Cqui010153.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Culex quinquefasciatus
Gene Symbol
YLR339C
Assembly
GCA_015732765.1
Location
NC:25034063-25064184[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 2e-05 0.00057 19.9 1.9 2 23 192 213 191 213 0.97
2 26 2.4 68 4.0 3.7 2 23 218 242 217 242 0.87
3 26 5.2e-07 1.5e-05 24.9 0.6 2 23 300 321 300 321 0.98
4 26 0.015 0.41 10.9 0.2 2 23 382 403 381 403 0.97
5 26 0.031 0.89 9.9 3.4 1 23 474 497 474 497 0.95
6 26 5.1 1.5e+02 2.9 0.1 1 21 534 554 534 557 0.85
7 26 0.00014 0.004 17.3 4.0 1 23 572 594 572 594 0.95
8 26 0.0023 0.066 13.5 7.1 1 23 601 623 601 623 0.99
9 26 4.8e-05 0.0014 18.8 1.8 3 23 638 658 636 658 0.96
10 26 2.7e-05 0.00078 19.5 1.4 1 23 664 686 664 686 0.99
11 26 7.1e-06 0.0002 21.4 3.1 2 23 693 714 692 714 0.97
12 26 1.2e-06 3.3e-05 23.8 1.3 1 23 720 742 720 742 0.98
13 26 0.00027 0.0076 16.4 0.1 1 23 748 772 748 772 0.93
14 26 0.26 7.3 7.0 0.2 3 23 1657 1677 1655 1677 0.96
15 26 4.5e-05 0.0013 18.8 2.9 2 23 1684 1705 1683 1705 0.98
16 26 0.056 1.6 9.1 0.3 3 23 1711 1732 1709 1732 0.95
17 26 0.00012 0.0034 17.5 0.3 3 23 1769 1789 1768 1789 0.98
18 26 0.18 5.2 7.5 1.1 3 23 1864 1885 1863 1885 0.97
19 26 0.26 7.5 7.0 1.2 3 21 1893 1911 1893 1912 0.97
20 26 4.9e-05 0.0014 18.7 1.2 1 23 1971 1993 1971 1993 0.98
21 26 8.8e-07 2.5e-05 24.2 3.0 1 23 2000 2022 2000 2022 0.98
22 26 1.1e-06 3e-05 24.0 0.3 3 23 2040 2060 2039 2060 0.98
23 26 3.5e-05 0.00099 19.2 2.4 1 23 2066 2088 2066 2088 0.99
24 26 4.8e-06 0.00014 21.9 2.2 3 23 2096 2116 2094 2116 0.97
25 26 1.4e-06 3.9e-05 23.6 1.1 1 23 2122 2144 2122 2144 0.99
26 26 0.0042 0.12 12.6 0.0 1 22 2150 2171 2150 2174 0.92

Sequence Information

Coding Sequence
ATGGACCCGTCCGTCGACTTCGATCTGGCCAAACTGTGCCGGTGCTGCCGCAAGCGGGGCTCGGGCCTGCAGTCCATCTTCACCTTCGTCTGCAAATCCGGTGCCGCCACACTGCACGAGATGCTGCTCAGTTGCATCCCCCAGTCGCAGCTCCAACCGGACGACGGTCTGCCGGAGCAGCTGTGCTCGCGGTGTATCGCCGCCGTTAGCTCGGCGTACCAGTTCCGGAAGCGGTTCGAGGAGAGCGATGGAATTTTGAGGGCGTATGTGAAGGAGAGGGGTCGACAGGGGGAGAGCTTGCTTGGGGGGATGTCTGTGAAGGTGGAACTGGTGGACATTAAGGCGGAGCAGATTATCGTTGAGGCGAATCCGCTGGTTGAGGAGGAGCAGGAGGAACAGGTGGAACCCGTCAAGGTGGAGCTGCGAATGGATTCCGATGACGGAAGTGAATTTGTGGGGGATGATAATGTGGACTTTAGTTCGGAGGAGGAGCAGTACGAGGAGAAGCCCAAAGTAAGTGGTGAGAAGAAAAGAGTCAGGAATCGGAAGAAGCCGGATCCGAGCGAGTACAAGGAATGTCCCACGTGTGGGAAGAAGTTTGATACAAAGTATCACTTGGACAGACACGTGAGGGCGCACAAGAATGACACCCAGTGCGAGCATTGCGAGAAGCGATTCTCGGCCATGGATTACAAGGACTATCGGAAGCACATGCTGACGGATCATCCTGGGATGGACATTCAACCGCACAGGAAATCGACGGACAAGTCGGAAGCTCGAGACGACGAGGGTAGTGATAATGTGCCAAGTGCCAACGAGCCGGACGAGGACGACGAAGACAAGCCCGCTGGTAAAAAGAAAAGAGCCGGGAAACGGCGAGGTGCGAACGAGTACCGGGAATGTCCAATATGCGGCAAGGGTTTCCCCTCGAAGTATCACCTGGAGAGGCACGTTAAAACGCACAACAACGACACCAGGTGcgagttctgcgaccaacaGTTCTCCGCCACGGCTTACAAGGAGTACTGCGAGCACATGCAGCTGGAACATCCCGGAATGCCGGTTCAACCGCACAAGAAGACAAAACCCATTGATAATTCGCTGGTCGAAGAATTCTTCAAAAGTATTCAACAAAAGGAAATTTCCTGCAAGCTGTGCGATGCCAAACTTGAGCGGATCGCAGAGTTGCGGAACCACCTACGAACTCACTCCGATCCCAGCACGCTGATCAACGCAGGCATCCCGACAAAGACGTTCCTCTTCGCGGAGGGTTACGTCCCGGACAATTACCTCGACATCTTGGTTCAGCAAATCAATAACTGGGACGTACAACGCTTCTACCAGATCGTCGAACCCACCGGCGAAGAACTCACCTTAAGCGATTCCGACTCCGACCCGGAAGACCTCGTCCAACGAGTCCACACCTGCTTCACCTGCCACCAGAGCTTTCCCCGGCTCAAACTCCTCACCGACCACGCCGCCACCAGCCACAACCCCGAACAACTCCTCACCTGCCAGCACTGCCAGCAGCAAGGCTTCCCAAACAACACCATCCTAGAGCGTCACCAGCGGCAGCAGTGCGCAAACAGCGCCAAAAAGTTCCTCTGCGCCATCTGCAACACCAAGTTCATGTGGCAATCCAGTCTCGATAAACACGCCGCCGCCAACCACGCCAACCCGTCCGCCGATCCGCAGCATGATTCCGGCAAGCGGTTCCTCTGCCCGATGTGCAACAAGGGCTTCACCCAGATGCACCATCTCAAGCGGCACGTCCGCGGCCACGTGCCGTCCGAGAAGAAGTTCGAGTGTCCGGAGTGTCACCGGAAGTTCCACCGCAAGGACAATATGAAGTTTCACATGCGGACGCACCAGCCGAAGCGCGAGGACGAACCGCCCAAGCAGACGCACCTGTGCTCGCTGTGTGGACGGGGGTTTACGTCGAATTACAACTATGTGGTTCATATGCGACGGCACACCGGGGAGAGGCCCTTCAAGTGTGATCAGTGTGATAAAGCTTTCCCGCGTTCGCTGGATTTAACGTATCACAAACGGACGCACACTGGCGATAAACCGAGCGTTTGCAACATATGTGGCAAGGcattctcgcgccaccACCGCCTGGTCCGTCACATGCGCGTCCACACCGGCGCCCGGCCCTACGCTTGCACCTACTGCGACCGTACCTTTACCCAGTCCAACGACCTCACGCTGCACATCCGACGCCACACCGGCGAGAAGCCCTACTCCTGCCCCATCTGTAACGAGCGCTTCATCCAGGGAACGGCCCTGCGCGCCCACCAGCGCTCCGTCGGCCACATCACCGAGGAGACACTGCTTCCGGTGAGCAACTACGGGCGCAGTTTGCTGGAGGGTTGTCGTAGTTTAGCGAATCGGAATTCGTCGGATGCCCCAGCGGAGGCGCAGCTTGCCGTCCTTGAGGTAGATTTCGGCGCGGCTTTTGAGCAAAAAGTCCGGCATGAAGAGGACTCGTTCGAGCGTGCGGCCGCTCTGTCGCAGGGTCCACCCGTTGGCGTCGACCGTGAGCAGTTCGACAAAGTACTCGTGGCACGTGGGAGGGTCCGCCGGGGGACCGTCTTCGCACTGGCCAATCGTGACGGCCATGTGCCTGCGCTCGTGTTCGGTGGCGCCCTGGTTCAGTCTGACTTCGAGTCGCCAAGCGATTTTGTTCGCGTCCAGCAGCGTTTGGGATTGAGTCGTGCGGCTGGTCAGGAAGTCCGGGATCGTGAGGTGGCCCTCGACGAACTTGGGCATCCGTTTGAGGTTGTGATCAGCAGGAATCTGCTTCAGTCTTTTACCCAACACGAGGGTGCTCCGCTCGGCGTCCGGATCCAAGGGGACTATGGCCACGCGCAGCTTGAGAGTGCCGTCCGCGGCAAAGTAGCCATCGTCGCGCAGCTGGGACAAGGCAGCGAGCGTGCTGCAGTAGACCGTCCGGAGGCGACTCACTTCCATCGAATCGCTGCGCTGGAAGCTCTTGAGTGGAGATTCGTGGATGAAGCGCACCAGCAGCTGGAAACGTCCCATCACGCCACGGCACTGGCTCGTGTCGACGTCCAAAATCAACCAGTCCATGTCCTTGCGGAGGCGCAACTGCCACGGAACACCGTACTGATCACGGATGGTGGTCGCGCTCGTGGCATCTTCCACGATTCCCACACTGATGATCGACGGAACCTACTAGGAGTGGTCGTACTGCGGCAGCGGCACTTTCACCTTCGCCGGCTCCACGTCCTGCGCCAGCCGCGCCACATCGAACAGCTTCATCAGCTGATCCTGCTGCTTGGCCTGCAGGCTCTTCAGCAGCTGCCCACTTTCGTTCCGGAGCGCCCGCTCGACCACCTTCTGCATCTGCTTCTTCGGGTCGAGCGCGCTCATAATTTCCGCAAGCTCCCCCGCCAGCACCGCATTTTGCTCCGGCGGTTTTTCCTTCGCTTCCGGCTGGTCCTTGTCCTTGGGCAGCACGTCAAAGTGGTGGCACAGCACCCACAGGCTGTGCTCGATCTCCTCCAGCTTCCGGGCGTGCTGCTCGTTGGTGATGTGGTCCGGCAGGACGGGGCGCTTGTAGCGTCGGTCGGCCGTCGTGGTGGCCACGTCGAAAAAGACGATCGCCGGACACGACCGAAGCCCATATCGTCGTCCTCGGACTCGGACTCTTCCTTCTTCTCCTCCTTGGCGGCGGCAGCCGGAGCGgccgaagcagcagcagcagccggggCAGCGACCGCGGCGAACTTGCTCGGGTCCTTGATGAACTCCTTGACCGTTTCGGCCTCCTTGAACTCGACCTCGGTGACGGCGGCGATGGCCAGCAGGTTGCGGAAACCGTTGGCAATGCTGTGCGGCACGGAAGCCAGCGTCGGATCTTCCGGCTTGATGTCCAGAATCTCCGGCGAGAAGATCGAACCAGAGTCGTACACCTGCTCAATCTGCAGACCGTACGAGAACGGCGAGATGTTCAACATGTTGAGCAGCGTGGCCTCGGAAGCTCCGACCTTGTCTCCGGGCTTCAGAATGGGCACATCGTTGATGATTTCAATCGTACCCTTGGAAATCTTGGTCGGGATGGACAGCGCCTGGAAGAAGGAGGTCTTCTCGGGGCCGAGACCGGTGTTCTGGGCCGGGATGATGACCTCCAGCGGAGCGATGGCACCAGCACGAGCCGGGGCACGCACCTTGCTCTCCATCAGCTTGTCGCGGATGTCGGCCAGATCGCCCTTGGTGAACACGAAGCCGACGTTGCCGCGGATGTGCGGCAGCAGCTTCTCCAGGACGATGGCCGAGCCACGGAGCGAGATACGGATGGTCTGCATCTGGCGGGAACCGACATTGTCGGCGCCCACGATGAAGCACTTGGGGTACTCATCGAGCAGTTGCtCACCTTCGGAGCGCTTCCAAACAATGGAGGTAATCGACATGAACCTCGAGTACGACCTGGCCCGCATATGCCGGTGCTGCCGTCGCGACTCCCCGGATCTGCAACCCATCTTCCTGGACGGTGCCGCCGTCGCAGACGGCACCACGCTGTACGAAATGCTCGCCAGCTGCACCCAGAGCCAGCCGAACTTCAACGACGGCTTGCCGTCGCAGCTGTGCGGGGATTGCGTCTCGGAGGTGACCACGGCGTACGGGTTCCGCAAGCGGTACGAGCAGAGTGAGTTGCTGCTGCGGGAGTATCTGTCGCGGAGGAAGGTGGAGCCTGCGGCCTGCGGGGTGAAGGTGGAGGAGCTGTTTGACGTGAAGACGGAGCTGATCGTGGTGGAGACCGTtggggaggaggaggatgagTTGATGACGGTGGAGTTTGTGGAGGAGAGTGGGGAGGATGAGGATCAAGATTATGAGGTGGGGAGTTTGGACGAGATGATTGAGGAGTTGGAGGAGTTGAAGCCGCGGCCGAGGGGGCGGAAGGCGAATGGGTATTCGAAGATTAAGGGGGAAGGGTTTGGGTGCGATTCTTGCGAGCGGGTGTTTGCGGATCGTCGGGGGATTACGAACCACGTGAAGCAGCATGAAAGGAAGGAGGTGAAGCAGTGTCCGCTGTGCAGCCGGGAGTTTACCTCGTCGTATCACTTGAATAGGCACGTGAAGATGCACGAAAACGACACGGATTGCGGGGTTTGCGGGAGGAAGTTTGGGCTGTATCATGACTACAAGGACCACATGGCGGTGGAACATCCGGGGGAGGCGTTGGTGGAACCGAAGAAGTCGGAGCGGTCGGAGCGTGAGCTGGCTCTCACGTTGACGGCGGAGCTGTTGGAGGATCCGGGCAGGATGGAAGCGATTTGTCGGATTTGTGACGCCACGTTTGAGCGGATAGCGCAGCTGAGGAGGCATCTGCGGACGCACGAGGATGTGAAGTCGTTTGAGAACgtcaacatcgccaacaagccGTACCTGTTTGAGGAAGGTTACGTGCTGGAGAACTACCTCGAGTACCTGGTGCAGCAGGTTTGCAAGGGGAATCTGTTGCGATTCTACCAGATTGTCGAGCCTGACGGTGAGGAGTTGGAACTGAGCGATTCCGACACGGATGGTGAAGATGAGGAAGTGGTTCGACGCGAGCATGGTTGTGGCCTCTGTCAGCAGAGCTTCCCGCGGATTAAACTGCTCCGCGAGCACGCTAAAAGTTGCCATCGTCCGGAAGAATTGATCGGTTGCAAGCACTGCGCCCGAGGCTTCCCCAACACGACCCTCTTCATGCGGCACCTGCGCCAGCAGTGCGAAAACACCGTCAAGAAGTTCCACTGCACCTTTTGCAACGAAAAGTTCATGTGGCAAACCTCGCTCAACAAGCACGCCCAGCACCACCACAAACCCACGAAACCGCTCTGGGAGCGACCCGGCGACGAGTCCGGAACCTCAGCCGCGAACGAAGAATCCGCGAAAAAGTTCGTCTGCCAAGTCTGCTCCAAAGGCTTCCAGCGGCTGGAACACCTCGAGCGCCACATCAAGATCCACATCCCGTCGGAGAAAAAGTTCGAATGCCCCGTCTGCCACAAAAAGTTCAACCGCAAGGACAACCTCCGCTCGCACCTCAAAATCCATCAAAAAGACCCCGACGCGGACGCCGACCCCGCCAACAAGCAGAACCAACTGTGCGTCTACTGCGGCCGCGGCTTCTCCAACTCCTCCAACCTCATCGTCCACATGCGACGCCACACCGGCGAACGCCCCTACCGCTGCGACATCTGCGACAAGGGCTTCCCCCGCTCCTCGGACCTCCAGTGCCACCGCCGAACGCACACCGGCGAAAAGCCCTGTCTCTGCACCATCTGCGGCAAGGGCTTCTCCCGCTCCAACAAACTGGTCCGCCACATGCGCATCCACACCGGCGCCCGGCCCTACTCCTGCTCGTACTGCGACCGCGCCTTCACCCAGTCCAACGACCTCACCCTGCACATCCGGCGCCACACCGGCGAAAAACCCTACGTCTGCGGCGTCTGCAACGAGCGCTTCATCCAGGGCACCGCCCTCAAGGCCCACCAGCGCGCCACCGGCCACAACGACGACGGCGCCACCCAGCCGGAACGCTTCGCCGCAATCAGCGTCAACAACCCGCACCGGATGGGCGTGaacgggccgaaggccctgcgACAAAGCGCCACCGTCAAAGCGGTCAAGTCGCGCAAGAAGAAGGCGGCCGCCGCCGTAGAACCGATGACCGTCGTCGAGGAGGTGGTCGCGCCGCCACCGCAACCGTACGTCCCGACCGTGCCGTCGTACGTCATGCAGAACTACGACCTGACGGCCGGCGGGTTGTTTGCGCAGAGTTTTACCCAGCAGTAG
Protein Sequence
MDPSVDFDLAKLCRCCRKRGSGLQSIFTFVCKSGAATLHEMLLSCIPQSQLQPDDGLPEQLCSRCIAAVSSAYQFRKRFEESDGILRAYVKERGRQGESLLGGMSVKVELVDIKAEQIIVEANPLVEEEQEEQVEPVKVELRMDSDDGSEFVGDDNVDFSSEEEQYEEKPKVSGEKKRVRNRKKPDPSEYKECPTCGKKFDTKYHLDRHVRAHKNDTQCEHCEKRFSAMDYKDYRKHMLTDHPGMDIQPHRKSTDKSEARDDEGSDNVPSANEPDEDDEDKPAGKKKRAGKRRGANEYRECPICGKGFPSKYHLERHVKTHNNDTRCEFCDQQFSATAYKEYCEHMQLEHPGMPVQPHKKTKPIDNSLVEEFFKSIQQKEISCKLCDAKLERIAELRNHLRTHSDPSTLINAGIPTKTFLFAEGYVPDNYLDILVQQINNWDVQRFYQIVEPTGEELTLSDSDSDPEDLVQRVHTCFTCHQSFPRLKLLTDHAATSHNPEQLLTCQHCQQQGFPNNTILERHQRQQCANSAKKFLCAICNTKFMWQSSLDKHAAANHANPSADPQHDSGKRFLCPMCNKGFTQMHHLKRHVRGHVPSEKKFECPECHRKFHRKDNMKFHMRTHQPKREDEPPKQTHLCSLCGRGFTSNYNYVVHMRRHTGERPFKCDQCDKAFPRSLDLTYHKRTHTGDKPSVCNICGKAFSRHHRLVRHMRVHTGARPYACTYCDRTFTQSNDLTLHIRRHTGEKPYSCPICNERFIQGTALRAHQRSVGHITEETLLPVSNYGRSLLEGCRSLANRNSSDAPAEAQLAVLEVDFGAAFEQKVRHEEDSFERAAALSQGPPVGVDREQFDKVLVARGRVRRGTVFALANRDGHVPALVFGGALVQSDFESPSDFVRVQQRLGLSRAAGQEVRDREVALDELGHPFEVVISRNLLQSFTQHEGAPLGVRIQGDYGHAQLESAVRGKVAIVAQLGQGSERAAVDRPEATHFHRIAALEALEWRFVDEAHQQLETSHHATALARVDVQNQPVHVLAEAQLPRNTVLITDGGRARGIFHDSHTDDRRNLLGVVVLRQRHFHLRRLHVLRQPRHIEQLHQLILLLGLQALQQLPTFVPERPLDHLLHLLLRVERAHNFRKLPRQHRILLRRFFLRFRLVLVLGQHVKVVAQHPQAVLDLLQLPGVLLVGDVVRQDGALVASVGRRGGHVEKDDRRTRPKPISSSSDSDSSFFSSLAAAAGAAEAAAAAGAATAANLLGSLMNSLTVSASLNSTSVTAAMASRLRKPLAMLCGTEASVGSSGLMSRISGEKIEPESYTCSICRPYENGEMFNMLSSVASEAPTLSPGFRMGTSLMISIVPLEILVGMDSAWKKEVFSGPRPVFWAGMMTSSGAMAPARAGARTLLSISLSRMSARSPLVNTKPTLPRMCGSSFSRTMAEPRSEIRMVCIWREPTLSAPTMKHLGYSSSSCSPSERFQTMEVIDMNLEYDLARICRCCRRDSPDLQPIFLDGAAVADGTTLYEMLASCTQSQPNFNDGLPSQLCGDCVSEVTTAYGFRKRYEQSELLLREYLSRRKVEPAACGVKVEELFDVKTELIVVETVGEEEDELMTVEFVEESGEDEDQDYEVGSLDEMIEELEELKPRPRGRKANGYSKIKGEGFGCDSCERVFADRRGITNHVKQHERKEVKQCPLCSREFTSSYHLNRHVKMHENDTDCGVCGRKFGLYHDYKDHMAVEHPGEALVEPKKSERSERELALTLTAELLEDPGRMEAICRICDATFERIAQLRRHLRTHEDVKSFENVNIANKPYLFEEGYVLENYLEYLVQQVCKGNLLRFYQIVEPDGEELELSDSDTDGEDEEVVRREHGCGLCQQSFPRIKLLREHAKSCHRPEELIGCKHCARGFPNTTLFMRHLRQQCENTVKKFHCTFCNEKFMWQTSLNKHAQHHHKPTKPLWERPGDESGTSAANEESAKKFVCQVCSKGFQRLEHLERHIKIHIPSEKKFECPVCHKKFNRKDNLRSHLKIHQKDPDADADPANKQNQLCVYCGRGFSNSSNLIVHMRRHTGERPYRCDICDKGFPRSSDLQCHRRTHTGEKPCLCTICGKGFSRSNKLVRHMRIHTGARPYSCSYCDRAFTQSNDLTLHIRRHTGEKPYVCGVCNERFIQGTALKAHQRATGHNDDGATQPERFAAISVNNPHRMGVNGPKALRQSATVKAVKSRKKKAAAAVEPMTVVEEVVAPPPQPYVPTVPSYVMQNYDLTAGGLFAQSFTQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00400795;
90% Identity
iTF_00400795;
80% Identity
-