Cqui000008.1
Basic Information
- Insect
- Culex quinquefasciatus
- Gene Symbol
- ZBTB26
- Assembly
- GCA_015732765.1
- Location
- NC:975130-978490[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.9 54 4.3 0.1 2 23 232 254 231 254 0.95 2 16 0.025 0.73 10.2 0.3 1 23 289 312 289 312 0.98 3 16 0.00062 0.018 15.2 5.0 1 23 326 348 326 348 0.97 4 16 0.46 13 6.2 0.2 2 23 364 386 363 386 0.88 5 16 0.015 0.41 10.9 0.6 2 23 422 443 421 443 0.97 6 16 4.3e-05 0.0012 18.9 0.6 1 23 475 497 475 497 0.97 7 16 0.00047 0.013 15.6 0.3 1 23 503 526 503 526 0.95 8 16 0.00015 0.0043 17.2 0.6 1 22 532 553 532 556 0.90 9 16 0.0019 0.054 13.7 0.1 1 22 562 583 562 583 0.96 10 16 0.15 4.3 7.7 1.0 2 23 624 645 623 645 0.88 11 16 0.033 0.93 9.8 7.4 2 23 652 673 651 673 0.97 12 16 3.1e-07 8.9e-06 25.6 0.8 1 23 680 702 680 702 0.98 13 16 0.00014 0.004 17.3 1.0 1 23 708 730 708 730 0.98 14 16 1.6e-05 0.00047 20.2 0.4 1 23 761 783 761 783 0.99 15 16 1e-05 0.00029 20.9 0.5 1 23 789 811 789 811 0.99 16 16 0.0031 0.087 13.1 0.2 1 21 817 837 817 838 0.94
Sequence Information
- Coding Sequence
- ATGCTTCTGCGGCACGTCATCCCGACCAACAACGATGTGGAGGAAATTTACATCGTCAAGCAGGAAGATGAGCAGACCGATCCGGCTGGCAACCCGCTGGCGGGCGGACCAGGGCCTAGTCGGTCCGGGTTGCATCCGACGGCGCTGCTCGAGAACGAGGACGTTGAAATCAAGGACGAACCGCTGAGCGTGCAGGGTAGCGAGGAGGAAGATGAAAAGTACGATCCCCCGGTTCCGCTGCTGCATGCACTTCCGGTCGAGGTGCGGCTGGTTGAAGATTTGCCGAAAAAGTTGGAGGCTGCGATCAAAAAGGAGAAGGAAGTGGAGGAGCAGCAGCAGACGAGGAAGTCTCCGGTGGAACCGGTAAAAGCGGTCAAGCCGAGCGTGAAACAGGAGAGGGACTCCAGCTCGGACGGTGACTGGGGACAAGATGACTTTGAGCCACTGGCTAAGGAGGTGGTGGTCAAGAGGAAGCGTGGCCGGCCACCGAAGAAAAAGGTTGAGGTGAAGAAGGAAAAGTCAGCTGGTTCTGATAGCGATATGGACGCGGACGATGTGGATGATGACGATTATAGACCTCCAGCGGGTAGTCCGGTCAAGAAGGAGCGCAAACGAGGTCGCAAGAAAAAGATCAAGCCGGATCCGGATGGGTTCGATAGCGATGCTTCCAACGTGGAAGAAACGGAAATAGTCAAGTGCTTCATTTGCGTGATTGACCTGAAGGAGGCCGATCTGCTGGACAAACATTTGCGCCAAAAGCACAAGCACATGCTTCCGTTTAGCTGCGTTACTTGCGTGGGACGTAGGGTAACACGGTTGAAGGATTTGAACTTGCACTTTCAGCAGCATGACGAGACTAGGAAGTATAAGTGTCTCTATTGTGCGGCGCGGTTCCCATCGCCACAGGGACAGAGCAGCCACATGCGTCGGATGCACAGCGAGAAGTACAACACCGATATGGATCGCTATCGGCGGTTCATGTGCCGCTTTTGCGATAAAAAGTTCACCAAGAAACACGACTTGGAAATTCACGAGAAGCGTCACATCGCGGAGGAGTCGAACGATCCGGCAGTTATGCGACGAGCTCTGAAGTGTTacatttgcaacaaatttgtgGGGAAGAATCGAGATGATCTGAACGCACACGTCGCCACGCACGAAGACTGGCTTCCGTATCACTGCGAAAAGTGTGACAACAAAAAGATTTGCACCGTTCGAATACTTTGCGAGCACCTGCGGCAGCACCAGGAGGGACTGGCGGTTAAATGCGTTTACTGCGATGAACGGTTCGTCAGTTTGGGCGAATGTCAGGCTCACGAGCGGACTCACGCGGCGGAGAAGGAAGCGCACGAAATTGAGGACGCGAAAATGATCGCGGAAATGACCGGAAACAGCGTCGTTGTGGTGGATGGCGTCAAACGGTTCCAGTGCGGCAAGTGTGACCGCTCGTACGCGTTGTCCAGCAGTCTGCGGAAGCATCAGGGTGTCCATGCCAAGGGAAATGCGTTCGTTTGTTCAAAATGTGGCCGAGCGTTCATGAAGGCTTCGTCGTTGGCATTGCACGAGAGTCGTAACCACCTGGAAGGAGGAAGTTTCACGTGCGAAGGTTGTGGTAAAGTTTTCCCGACAATTGGACACCTGCTGGATCACCGAACCCGAACTCAGCACTTTGCCGGAAAGCCGTTCATTTGCGAGGGTTGTACGACCACGTTCGTGCTGCAGGAAGAGCTGACGGAGCACCAGAAGACGTGCACCGAAACGGAAGCGAATCGAGCGTGCTTCTGCGGTCTCTGCGCCAACAATTTCCCCTCTCTGGCGATTGCGATGGAACACGTCAAGACCGAGCACGAGCCGGAAATACCGGAAACCAAGTGCAGATATTGCGATCTGACCTTCAGGGACTCGGAGCGAATTGTGGAGCACGAATTTAAGCACACTCTGCCGGGAATTATGACCTGCAAGATGTGCAACCGGATCTTTAAGCACTTGAAGAATTTGCAGTGCCACATGAAGAACCATGGCAAGGTGGCGATTCCGTTCATGTGCGATATCTGCGGCAAAACGTTCACCCAGAAGGGCACGCTCACTATTCATACGCGTCTTCATACGGGCGAGCGCCCGTATACCTGCGTACTGTGTCAGAAGGGCTTCGTCGACAAGAATGAGATGAGGAGACACTATAATATGCATTTCAATCCACAGAGCAAGCTGTACATTCCGAACGCGCAGCAGATCGCCGCCCCGGTGGACGTCGGAGCGCAGGGCAAAAAGTACAAACAGTACACGTGCAAGATCTGCGGCCGCCAGCTGACGACGTCGACGGCGCTGGCCAAGCACATCACAACGCATACGGGTGAAAAGAAATATCAATGCGAATTCTGTGACAAACGCTTTGCCCAAGGAGGGCAATTGACGGTTCATCGACGAATCCACACCGGCGAACGTCCGTTTGCGTGCGAGAAATGTGGCCAGCGGTTCGTAGGAGGCAGCAATTACAAGCGTCACGTCAAGCAGGGCATGTGTAAGGCGCTAACTGCAGGAGCGATCGCTTCCGGTGAAGGCGGAACAGCGAACATGCAcccgcagcaacagcagcagcagctggagCACCCGTATCTCGGCGGTGCCGAGGTGATTGGAAGTTCGGAACTACGGATCTACCCCGACGAAAAGGAAATGCACTAG
- Protein Sequence
- MLLRHVIPTNNDVEEIYIVKQEDEQTDPAGNPLAGGPGPSRSGLHPTALLENEDVEIKDEPLSVQGSEEEDEKYDPPVPLLHALPVEVRLVEDLPKKLEAAIKKEKEVEEQQQTRKSPVEPVKAVKPSVKQERDSSSDGDWGQDDFEPLAKEVVVKRKRGRPPKKKVEVKKEKSAGSDSDMDADDVDDDDYRPPAGSPVKKERKRGRKKKIKPDPDGFDSDASNVEETEIVKCFICVIDLKEADLLDKHLRQKHKHMLPFSCVTCVGRRVTRLKDLNLHFQQHDETRKYKCLYCAARFPSPQGQSSHMRRMHSEKYNTDMDRYRRFMCRFCDKKFTKKHDLEIHEKRHIAEESNDPAVMRRALKCYICNKFVGKNRDDLNAHVATHEDWLPYHCEKCDNKKICTVRILCEHLRQHQEGLAVKCVYCDERFVSLGECQAHERTHAAEKEAHEIEDAKMIAEMTGNSVVVVDGVKRFQCGKCDRSYALSSSLRKHQGVHAKGNAFVCSKCGRAFMKASSLALHESRNHLEGGSFTCEGCGKVFPTIGHLLDHRTRTQHFAGKPFICEGCTTTFVLQEELTEHQKTCTETEANRACFCGLCANNFPSLAIAMEHVKTEHEPEIPETKCRYCDLTFRDSERIVEHEFKHTLPGIMTCKMCNRIFKHLKNLQCHMKNHGKVAIPFMCDICGKTFTQKGTLTIHTRLHTGERPYTCVLCQKGFVDKNEMRRHYNMHFNPQSKLYIPNAQQIAAPVDVGAQGKKYKQYTCKICGRQLTTSTALAKHITTHTGEKKYQCEFCDKRFAQGGQLTVHRRIHTGERPFACEKCGQRFVGGSNYKRHVKQGMCKALTAGAIASGEGGTANMHPQQQQQQLEHPYLGGAEVIGSSELRIYPDEKEMH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00400844;
- 90% Identity
- iTF_00400844;
- 80% Identity
- -