Cqui009248.1
Basic Information
- Insect
- Culex quinquefasciatus
- Gene Symbol
- Hr39
- Assembly
- GCA_015732765.1
- Location
- NC:220074775-220115849[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.31 2.3e+03 -2.6 0.4 149 160 43 53 9 66 0.41 2 4 2 1.5e+04 -7.2 9.4 124 156 193 222 124 314 0.54 3 4 4.1e-09 3e-05 23.3 0.1 1 129 447 582 447 597 0.60 4 4 7.7e-76 5.7e-72 243.1 0.2 190 408 589 806 571 806 0.92
Sequence Information
- Coding Sequence
- ATGACATCAACGGAGTCGCGCGGAAACGTCTCGGTGACGACGATCAACTGCGAGAATGAAAATCCGGCGTCCAGCAGCAGTGCGTCCGTGGGGGCGCCCTTGGGGACGGGATCGGGAGGAGGGAGCagcagtagtagtagtagtagcagTAGCAACAGTAGCAGCACCAGCAATACACCGAATCCGTCGACCGGTGGTTCCGGAACAATCTTCGGGAACGTCGGGATTCGGATAACCGTGCCAAAAATGGAAGAATCCGATGAGTCTGATACGGAACTATCAAACATTGAAAAGACAGCAAAGGTAAGCATGAGGGATGACAGTCGAGCTAGCAAAGGACTGCCGCGGCCAATGTCCTGGGAGGGTGAACTGTCCGAACCGGAAGCGATGATGATTGATAACGAAAATAGTTCTACGGGAGATATGAAGCCAGAACCGCTGATCGTGGTGGCCAAGGAGGAGCCAAGTGGTCCCGGGATTACAGAACCGTTAGCGTTGACCGCAAATCACAGCAGTAGCAGTTCTCCGCTGCCAGGACGAGCAATCAAACCGGAAGTGGGCATTCCGTTAATAAGCCACCATCATCACAACAGCGTTGCGTCCAGCTACGCCAATTCCATTCCAACTAGCAGTAGTAGTAGCAGTAGTATTAACGCTAAGAAACTCCCGGACGTGATCAACCTGAAGTACGAACACGATAACCTACCGGCGGTACACTCTCCGCTGCTGGTCCGCTCCAAGACGACTCTGCTGCCGGCCAACCCCAGTCCGGACTCTGCCATCCATTCGGTGTACACGCACAGTTCGCCCAGTCAGTCGCCGCTCACGTCTCGCCATGCACCGTACACTCCGTCGCTGAGCCGAAACAACAGCGATGCGTCCCACAGCAGCTGCTACTCGTACAGTTCCGAGTTCAGCCCGACGCACTCGCCCATCCAGGGACGACACAACATGTTCGCGGCGGCGGCCGGCGGATCCTACAACGGGTCCCCGCTGCATCACTCAGTATTATACAAGCCGATGATCGACAACGAACAGGCGCTGAAGCTGGCCGGCCAGGAGGAACCGATCTTCGACAGCGAACATCTACCGTCCCCGGGAATCTCCCGACAGCAGCTGATCAACAGTCCCTGCCCTATCTGCGGCGACAAGATCTCCGGCTTTCACTACGGCATCTTCTCGTGCGAGTCGTGCAAAGGCTTCTTCAAGCGGACGGTCCAGAACAGGAAGAACTACGTGTGCCTTAGGGGGGCGTCCTGCCCGGTCACGATCGCCACCCGGAAAAAGTGTCCCGCCTGTCGATTCGAGAAGTGCCTTCAGAAGGGGATGAAGCTGGAAGCTATTCGCGAGGATCGCACCCGCGGTGGTCGATCGACGTATCAGTGCTCGTACACGCTGCCTGGTACGATCCTGAGCCCGTCCCTGTCCGGCGAGGGCAACAACTTCCCGTACTCGAACAGCCACGGCCAGCGCGGTCAGTACCCGCCGGGCATTTCCGGGCTGGTCATCAGCCAGCAACAGATGAAACTCGAGTGCCAGCAGGACATCAACAGCAACTCGAGTCCTGGCGGTGGGTCGAACGGCGTGCGACCGGGCGTTCCACAGCTGCTGCAGGTGAGTTTTTTTACAGGCCGGCAGCGCAAATTAGAGGCTGACGATCGCTATCGTTCGCAGGAAATCATGGACGTGGAACACCTGTGGCAGTACAACGCCGCCGAGCTGGCACGGCTGAATCAGCCTGCACCGCCGGTGGATCGCGCCGCGATCGCAGCGAACCCGCTGCTCTCCAGTGCCGGCATCTCGAGCGAAAGCAGCCCCGATCTGATCGCGAACCTGTGCAACATTGCCGACCACCGGCTGTACAAGATCGTCAAGTGGTGCAAGAGTCTGCCACTGTTTAAGAACATTTCGATCGACGACCAGATCTGCCTGCTGATCAACTCGTGGTGTGAGTTGCTGCTGTTTTCGTGTTGCTTCCGATCGATGGCGACTCCCGGAGAGATTAAGATCTCGCTCGGCAAGTCGATCACGTTGGAACAGGCCAAGCACAGCGGGCTACAGACCTGCATCGAACGAATGCTCAATCTGACCGATCACCTGCGGCGACTGCGCGTCGATCGGTACGAGTACGTCGCCATGAAGGTGATCGTGCTGCTGTCGTCGGACACGTCGGAGCTCAAGGAGTCGGAGAAGGTACGGGCCAGCCAGGAGAAGGCCTTGCAAGCGCTGCAGGCGTACACGTTGGCCCACTATCCGGAGACGCCGGCCAAGTTTGGCGAGCTGCTGCTCCGGATTCCGGAACTGCAGCGCACCTGTCAGCTCTCGTTTCAGGTGGGCAAGGAAATGCTGACGATCAAACCCAAGGACGGCGAGGAGCCGTCCTTTAACCTGCTGATGGAACTGCTCCGTGGCGAGCACTAA
- Protein Sequence
- MTSTESRGNVSVTTINCENENPASSSSASVGAPLGTGSGGGSSSSSSSSSSNSSSTSNTPNPSTGGSGTIFGNVGIRITVPKMEESDESDTELSNIEKTAKVSMRDDSRASKGLPRPMSWEGELSEPEAMMIDNENSSTGDMKPEPLIVVAKEEPSGPGITEPLALTANHSSSSSPLPGRAIKPEVGIPLISHHHHNSVASSYANSIPTSSSSSSSINAKKLPDVINLKYEHDNLPAVHSPLLVRSKTTLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHNMFAAAAGGSYNGSPLHHSVLYKPMIDNEQALKLAGQEEPIFDSEHLPSPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGASCPVTIATRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPGTILSPSLSGEGNNFPYSNSHGQRGQYPPGISGLVISQQQMKLECQQDINSNSSPGGGSNGVRPGVPQLLQVSFFTGRQRKLEADDRYRSQEIMDVEHLWQYNAAELARLNQPAPPVDRAAIAANPLLSSAGISSESSPDLIANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMATPGEIKISLGKSITLEQAKHSGLQTCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLSSDTSELKESEKVRASQEKALQALQAYTLAHYPETPAKFGELLLRIPELQRTCQLSFQVGKEMLTIKPKDGEEPSFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00400673;
- 90% Identity
- iTF_00400673;
- 80% Identity
- iTF_00401803;