.3	0.2	2	23	958	980	957	980	0.96
14	18	0.0066	0.19	12.0	0.1	1	23	986	1008	986	1008	0.98
15	18	0.28	7.9	6.9	2.6	2	23	1016	1037	1016	1037	0.96
16	18	1.8	50	4.4	1.4	2	23	1168	1189	1168	1189	0.95
17	18	0.0026	0.075	13.3	0.3	1	23	1199	1221	1199	1221	0.97
18	18	0.0021	0.059	13.6	1.6	1	23	1228	1250	1228	1250	0.95

Sequence Information

Coding Sequence: ATGGCCATGAGAATGCTGTACCGTGGGCCAAGTTCGCGACTGGAAACGTTGATCGAAAAAATTCAGCAAGGCAGCAAGGACTACTACTACCATCATCCGCTGACGATGATGAGCCAAGAACTCTACTCGTCGCACACGTCGTCCAGCTTTTCGCCGTCGATATCGGATGGCATGACGACGCCGAACTCGATCACCAACGACGGCGACCATCATCAGCATCAACCCGGATCGGCCAACGGAGGCACAGCAGATTCCGAGCAGGCACCGGCTGGACAGGACAAGCGTGGTGGCCATCAGCACCGacggcaccaccaccaccaccatcggtCGTCCTCCGCcgacaataataataaaataattaaaaataacaatcacacaaacagccacagcAAGAATAATGACGGCACTTATCGGTGTCAGTTTTGTGATAAAACGTTTCCCCGGCTCGGCTACCTGAAGAAGCACGAACAGAGCCATACCGAACATATGCCATTCAAGTGTGAATACTGCGCTCGTTTGTTCAAACACAAGAGGTCACGGGACCGTCATACCAAGCTGCATACGGGAGATCGGCGATACCGGTGCCCTCACTGCGAGGCGGCATTCTCCAGAAGCGATCACCTGAAGATCCACATGAAGACGCACGACAACCAGAAACCTTTCCAGTGTACGATCTGTAATCGGGGCTACAATACGGCGGCGGCCCTGACCAGTCACATGCAGAACCACAAGAAGCAGATTGCGCTGACCGGGAGTCCAAACCTGACGTACAGTCCTCGGTCGACCAGTTCGCTGTCGAGCAGTGCGTCGAATCCCAAGCGGAAGTTTTCGCCGTATGAACAGAACCTGATGATGATCAATCGCTCCAAGTTGCTCAAATCCGGTGAACTCACTTGCATCTACTGCACGCGAACAGATTTCGCAAACCTGGAGCAGCTGGGAGCTCACGTACAAACCATGCACAGTAATCTACTGCTTAATGAGAACAACTTTCATCGTATGCCGACCTCGCCCGATGCCCTCCTTTCGTATCCGCCAATATCCTGCGAGTTTTGCACCATGAAGTTCCCTACTGTTCCGATGATGTTCAACCATCTCAAGACAACCCATCTGGACCGGATCAACAGCCCAAAGAGCTATCTGGAACAGTTCAACAAGAATCTCATGAACACGTACACCTCGTTCTACGGATCATCAGCCTTCCTCGAAGACAAACACGAGCCCAACGCGGAAGTTAAAAATGAACGTCCCAGCAGTGAGAAAAGCGTCCGGGATGAAAACGGCAACGAAGAGGCGACCGCAGCTTCACCACCACCAATAGAACCCAAGGTCATCAAACAAGAGAAAAAGGATGAAAACGACAACTCCCAGGACGCTGCCGATCACCAGGAACAGCTCGCTCCAACCGACCTGAGTCAACCGCGCATGAAGCGACTCAAGCTGGAGCACGAGAACCATTCGACCTCGTCCTCCTCAAGTCGAGATATAACCCGCGAAGCGGAAAAAGACACCACCCCAGTGTCGAACCTATCAACCGCTCCGGGCGCATATCTCTGCAACCAGTGCAACGCCGCCCTGCCCGATTTCGAGTCCTTCCGAACCCATCTGAAAGCTCACCTCGAGCAGGGCTCAACGGCGTCCTCGTTCGTGTGTCAACAGTGCGGCGCCACCCTGGCCGACCAGCAGGAACACGAAAAGCACGTCACCGGGCACTACCTGGTGGCCGGAGCGGAGTACCAGTGCGAACCCACCTGCAGCAAGTCGTTCGCCAAGGCCGAAGAACTGCACAAACATCTGTACGACTCGCACACCCAGGTCCTGTACAAGTGCGTGCTGTGCGGCGAAACCTTCGACACCAAGGTCACCATCCAGGTCCACTTTGCCGTGGCCCACTCGAACGAGGTCAAGCTGTACCGGTGTTCTGCTTGCGCCGAGGTGTTCCGCGCCGAACGGGACTTTAGACATCACATCCGGACGCGTCACATCACTTCCGGTGCGGTTCAGTGCGTCTTCTGCCGCGTCGTGTGCACTTCCGAGCTGGAAATGCAGTTCCATCTGGCAGCCCACGCTCGCAAGTTCAAATGTCCCGCCTGCCCGGAATCGTTCCACGTCGAGTTCCTGCTGGACCGTCACATGCAAACCCACCACAGCCAGAAGGAAATCTCGAACGCGGCTGCCGCGGGAGCTTCAAGCACCACGGTCAACAACCAACCCACAAACAGCACCAACCTGGACTATCTCCAACTGCACGGACAAATGGCCGCGGCAGCAGCGGCCGCCAACTGGCAAAATCTGTACGCCGCCAACAAGTTCTACAACCCGCTGCACGTGGACACGCTCAACCCGATCAAACATCCCAACTTCCTGCACGGCTTCTACGACAGCCTCAACAAGTCCCACGCCCAGCGCTACCTGGACCAGTCCAAGAAGGGCTTCGTCAgtcccaacaacaacaacaacaactcccAACAGTCCAAAGCGGCTCTTTTGAACCTGTACAACCAGCAGCGTTCGGCGGCCATGAACGGTCTCTACTCGCCCGATCACAATCCCGCATCCCAATCGGCCCAAACCGCCGCCAACGCTGCCCCCGCGACGACCAACAAATCTCCCCAGATCTACTCACCAACGGCTTTGCTGCACCGCTACGGACTCAACTCGTCCGGTTCCGGCAGTGGTTCGACAGCCAACAGCAACAACGGAAGCGCTTCGGCCGTTGCAGCACCGGAAAAGGCGACTTCCTCCAACACCAAGAACAACACCGTAAACTACTACAGCTGTGGAATCTGCGAGCGAACGGACTTTAGCACCGAGAACGAGGTCCAGACGCACCGTAAGATCGTGCACAACCTCAAGACTGGGGTGAGTCTGCGGTGTGCTTACTGCAGCGGGGACTTCCGGTCAAGAAACGAGCTGGAGAACCACATGAAAATCGCTCACAACACCGGCGGCAAGCACAAGTGTCTGATCTGCGACGAAATCTTCCCGTCACCAGCGGTCCTGGCGGAACACAAGCTGACCCACTGCAAGGTGGGCGCCTCCGGCCGATGCTCGCACTGTCCAACGACTCTGCCCGATGTGCACAGCTTCAAGGCCCACCTCTCCCAGCACATTCAACCGGCGTCGGCGACTTCCTCGACGTCGTCAACGGGGAAGAACGAATCCAACGGAACGAGTTCCGGCCAAGAACAGGAACGTTTCCCGATCCAGTGCATCTGCTGTCGCCAGACGCTCAACTCTGAGTTTGAGATTAGCTTGCATGCAAAATTCCACACCAAGTCCAGCGAAACCAACGAGAAAACGTGCGCCCTCTGTCTGGAACCGCTGGCCAACGGCCAGGACGCCAAGATCTGCGAAAGCTGCCTCAAGCGGCACAACTTTCCCTCGAAGCTGCTCTCAATCAACAACTTCATCAAGTCATCGTCGAACTCCACCGCGGAAGACCCCACCAGCCACCATCACCAACACCATCCGCCTCCCACTCTAAGTCAATCCCCCGCCCAGTGCAACCTGTGCAAGAAGCACCTCTACGACGGACAAAAGCTCCAGGAACACCTGATCGATCACACGTTCGCCGGCTGTGAAGATCGCGGCTTCGTGTGCTATCTCTGCTCATCGGTCTTCACCTCGTCCGGAGGACTGCAGACGCACATGGACCAACACGGTCCGCAGGCCAAGCCGTACGATTGTAACCACTGCGACGAAGCGTTCTTCTTCCGGGCCGAGCTGGAGCATCACCTGATTGACCACGAGCTGGGCAAGGTACATCTGCCGGCAGCGTTCGTCCAGGAGGAACACGCGCGGACGAGCCCGCCGGAGATTAAGCCGGAAATTGTCGAGGCGATCGTGGAGAAAACTACTCCAGCTGACGCCGATCCGGAAAGTGGTTCCGAACAGGAAGGGGAATCGTCGCTGGGGAGGAACCGGAAGTGA
Protein Sequence: MAMRMLYRGPSSRLETLIEKIQQGSKDYYYHHPLTMMSQELYSSHTSSSFSPSISDGMTTPNSITNDGDHHQHQPGSANGGTADSEQAPAGQDKRGGHQHRRHHHHHHRSSSADNNNKIIKNNNHTNSHSKNNDGTYRCQFCDKTFPRLGYLKKHEQSHTEHMPFKCEYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQIALTGSPNLTYSPRSTSSLSSSASNPKRKFSPYEQNLMMINRSKLLKSGELTCIYCTRTDFANLEQLGAHVQTMHSNLLLNENNFHRMPTSPDALLSYPPISCEFCTMKFPTVPMMFNHLKTTHLDRINSPKSYLEQFNKNLMNTYTSFYGSSAFLEDKHEPNAEVKNERPSSEKSVRDENGNEEATAASPPPIEPKVIKQEKKDENDNSQDAADHQEQLAPTDLSQPRMKRLKLEHENHSTSSSSSRDITREAEKDTTPVSNLSTAPGAYLCNQCNAALPDFESFRTHLKAHLEQGSTASSFVCQQCGATLADQQEHEKHVTGHYLVAGAEYQCEPTCSKSFAKAEELHKHLYDSHTQVLYKCVLCGETFDTKVTIQVHFAVAHSNEVKLYRCSACAEVFRAERDFRHHIRTRHITSGAVQCVFCRVVCTSELEMQFHLAAHARKFKCPACPESFHVEFLLDRHMQTHHSQKEISNAAAAGASSTTVNNQPTNSTNLDYLQLHGQMAAAAAAANWQNLYAANKFYNPLHVDTLNPIKHPNFLHGFYDSLNKSHAQRYLDQSKKGFVSPNNNNNNSQQSKAALLNLYNQQRSAAMNGLYSPDHNPASQSAQTAANAAPATTNKSPQIYSPTALLHRYGLNSSGSGSGSTANSNNGSASAVAAPEKATSSNTKNNTVNYYSCGICERTDFSTENEVQTHRKIVHNLKTGVSLRCAYCSGDFRSRNELENHMKIAHNTGGKHKCLICDEIFPSPAVLAEHKLTHCKVGASGRCSHCPTTLPDVHSFKAHLSQHIQPASATSSTSSTGKNESNGTSSGQEQERFPIQCICCRQTLNSEFEISLHAKFHTKSSETNEKTCALCLEPLANGQDAKICESCLKRHNFPSKLLSINNFIKSSSNSTAEDPTSHHHQHHPPPTLSQSPAQCNLCKKHLYDGQKLQEHLIDHTFAGCEDRGFVCYLCSSVFTSSGGLQTHMDQHGPQAKPYDCNHCDEAFFFRAELEHHLIDHELGKVHLPAAFVQEEHARTSPPEIKPEIVEAIVEKTTPADADPESGSEQEGESSLGRNRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00400893;
90% Identity: iTF_00400893;
80% Identity: -